Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 AL670379.6-201ENST00000603753 252 ntBASIC3.45□□□□□ -1.86
CIITAP33076 AL670379.11-201ENST00000604059 253 ntBASIC3.45□□□□□ -1.86
CIITAP33076 AC008162.1-201ENST00000604718 254 ntBASIC3.45□□□□□ -1.86
CIITAP33076 AL670379.1-201ENST00000604752 252 ntBASIC3.45□□□□□ -1.86
CIITAP33076 AL670379.5-201ENST00000605253 252 ntBASIC3.45□□□□□ -1.86
CIITAP33076 AL670379.12-201ENST00000605291 253 ntBASIC3.45□□□□□ -1.86
CIITAP33076 AL670379.8-201ENST00000605353 252 ntBASIC3.45□□□□□ -1.86
CIITAP33076 AC005000.2-201ENST00000605468 310 ntBASIC3.45□□□□□ -1.86
CIITAP33076 AL670379.7-201ENST00000605823 252 ntBASIC3.45□□□□□ -1.86
CIITAP33076 AL589994.2-201ENST00000621124 579 ntBASIC3.45□□□□□ -1.86
CIITAP33076 AC091953.5-201ENST00000622919 233 ntBASIC3.45□□□□□ -1.86
CIITAP33076 FRG1KP-201ENST00000623592 341 ntBASIC3.45□□□□□ -1.86
CIITAP33076 API5P2-201ENST00000397055 1498 ntBASIC3.45□□□□□ -1.86
CIITAP33076 AL353743.1-202ENST00000431724 1695 ntBASIC3.45□□□□□ -1.86
CIITAP33076 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
CIITAP33076 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
CIITAP33076 FAM35BP-202ENST00000497389 3337 ntBASIC3.44□□□□□ -1.86
CIITAP33076 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.44□□□□□ -1.86
CIITAP33076 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CIITAP33076 Y_RNA.72-201ENST00000362894 103 ntBASIC3.44□□□□□ -1.86
CIITAP33076 Y_RNA.167-201ENST00000363735 109 ntBASIC3.44□□□□□ -1.86
CIITAP33076 RNU6-522P-201ENST00000364497 107 ntBASIC3.44□□□□□ -1.86
CIITAP33076 SNORA71.1-201ENST00000364523 117 ntBASIC3.44□□□□□ -1.86
CIITAP33076 MIR634-201ENST00000385208 97 ntBASIC3.44□□□□□ -1.86
CIITAP33076 AL138885.1-201ENST00000405921 675 ntBASIC3.44□□□□□ -1.86
CIITAP33076 RNU2-29P-201ENST00000410423 189 ntBASIC3.44□□□□□ -1.86
CIITAP33076 RNA5SP293-201ENST00000410527 113 ntBASIC3.44□□□□□ -1.86
CIITAP33076 Y_RNA.615-201ENST00000410769 117 ntBASIC3.44□□□□□ -1.86
CIITAP33076 RNU6-373P-201ENST00000411247 98 ntBASIC3.44□□□□□ -1.86
CIITAP33076 PDCL2P1-201ENST00000419302 352 ntBASIC3.44□□□□□ -1.86
CIITAP33076 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC3.44□□□□□ -1.86
CIITAP33076 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC3.44□□□□□ -1.86
CIITAP33076 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC3.44□□□□□ -1.86
CIITAP33076 CBWD4P-201ENST00000445695 655 ntBASIC3.44□□□□□ -1.86
CIITAP33076 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC3.44□□□□□ -1.86
CIITAP33076 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC3.44□□□□□ -1.86
CIITAP33076 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC3.44□□□□□ -1.86
CIITAP33076 RPS27P29-201ENST00000463110 252 ntBASIC3.44□□□□□ -1.86
CIITAP33076 AC117440.1-201ENST00000474107 571 ntBASIC3.44□□□□□ -1.86
CIITAP33076 RPL30P5-201ENST00000494923 336 ntBASIC3.44□□□□□ -1.86
CIITAP33076 CCDC34P1-201ENST00000507441 517 ntBASIC3.44□□□□□ -1.86
CIITAP33076 AC010265.1-201ENST00000513509 211 ntBASIC3.44□□□□□ -1.86
CIITAP33076 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC3.44□□□□□ -1.86
CIITAP33076 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.44□□□□□ -1.86
CIITAP33076 RNU6-390P-201ENST00000516259 103 ntBASIC3.44□□□□□ -1.86
CIITAP33076 RNA5SP503-201ENST00000517047 117 ntBASIC3.44□□□□□ -1.86
CIITAP33076 RNU6-685P-201ENST00000517088 95 ntBASIC3.44□□□□□ -1.86
CIITAP33076 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.44□□□□□ -1.86
CIITAP33076 AC078814.3-201ENST00000553036 491 ntBASIC3.44□□□□□ -1.86
CIITAP33076 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC3.44□□□□□ -1.86
CIITAP33076 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.44□□□□□ -1.86
