Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 SNORD56.2-201ENST00000363242 71 ntBASIC2.56□□□□□ -2
BRCC3P46736 SMIM11P1-201ENST00000369586 178 ntBASIC2.56□□□□□ -2
BRCC3P46736 OR5H15-201ENST00000383696 930 ntBASIC2.56□□□□□ -2
BRCC3P46736 MIR888-201ENST00000401186 77 ntBASIC2.56□□□□□ -2
BRCC3P46736 AL139095.1-201ENST00000404326 391 ntBASIC2.56□□□□□ -2
BRCC3P46736 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC2.56□□□□□ -2
BRCC3P46736 MTND3P17-201ENST00000416968 344 ntBASIC2.56□□□□□ -2
BRCC3P46736 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC2.56□□□□□ -2
BRCC3P46736 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC2.56□□□□□ -2
BRCC3P46736 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC2.56□□□□□ -2
BRCC3P46736 AC007919.1-201ENST00000429380 217 ntBASIC2.56□□□□□ -2
BRCC3P46736 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.56□□□□□ -2
BRCC3P46736 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC2.56□□□□□ -2
BRCC3P46736 AC119618.1-201ENST00000434191 222 ntBASIC2.56□□□□□ -2
BRCC3P46736 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC2.56□□□□□ -2
BRCC3P46736 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.56□□□□□ -2
BRCC3P46736 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC2.56□□□□□ -2
BRCC3P46736 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC2.56□□□□□ -2
BRCC3P46736 MTND1P27-201ENST00000451117 902 ntBASIC2.56□□□□□ -2
BRCC3P46736 RPL36AP51-201ENST00000487216 318 ntBASIC2.56□□□□□ -2
BRCC3P46736 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC2.56□□□□□ -2
BRCC3P46736 TBCAP3-201ENST00000512475 312 ntBASIC2.56□□□□□ -2
BRCC3P46736 MTND3P5-201ENST00000512798 333 ntBASIC2.56□□□□□ -2
BRCC3P46736 RNA5SP281-201ENST00000516504 135 ntBASIC2.56□□□□□ -2
BRCC3P46736 RNA5SP471-201ENST00000516971 106 ntBASIC2.56□□□□□ -2
BRCC3P46736 RNU6-430P-201ENST00000517078 107 ntBASIC2.56□□□□□ -2
BRCC3P46736 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC2.56□□□□□ -2
BRCC3P46736 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC2.56□□□□□ -2
BRCC3P46736 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC2.56□□□□□ -2
BRCC3P46736 AC068135.2-201ENST00000569293 1028 ntBASIC2.56□□□□□ -2
BRCC3P46736 MIR5194-201ENST00000582634 120 ntBASIC2.56□□□□□ -2
BRCC3P46736 AL356575.1-201ENST00000603008 283 ntBASIC2.56□□□□□ -2
BRCC3P46736 AC007363.1-201ENST00000604736 620 ntBASIC2.56□□□□□ -2
BRCC3P46736 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC2.56□□□□□ -2
BRCC3P46736 AC099842.1-201ENST00000619919 596 ntBASIC2.56□□□□□ -2
BRCC3P46736 AC002064.3-201ENST00000623448 346 ntBASIC2.56□□□□□ -2
BRCC3P46736 AC110079.1-202ENST00000635213 138 ntBASIC2.56□□□□□ -2
BRCC3P46736 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.56□□□□□ -2
BRCC3P46736 FARSBP1-201ENST00000435808 1778 ntBASIC2.56□□□□□ -2
BRCC3P46736 Y_RNA.41-201ENST00000362646 102 ntBASIC2.55□□□□□ -2
BRCC3P46736 SNORA25.6-201ENST00000364121 118 ntBASIC2.55□□□□□ -2
BRCC3P46736 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.55□□□□□ -2
BRCC3P46736 SNORA20.2-201ENST00000383922 131 ntBASIC2.55□□□□□ -2
BRCC3P46736 RNU6-140P-201ENST00000384566 108 ntBASIC2.55□□□□□ -2
BRCC3P46736 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC2.55□□□□□ -2
BRCC3P46736 NDUFS5P1-201ENST00000405668 289 ntBASIC2.55□□□□□ -2
BRCC3P46736 RNU2-62P-201ENST00000410868 191 ntBASIC2.55□□□□□ -2
BRCC3P46736 AC114491.1-201ENST00000416095 246 ntBASIC2.55□□□□□ -2
BRCC3P46736 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.55□□□□□ -2
BRCC3P46736 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC2.55□□□□□ -2
