Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 AC008752.3-201ENST00000588113 712 ntBASIC2.94□□□□□ -1.94
CLK1P49759 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC2.94□□□□□ -1.94
CLK1P49759 AC068790.3-201ENST00000602988 553 ntBASIC2.94□□□□□ -1.94
CLK1P49759 AC012507.3-201ENST00000603556 477 ntBASIC2.94□□□□□ -1.94
CLK1P49759 AC025449.1-201ENST00000603896 529 ntBASIC2.94□□□□□ -1.94
CLK1P49759 AC007621.1-201ENST00000604544 437 ntBASIC2.94□□□□□ -1.94
CLK1P49759 LARP7P1-201ENST00000605576 316 ntBASIC2.94□□□□□ -1.94
CLK1P49759 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC2.94□□□□□ -1.94
CLK1P49759 AC093788.1-201ENST00000609356 927 ntBASIC2.94□□□□□ -1.94
CLK1P49759 AL020991.1-201ENST00000612314 373 ntBASIC2.94□□□□□ -1.94
CLK1P49759 SCARNA17.4-201ENST00000614296 143 ntBASIC2.94□□□□□ -1.94
CLK1P49759 SRP54-214ENST00000630962 162 ntTSL 5 BASIC2.94□□□□□ -1.94
CLK1P49759 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.94□□□□□ -1.94
CLK1P49759 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
CLK1P49759 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
CLK1P49759 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC2.94□□□□□ -1.94
CLK1P49759 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
CLK1P49759 SNORA71.3-201ENST00000362582 128 ntBASIC2.93□□□□□ -1.94
CLK1P49759 Y_RNA.381-201ENST00000365666 102 ntBASIC2.93□□□□□ -1.94
CLK1P49759 RNU6-1072P-201ENST00000384703 107 ntBASIC2.93□□□□□ -1.94
CLK1P49759 RNU6-443P-201ENST00000384780 107 ntBASIC2.93□□□□□ -1.94
CLK1P49759 MIR670-201ENST00000390142 98 ntBASIC2.93□□□□□ -1.94
CLK1P49759 RNA5SP229-201ENST00000410809 99 ntBASIC2.93□□□□□ -1.94
CLK1P49759 UBE2FP1-201ENST00000416536 447 ntBASIC2.93□□□□□ -1.94
CLK1P49759 RPS15AP12-201ENST00000419498 388 ntBASIC2.93□□□□□ -1.94
CLK1P49759 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC2.93□□□□□ -1.94
CLK1P49759 AC119618.1-201ENST00000434191 222 ntBASIC2.93□□□□□ -1.94
CLK1P49759 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC2.93□□□□□ -1.94
CLK1P49759 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC2.93□□□□□ -1.94
CLK1P49759 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC2.93□□□□□ -1.94
CLK1P49759 TPT1P14-201ENST00000448018 505 ntBASIC2.93□□□□□ -1.94
CLK1P49759 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC2.93□□□□□ -1.94
CLK1P49759 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
CLK1P49759 SCARNA24.1-201ENST00000516465 137 ntBASIC2.93□□□□□ -1.94
CLK1P49759 RNU6-835P-201ENST00000516974 104 ntBASIC2.93□□□□□ -1.94
CLK1P49759 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.93□□□□□ -1.94
CLK1P49759 ADI1P3-201ENST00000549509 470 ntBASIC2.93□□□□□ -1.94
CLK1P49759 AL359212.1-201ENST00000556608 614 ntBASIC2.93□□□□□ -1.94
CLK1P49759 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC2.93□□□□□ -1.94
CLK1P49759 AC060780.3-201ENST00000589464 80 ntBASIC2.93□□□□□ -1.94
CLK1P49759 AC012493.2-201ENST00000595083 291 ntBASIC2.93□□□□□ -1.94
CLK1P49759 AC103710.2-201ENST00000609912 942 ntBASIC2.93□□□□□ -1.94
CLK1P49759 AC025253.1-201ENST00000613623 543 ntBASIC2.93□□□□□ -1.94
CLK1P49759 AC084757.4-201ENST00000616350 526 ntBASIC2.93□□□□□ -1.94
CLK1P49759 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC2.93□□□□□ -1.94
CLK1P49759 AC112204.3-201ENST00000623822 332 ntBASIC2.93□□□□□ -1.94
CLK1P49759 AC009161.2-201ENST00000624626 138 ntBASIC2.93□□□□□ -1.94
CLK1P49759 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.93□□□□□ -1.94
CLK1P49759 Z82209.1-201ENST00000422141 2135 ntBASIC2.93□□□□□ -1.94
CLK1P49759 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.93□□□□□ -1.94