CIITAP33076 DPPA3P3-201ENST00000603842 430 ntBASIC3.44□□□□□ -1.86
CIITAP33076 SDR42E1P2-201ENST00000614861 481 ntBASIC3.44□□□□□ -1.86
CIITAP33076 AC010133.1-201ENST00000615809 842 ntBASIC3.44□□□□□ -1.86
CIITAP33076 AL136221.1-201ENST00000621449 509 ntBASIC3.44□□□□□ -1.86
CIITAP33076 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
CIITAP33076 AC103988.1-201ENST00000566382 2177 ntBASIC3.44□□□□□ -1.86
CIITAP33076 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.43□□□□□ -1.86
CIITAP33076 AL137003.2-201ENST00000606924 2538 ntBASIC3.43□□□□□ -1.86
CIITAP33076 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
CIITAP33076 RNU6-845P-201ENST00000362578 103 ntBASIC3.43□□□□□ -1.86
CIITAP33076 U3.6-201ENST00000363622 211 ntBASIC3.43□□□□□ -1.86
CIITAP33076 Y_RNA.231-201ENST00000364358 102 ntBASIC3.43□□□□□ -1.86
CIITAP33076 RNU6-805P-201ENST00000365643 106 ntBASIC3.43□□□□□ -1.86
CIITAP33076 AL162578.1-201ENST00000406202 378 ntBASIC3.43□□□□□ -1.86
CIITAP33076 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC3.43□□□□□ -1.86
CIITAP33076 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.43□□□□□ -1.86
CIITAP33076 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.43□□□□□ -1.86
CIITAP33076 RPL7P46-201ENST00000425129 740 ntBASIC3.43□□□□□ -1.86
CIITAP33076 AL513185.2-201ENST00000425543 193 ntBASIC3.43□□□□□ -1.86
CIITAP33076 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC3.43□□□□□ -1.86
CIITAP33076 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC3.43□□□□□ -1.86
CIITAP33076 MTND4LP16-201ENST00000440828 295 ntBASIC3.43□□□□□ -1.86
CIITAP33076 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.43□□□□□ -1.86
CIITAP33076 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC3.43□□□□□ -1.86
CIITAP33076 MTND1P11-201ENST00000456661 876 ntBASIC3.43□□□□□ -1.86
CIITAP33076 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC3.43□□□□□ -1.86
CIITAP33076 RNU4-29P-201ENST00000515943 174 ntBASIC3.43□□□□□ -1.86
CIITAP33076 RN7SKP258-201ENST00000517151 304 ntBASIC3.43□□□□□ -1.86
CIITAP33076 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC3.43□□□□□ -1.86
CIITAP33076 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC3.43□□□□□ -1.86
CIITAP33076 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.43□□□□□ -1.86
CIITAP33076 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.43□□□□□ -1.86
CIITAP33076 AC005261.5-201ENST00000596280 355 ntBASIC3.43□□□□□ -1.86
CIITAP33076 AC063943.3-201ENST00000615562 356 ntBASIC3.43□□□□□ -1.86
CIITAP33076 AC100810.6-201ENST00000638068 285 ntBASIC3.43□□□□□ -1.86
CIITAP33076 MAPK10-362ENST00000641864 4484 ntBASIC3.42□□□□□ -1.86
CIITAP33076 RNU6-694P-201ENST00000364071 147 ntBASIC3.42□□□□□ -1.86
CIITAP33076 MIR128-1-201ENST00000384921 82 ntBASIC3.42□□□□□ -1.86
CIITAP33076 RNU6-550P-201ENST00000391057 101 ntBASIC3.42□□□□□ -1.86
CIITAP33076 RNU6-1197P-201ENST00000391183 107 ntBASIC3.42□□□□□ -1.86
CIITAP33076 AC092809.3-201ENST00000415453 231 ntBASIC3.42□□□□□ -1.86
CIITAP33076 AL645937.1-202ENST00000421799 937 ntBASIC3.42□□□□□ -1.86
CIITAP33076 NDUFB4P7-201ENST00000423198 363 ntBASIC3.42□□□□□ -1.86
CIITAP33076 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC3.42□□□□□ -1.86
CIITAP33076 MTND3P23-201ENST00000431980 347 ntBASIC3.42□□□□□ -1.86
CIITAP33076 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC3.42□□□□□ -1.86
CIITAP33076 HIGD1AP11-201ENST00000438361 280 ntBASIC3.42□□□□□ -1.86
CIITAP33076 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.42□□□□□ -1.86
CIITAP33076 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC3.42□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms