Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 AC116347.2-201ENST00000514912 523 ntBASIC1.93□□□□□ -2.1
CXCL12P48061 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC1.93□□□□□ -2.1
CXCL12P48061 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC1.93□□□□□ -2.1
CXCL12P48061 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC1.93□□□□□ -2.1
CXCL12P48061 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC1.93□□□□□ -2.1
CXCL12P48061 AC087241.2-201ENST00000535801 324 ntBASIC1.93□□□□□ -2.1
CXCL12P48061 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC1.93□□□□□ -2.1
CXCL12P48061 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC1.93□□□□□ -2.1
CXCL12P48061 AL356432.3-201ENST00000568952 465 ntBASIC1.93□□□□□ -2.1
CXCL12P48061 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC1.93□□□□□ -2.1
CXCL12P48061 AP000403.1-201ENST00000603349 851 ntBASIC1.93□□□□□ -2.1
CXCL12P48061 AC112187.2-201ENST00000604345 283 ntBASIC1.93□□□□□ -2.1
CXCL12P48061 AC108747.1-201ENST00000609508 535 ntBASIC1.93□□□□□ -2.1
CXCL12P48061 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC1.93□□□□□ -2.1
CXCL12P48061 AP003399.1-201ENST00000637534 361 ntBASIC1.93□□□□□ -2.1
CXCL12P48061 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
CXCL12P48061 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
CXCL12P48061 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC1.92□□□□□ -2.1
CXCL12P48061 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC1.92□□□□□ -2.1
CXCL12P48061 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC1.92□□□□□ -2.1
CXCL12P48061 Y_RNA.269-201ENST00000364685 89 ntBASIC1.92□□□□□ -2.1
CXCL12P48061 RPS20P2-201ENST00000402520 389 ntBASIC1.92□□□□□ -2.1
CXCL12P48061 RNU6-193P-201ENST00000410977 107 ntBASIC1.92□□□□□ -2.1
CXCL12P48061 RNA5SP270-201ENST00000411361 118 ntBASIC1.92□□□□□ -2.1
CXCL12P48061 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC1.92□□□□□ -2.1
CXCL12P48061 AC010099.3-201ENST00000423896 409 ntBASIC1.92□□□□□ -2.1
CXCL12P48061 AL593851.1-201ENST00000426171 157 ntBASIC1.92□□□□□ -2.1
CXCL12P48061 TIMM9P1-201ENST00000436122 256 ntBASIC1.92□□□□□ -2.1
CXCL12P48061 AL008629.1-201ENST00000438615 184 ntBASIC1.92□□□□□ -2.1
CXCL12P48061 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC1.92□□□□□ -2.1
CXCL12P48061 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC1.92□□□□□ -2.1
CXCL12P48061 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC1.92□□□□□ -2.1
CXCL12P48061 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC1.92□□□□□ -2.1
CXCL12P48061 RPL31P41-201ENST00000477967 372 ntBASIC1.92□□□□□ -2.1
CXCL12P48061 RPL23AP41-201ENST00000484754 458 ntBASIC1.92□□□□□ -2.1
CXCL12P48061 AL163540.1-201ENST00000485382 386 ntBASIC1.92□□□□□ -2.1
CXCL12P48061 AC114786.4-201ENST00000508771 728 ntBASIC1.92□□□□□ -2.1
CXCL12P48061 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC1.92□□□□□ -2.1
CXCL12P48061 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC1.92□□□□□ -2.1
CXCL12P48061 RN7SKP258-201ENST00000517151 304 ntBASIC1.92□□□□□ -2.1
CXCL12P48061 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC1.92□□□□□ -2.1
CXCL12P48061 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC1.92□□□□□ -2.1
CXCL12P48061 AC123904.2-201ENST00000548059 300 ntBASIC1.92□□□□□ -2.1
CXCL12P48061 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC1.92□□□□□ -2.1
CXCL12P48061 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC1.92□□□□□ -2.1
CXCL12P48061 AC090616.3-201ENST00000582184 217 ntBASIC1.92□□□□□ -2.1
CXCL12P48061 AC008751.2-201ENST00000597885 980 ntBASIC1.92□□□□□ -2.1
CXCL12P48061 AC004805.2-201ENST00000605382 482 ntBASIC1.92□□□□□ -2.1
CXCL12P48061 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC1.92□□□□□ -2.1