BRCC3P46736 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.55□□□□□ -2
BRCC3P46736 ARPC3P1-201ENST00000437218 533 ntBASIC2.55□□□□□ -2
BRCC3P46736 RPS15AP9-201ENST00000439856 381 ntBASIC2.55□□□□□ -2
BRCC3P46736 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC2.55□□□□□ -2
BRCC3P46736 CR848007.1-201ENST00000442354 1699 ntBASIC2.55□□□□□ -2
BRCC3P46736 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC2.55□□□□□ -2
BRCC3P46736 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.55□□□□□ -2
BRCC3P46736 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC2.55□□□□□ -2
BRCC3P46736 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC2.55□□□□□ -2
BRCC3P46736 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC2.55□□□□□ -2
BRCC3P46736 AC090572.1-201ENST00000519251 160 ntBASIC2.55□□□□□ -2
BRCC3P46736 HMGB1P41-201ENST00000520234 440 ntBASIC2.55□□□□□ -2
BRCC3P46736 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC2.55□□□□□ -2
BRCC3P46736 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC2.55□□□□□ -2
BRCC3P46736 RPS3AP4-201ENST00000555161 764 ntBASIC2.55□□□□□ -2
BRCC3P46736 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC2.55□□□□□ -2
BRCC3P46736 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.55□□□□□ -2
BRCC3P46736 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC2.55□□□□□ -2
BRCC3P46736 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC2.55□□□□□ -2
BRCC3P46736 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC2.55□□□□□ -2
BRCC3P46736 AC087683.1-201ENST00000591187 441 ntBASIC2.55□□□□□ -2
BRCC3P46736 AC091834.1-201ENST00000614543 472 ntBASIC2.55□□□□□ -2
BRCC3P46736 AC034102.8-201ENST00000615146 484 ntBASIC2.55□□□□□ -2
BRCC3P46736 AC136475.10-201ENST00000620253 385 ntBASIC2.55□□□□□ -2
BRCC3P46736 MIR1291-201ENST00000627649 87 ntBASIC2.55□□□□□ -2
BRCC3P46736 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.54□□□□□ -2
BRCC3P46736 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
BRCC3P46736 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC2.54□□□□□ -2
BRCC3P46736 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.54□□□□□ -2
BRCC3P46736 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.54□□□□□ -2
BRCC3P46736 U8.2-201ENST00000363156 134 ntBASIC2.54□□□□□ -2
BRCC3P46736 RNU1-105P-201ENST00000363470 161 ntBASIC2.54□□□□□ -2
BRCC3P46736 Y_RNA.559-201ENST00000384686 107 ntBASIC2.54□□□□□ -2
BRCC3P46736 SNORD116-4-201ENST00000384733 96 ntBASIC2.54□□□□□ -2
BRCC3P46736 MIR592-201ENST00000384959 97 ntBASIC2.54□□□□□ -2
BRCC3P46736 RNU2-66P-201ENST00000410650 161 ntBASIC2.54□□□□□ -2
BRCC3P46736 AL096701.2-201ENST00000416920 238 ntBASIC2.54□□□□□ -2
BRCC3P46736 MORF4L1P6-201ENST00000418771 268 ntBASIC2.54□□□□□ -2
BRCC3P46736 ELOCP4-201ENST00000420090 333 ntBASIC2.54□□□□□ -2
BRCC3P46736 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.54□□□□□ -2
BRCC3P46736 AC104651.1-201ENST00000427559 735 ntBASIC2.54□□□□□ -2
BRCC3P46736 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC2.54□□□□□ -2
BRCC3P46736 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC2.54□□□□□ -2
BRCC3P46736 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC2.54□□□□□ -2
BRCC3P46736 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.54□□□□□ -2
BRCC3P46736 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC2.54□□□□□ -2
BRCC3P46736 MTND2P33-201ENST00000506452 1031 ntBASIC2.54□□□□□ -2
BRCC3P46736 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC2.54□□□□□ -2
BRCC3P46736 Vault.3-201ENST00000516676 95 ntBASIC2.54□□□□□ -2
BRCC3P46736 SUB1P1-201ENST00000524415 382 ntBASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms