Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC0.23□□□□□ -2.37
HTTP42858 AC104108.1-201ENST00000509930 412 ntBASIC0.23□□□□□ -2.37
HTTP42858 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC0.23□□□□□ -2.37
HTTP42858 SNORA48.10-201ENST00000516965 160 ntBASIC0.23□□□□□ -2.37
HTTP42858 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC0.23□□□□□ -2.37
HTTP42858 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC0.23□□□□□ -2.37
HTTP42858 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC0.23□□□□□ -2.37
HTTP42858 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.23□□□□□ -2.37
HTTP42858 AL355812.1-201ENST00000603215 216 ntBASIC0.23□□□□□ -2.37
HTTP42858 AC025588.4-201ENST00000615802 908 ntBASIC0.23□□□□□ -2.37
HTTP42858 AC087821.2-201ENST00000637086 450 ntBASIC0.23□□□□□ -2.37
HTTP42858 SNORD118-201ENST00000363593 134 ntBASIC0.22□□□□□ -2.37
HTTP42858 RNU6ATAC2P-201ENST00000387943 126 ntBASIC0.22□□□□□ -2.37
HTTP42858 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC0.22□□□□□ -2.37
HTTP42858 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC0.22□□□□□ -2.37
HTTP42858 AL589880.1-201ENST00000448271 287 ntBASIC0.22□□□□□ -2.37
HTTP42858 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC0.22□□□□□ -2.37
HTTP42858 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC0.22□□□□□ -2.37
HTTP42858 MTND2P17-201ENST00000550281 688 ntBASIC0.22□□□□□ -2.37
HTTP42858 AC090115.3-201ENST00000553218 849 ntBASIC0.22□□□□□ -2.37
HTTP42858 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC0.22□□□□□ -2.37
HTTP42858 AC002545.1-201ENST00000592511 181 ntBASIC0.22□□□□□ -2.37
HTTP42858 TPTE2P4-201ENST00000258589 1605 ntBASIC0.22□□□□□ -2.37
HTTP42858 RNY3P5-201ENST00000384127 102 ntBASIC0.22□□□□□ -2.37
HTTP42858 MIR601-201ENST00000385256 79 ntBASIC0.22□□□□□ -2.37
HTTP42858 MIR1250-201ENST00000408098 113 ntBASIC0.22□□□□□ -2.37
HTTP42858 RPEP5-201ENST00000441137 268 ntBASIC0.22□□□□□ -2.37
HTTP42858 MIR4299-201ENST00000577899 72 ntBASIC0.22□□□□□ -2.37
HTTP42858 AC084824.5-201ENST00000612009 413 ntBASIC0.22□□□□□ -2.37
HTTP42858 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC0.22□□□□□ -2.37
HTTP42858 AC016716.1-201ENST00000265882 708 ntBASIC0.22□□□□□ -2.37
HTTP42858 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC0.22□□□□□ -2.37
HTTP42858 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC0.22□□□□□ -2.37
HTTP42858 RNU6-193P-201ENST00000410977 107 ntBASIC0.22□□□□□ -2.37
HTTP42858 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC0.22□□□□□ -2.37
HTTP42858 AC133963.2-201ENST00000513686 578 ntBASIC0.22□□□□□ -2.37
HTTP42858 RNU7-193P-201ENST00000516723 65 ntBASIC0.22□□□□□ -2.37
HTTP42858 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC0.22□□□□□ -2.37
HTTP42858 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC0.22□□□□□ -2.37
HTTP42858 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC0.22□□□□□ -2.37
HTTP42858 AC034236.3-201ENST00000605999 461 ntBASIC0.22□□□□□ -2.37
HTTP42858 AL132822.1-201ENST00000617063 513 ntBASIC0.22□□□□□ -2.37
HTTP42858 AC116563.2-201ENST00000624751 535 ntBASIC0.22□□□□□ -2.37
HTTP42858 SNORA4.1-201ENST00000364263 144 ntBASIC0.21□□□□□ -2.38
HTTP42858 RNU6-1184P-201ENST00000384588 108 ntBASIC0.21□□□□□ -2.38
HTTP42858 AGR3-202ENST00000402239 563 ntTSL 2 BASIC0.21□□□□□ -2.38
HTTP42858 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC0.21□□□□□ -2.38
HTTP42858 CR769776.1-201ENST00000441254 787 ntBASIC0.21□□□□□ -2.38
HTTP42858 HSPE1P13-201ENST00000451143 297 ntBASIC0.21□□□□□ -2.38
HTTP42858 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC0.21□□□□□ -2.38