CXCL12P48061 AC239868.4-201ENST00000608318 671 ntBASIC1.92□□□□□ -2.1
CXCL12P48061 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC1.92□□□□□ -2.1
CXCL12P48061 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC1.92□□□□□ -2.1
CXCL12P48061 AC084768.2-201ENST00000622736 221 ntBASIC1.92□□□□□ -2.1
CXCL12P48061 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
CXCL12P48061 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
CXCL12P48061 RNU6-1167P-201ENST00000363227 94 ntBASIC1.91□□□□□ -2.1
CXCL12P48061 RNY1P10-201ENST00000363268 113 ntBASIC1.91□□□□□ -2.1
CXCL12P48061 Y_RNA.245-201ENST00000364493 95 ntBASIC1.91□□□□□ -2.1
CXCL12P48061 RNU6-809P-201ENST00000384461 107 ntBASIC1.91□□□□□ -2.1
CXCL12P48061 AC023141.4-201ENST00000412031 328 ntBASIC1.91□□□□□ -2.1
CXCL12P48061 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC1.91□□□□□ -2.1
CXCL12P48061 RPL23AP39-201ENST00000415533 405 ntBASIC1.91□□□□□ -2.1
CXCL12P48061 MTND1P23-201ENST00000416931 372 ntBASIC1.91□□□□□ -2.1
CXCL12P48061 USP9YP13-201ENST00000417797 480 ntBASIC1.91□□□□□ -2.1
CXCL12P48061 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC1.91□□□□□ -2.1
CXCL12P48061 ELOCP14-201ENST00000428070 331 ntBASIC1.91□□□□□ -2.1
CXCL12P48061 MTND1P28-201ENST00000435623 950 ntBASIC1.91□□□□□ -2.1
CXCL12P48061 RPL37P21-201ENST00000435890 276 ntBASIC1.91□□□□□ -2.1
CXCL12P48061 SNRPEP9-201ENST00000436794 238 ntBASIC1.91□□□□□ -2.1
CXCL12P48061 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC1.91□□□□□ -2.1
CXCL12P48061 ELOCP7-201ENST00000439968 331 ntBASIC1.91□□□□□ -2.1
CXCL12P48061 AC003989.2-201ENST00000440224 169 ntBASIC1.91□□□□□ -2.1
CXCL12P48061 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC1.91□□□□□ -2.1
CXCL12P48061 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC1.91□□□□□ -2.1
CXCL12P48061 AL139109.1-201ENST00000455491 297 ntBASIC1.91□□□□□ -2.1
CXCL12P48061 AC108059.3-201ENST00000456388 214 ntBASIC1.91□□□□□ -2.1
CXCL12P48061 RPL26P9-201ENST00000457466 433 ntBASIC1.91□□□□□ -2.1
CXCL12P48061 AC013267.1-201ENST00000458227 267 ntBASIC1.91□□□□□ -2.1
CXCL12P48061 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC1.91□□□□□ -2.1
CXCL12P48061 RPF2P2-201ENST00000504693 896 ntBASIC1.91□□□□□ -2.1
CXCL12P48061 AC108078.2-201ENST00000510750 236 ntBASIC1.91□□□□□ -2.1
CXCL12P48061 MRPS36P2-201ENST00000512569 299 ntBASIC1.91□□□□□ -2.1
CXCL12P48061 SNORA3.4-201ENST00000515969 96 ntBASIC1.91□□□□□ -2.1
CXCL12P48061 RNU6-678P-201ENST00000516832 109 ntBASIC1.91□□□□□ -2.1
CXCL12P48061 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC1.91□□□□□ -2.1
CXCL12P48061 PRELID2P1-201ENST00000552837 301 ntBASIC1.91□□□□□ -2.1
CXCL12P48061 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC1.91□□□□□ -2.1
CXCL12P48061 MIR5002-201ENST00000584713 97 ntBASIC1.91□□□□□ -2.1
CXCL12P48061 SNRPGP19-201ENST00000603826 189 ntBASIC1.91□□□□□ -2.1
CXCL12P48061 AC008498.1-201ENST00000613012 531 ntBASIC1.91□□□□□ -2.1
CXCL12P48061 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC1.91□□□□□ -2.1
CXCL12P48061 AC023510.2-201ENST00000622162 746 ntBASIC1.91□□□□□ -2.1
CXCL12P48061 AC017037.3-201ENST00000625016 472 ntBASIC1.91□□□□□ -2.1
CXCL12P48061 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC1.91□□□□□ -2.1
CXCL12P48061 AL512643.1-201ENST00000635735 524 ntBASIC1.91□□□□□ -2.1
CXCL12P48061 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC1.91□□□□□ -2.1
CXCL12P48061 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC1.9□□□□□ -2.1
CXCL12P48061 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC1.9□□□□□ -2.1
CXCL12P48061 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.9□□□□□ -2.11
CXCL12P48061 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC1.9□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 126.2 ms