CLK1P49759 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
CLK1P49759 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
CLK1P49759 AC110491.1-201ENST00000562191 2010 ntBASIC2.92□□□□□ -1.94
CLK1P49759 CASC19-280ENST00000642102 1351 ntBASIC2.92□□□□□ -1.94
CLK1P49759 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC2.92□□□□□ -1.94
CLK1P49759 RNU1-70P-201ENST00000362618 164 ntBASIC2.92□□□□□ -1.94
CLK1P49759 RNU5A-8P-201ENST00000364102 114 ntBASIC2.92□□□□□ -1.94
CLK1P49759 RNU6-108P-201ENST00000365558 107 ntBASIC2.92□□□□□ -1.94
CLK1P49759 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC2.92□□□□□ -1.94
CLK1P49759 Y_RNA.573-201ENST00000384763 105 ntBASIC2.92□□□□□ -1.94
CLK1P49759 MIR34B-201ENST00000385076 84 ntBASIC2.92□□□□□ -1.94
CLK1P49759 MT-TL1-201ENST00000386347 75 ntBASIC2.92□□□□□ -1.94
CLK1P49759 BX323014.1-201ENST00000412876 237 ntBASIC2.92□□□□□ -1.94
CLK1P49759 AL158156.1-201ENST00000422509 473 ntBASIC2.92□□□□□ -1.94
CLK1P49759 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC2.92□□□□□ -1.94
CLK1P49759 YME1L1P1-201ENST00000429435 297 ntBASIC2.92□□□□□ -1.94
CLK1P49759 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.92□□□□□ -1.94
CLK1P49759 RPL23AP30-201ENST00000432419 501 ntBASIC2.92□□□□□ -1.94
CLK1P49759 SNRPEP9-201ENST00000436794 238 ntBASIC2.92□□□□□ -1.94
CLK1P49759 AC006028.1-201ENST00000438379 402 ntBASIC2.92□□□□□ -1.94
CLK1P49759 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC2.92□□□□□ -1.94
CLK1P49759 MTND5P20-201ENST00000448677 143 ntBASIC2.92□□□□□ -1.94
CLK1P49759 RPL37P4-201ENST00000448908 268 ntBASIC2.92□□□□□ -1.94
CLK1P49759 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC2.92□□□□□ -1.94
CLK1P49759 AC008155.2-201ENST00000464337 397 ntBASIC2.92□□□□□ -1.94
CLK1P49759 RN7SL807P-201ENST00000470923 297 ntBASIC2.92□□□□□ -1.94
CLK1P49759 AC083798.1-201ENST00000472671 131 ntBASIC2.92□□□□□ -1.94
CLK1P49759 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC2.92□□□□□ -1.94
CLK1P49759 AC114781.4-201ENST00000513707 639 ntBASIC2.92□□□□□ -1.94
CLK1P49759 RN7SKP43-201ENST00000516173 320 ntBASIC2.92□□□□□ -1.94
CLK1P49759 RNU6-1281P-201ENST00000516223 105 ntBASIC2.92□□□□□ -1.94
CLK1P49759 Y_RNA.702-201ENST00000516843 96 ntBASIC2.92□□□□□ -1.94
CLK1P49759 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC2.92□□□□□ -1.94
CLK1P49759 AP001646.1-201ENST00000527936 915 ntBASIC2.92□□□□□ -1.94
CLK1P49759 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
CLK1P49759 AC007151.1-201ENST00000572774 483 ntBASIC2.92□□□□□ -1.94
CLK1P49759 MIR4658-201ENST00000584344 65 ntBASIC2.92□□□□□ -1.94
CLK1P49759 AC091135.1-201ENST00000585943 307 ntBASIC2.92□□□□□ -1.94
CLK1P49759 AC069234.5-201ENST00000611056 416 ntBASIC2.92□□□□□ -1.94
CLK1P49759 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC2.92□□□□□ -1.94
CLK1P49759 FER-210ENST00000628534 558 ntTSL 5 BASIC2.92□□□□□ -1.94
CLK1P49759 MIR7157-201ENST00000635801 60 ntBASIC2.92□□□□□ -1.94
CLK1P49759 MIR3199-2-201ENST00000636243 86 ntBASIC2.92□□□□□ -1.94
CLK1P49759 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
CLK1P49759 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.92□□□□□ -1.94
CLK1P49759 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.92□□□□□ -1.94
CLK1P49759 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
CLK1P49759 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.91□□□□□ -1.94
CLK1P49759 Y_RNA.70-201ENST00000362886 110 ntBASIC2.91□□□□□ -1.94
CLK1P49759 RNU6-451P-201ENST00000362921 107 ntBASIC2.91□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 115.8 ms