HTTP42858 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC0.21□□□□□ -2.38
HTTP42858 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC0.21□□□□□ -2.38
HTTP42858 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.21□□□□□ -2.38
HTTP42858 AL021879.1-201ENST00000611756 288 ntBASIC0.21□□□□□ -2.38
HTTP42858 Y_RNA.804-201ENST00000615262 101 ntBASIC0.21□□□□□ -2.38
HTTP42858 Y_RNA.413-201ENST00000384007 102 ntBASIC0.21□□□□□ -2.38
HTTP42858 RNU6-452P-201ENST00000384406 107 ntBASIC0.21□□□□□ -2.38
HTTP42858 BTF3L4P2-201ENST00000392798 346 ntBASIC0.21□□□□□ -2.38
HTTP42858 RPL37P10-201ENST00000412884 288 ntBASIC0.21□□□□□ -2.38
HTTP42858 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC0.21□□□□□ -2.38
HTTP42858 TPTE2P6-202ENST00000445572 1007 ntBASIC0.21□□□□□ -2.38
HTTP42858 Y_RNA.754-201ENST00000476024 102 ntBASIC0.21□□□□□ -2.38
HTTP42858 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC0.21□□□□□ -2.38
HTTP42858 NAP1L1P1-201ENST00000524793 1063 ntBASIC0.21□□□□□ -2.38
HTTP42858 AL355877.2-201ENST00000603670 358 ntBASIC0.21□□□□□ -2.38
HTTP42858 AC018618.2-201ENST00000604770 446 ntBASIC0.21□□□□□ -2.38
HTTP42858 AC113194.1-201ENST00000606037 500 ntBASIC0.21□□□□□ -2.38
HTTP42858 Y_RNA.790-201ENST00000614282 102 ntBASIC0.21□□□□□ -2.38
HTTP42858 Y_RNA.782-201ENST00000614695 102 ntBASIC0.21□□□□□ -2.38
HTTP42858 AL138880.2-201ENST00000616214 239 ntBASIC0.21□□□□□ -2.38
HTTP42858 AC012676.2-201ENST00000619258 186 ntBASIC0.21□□□□□ -2.38
HTTP42858 RNU1-105P-201ENST00000363470 161 ntBASIC0.2□□□□□ -2.38
HTTP42858 HMGN2P22-201ENST00000427588 175 ntBASIC0.2□□□□□ -2.38
HTTP42858 TRGVB-201ENST00000453257 471 ntBASIC0.2□□□□□ -2.38
HTTP42858 ANKRD26P4-201ENST00000455755 950 ntBASIC0.2□□□□□ -2.38
HTTP42858 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC0.2□□□□□ -2.38
HTTP42858 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC0.2□□□□□ -2.38
HTTP42858 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC0.2□□□□□ -2.38
HTTP42858 AP003717.3-201ENST00000544832 1180 ntBASIC0.2□□□□□ -2.38
HTTP42858 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC0.2□□□□□ -2.38
HTTP42858 DUXAP10-204ENST00000612052 616 ntBASIC0.2□□□□□ -2.38
HTTP42858 AC022202.1-201ENST00000613515 211 ntBASIC0.2□□□□□ -2.38
HTTP42858 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC0.2□□□□□ -2.38
HTTP42858 DLEU1_2.1-201ENST00000617920 342 ntBASIC0.2□□□□□ -2.38
HTTP42858 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC0.2□□□□□ -2.38
HTTP42858 RNU4-9P-201ENST00000364951 139 ntBASIC0.2□□□□□ -2.38
HTTP42858 MIR493-201ENST00000385254 89 ntBASIC0.2□□□□□ -2.38
HTTP42858 AC023141.4-201ENST00000412031 328 ntBASIC0.2□□□□□ -2.38
HTTP42858 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC0.2□□□□□ -2.38
HTTP42858 EIF4EP4-201ENST00000424916 578 ntBASIC0.2□□□□□ -2.38
HTTP42858 SYPL1P1-201ENST00000473622 768 ntBASIC0.2□□□□□ -2.38
HTTP42858 RPL23AP54-201ENST00000495129 419 ntBASIC0.2□□□□□ -2.38
HTTP42858 MTATP6P22-201ENST00000507369 598 ntBASIC0.2□□□□□ -2.38
HTTP42858 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC0.2□□□□□ -2.38
HTTP42858 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC0.2□□□□□ -2.38
HTTP42858 AC068880.5-201ENST00000624331 290 ntBASIC0.2□□□□□ -2.38
HTTP42858 AC092192.1-201ENST00000633154 1018 ntBASIC0.2□□□□□ -2.38
HTTP42858 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC0.2□□□□□ -2.38
HTTP42858 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC0.2□□□□□ -2.38
HTTP42858 RNU6-220P-201ENST00000390919 107 ntBASIC0.2□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 126.5 ms