Protein–RNA interactions for Protein: P31270

HOXA11, Homeobox protein Hox-A11, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA11P31270 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
HOXA11P31270 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC3.34□□□□□ -1.87
HOXA11P31270 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.87
HOXA11P31270 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.87
HOXA11P31270 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
HOXA11P31270 NACAP2-201ENST00000318548 624 ntBASIC3.34□□□□□ -1.87
HOXA11P31270 RNU6-552P-201ENST00000362869 119 ntBASIC3.34□□□□□ -1.87
HOXA11P31270 Y_RNA.111-201ENST00000363248 100 ntBASIC3.34□□□□□ -1.87
HOXA11P31270 RNU6-1027P-201ENST00000383998 107 ntBASIC3.34□□□□□ -1.87
HOXA11P31270 Y_RNA.474-201ENST00000384341 102 ntBASIC3.34□□□□□ -1.87
HOXA11P31270 RPS12P18-201ENST00000442381 270 ntBASIC3.34□□□□□ -1.87
HOXA11P31270 MRPL50P4-201ENST00000446432 475 ntBASIC3.34□□□□□ -1.87
HOXA11P31270 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC3.34□□□□□ -1.87
HOXA11P31270 SNORD97-201ENST00000459187 142 ntBASIC3.34□□□□□ -1.87
HOXA11P31270 RNU7-180P-201ENST00000459240 63 ntBASIC3.34□□□□□ -1.87
HOXA11P31270 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC3.34□□□□□ -1.87
HOXA11P31270 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC3.34□□□□□ -1.87
HOXA11P31270 AC092436.1-201ENST00000506450 503 ntBASIC3.34□□□□□ -1.87
HOXA11P31270 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
HOXA11P31270 RNU1-103P-201ENST00000516502 125 ntBASIC3.34□□□□□ -1.87
HOXA11P31270 RNU7-30P-201ENST00000516835 62 ntBASIC3.34□□□□□ -1.87
HOXA11P31270 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC3.34□□□□□ -1.87
HOXA11P31270 AC104027.1-201ENST00000521887 300 ntBASIC3.34□□□□□ -1.87
HOXA11P31270 AC107953.1-201ENST00000522216 297 ntBASIC3.34□□□□□ -1.87
HOXA11P31270 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC3.34□□□□□ -1.87
HOXA11P31270 DEFB108D-201ENST00000527787 222 ntBASIC3.34□□□□□ -1.87
HOXA11P31270 AL133271.1-201ENST00000538229 291 ntBASIC3.34□□□□□ -1.87
HOXA11P31270 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC3.34□□□□□ -1.87
HOXA11P31270 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC3.34□□□□□ -1.87
HOXA11P31270 DNAJC8P1-201ENST00000554535 372 ntBASIC3.34□□□□□ -1.87
HOXA11P31270 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC3.34□□□□□ -1.87
HOXA11P31270 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC3.34□□□□□ -1.87
HOXA11P31270 MIR4703-201ENST00000577728 79 ntBASIC3.34□□□□□ -1.87
HOXA11P31270 LARP7P3-201ENST00000579888 337 ntBASIC3.34□□□□□ -1.87
HOXA11P31270 AC005498.1-201ENST00000592125 465 ntBASIC3.34□□□□□ -1.87
HOXA11P31270 TPTEP1-208ENST00000636884 213 ntBASIC3.34□□□□□ -1.87
HOXA11P31270 AC100810.6-201ENST00000638068 285 ntBASIC3.34□□□□□ -1.87
HOXA11P31270 AC233263.6-201ENST00000631132 1963 ntBASIC3.34□□□□□ -1.88
HOXA11P31270 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC3.34□□□□□ -1.88
HOXA11P31270 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
HOXA11P31270 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
HOXA11P31270 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
HOXA11P31270 PWAR6-201ENST00000552334 4618 ntBASIC3.33□□□□□ -1.88
HOXA11P31270 AC073325.2-201ENST00000339545 159 ntBASIC3.33□□□□□ -1.88
HOXA11P31270 RNU6-1227P-201ENST00000383981 107 ntBASIC3.33□□□□□ -1.88
HOXA11P31270 RNU6-637P-201ENST00000384050 107 ntBASIC3.33□□□□□ -1.88
HOXA11P31270 MIR634-201ENST00000385208 97 ntBASIC3.33□□□□□ -1.88
HOXA11P31270 AL356057.2-201ENST00000403318 432 ntBASIC3.33□□□□□ -1.88
HOXA11P31270 RNU2-47P-201ENST00000410649 186 ntBASIC3.33□□□□□ -1.88
HOXA11P31270 RN7SKP140-201ENST00000411196 284 ntBASIC3.33□□□□□ -1.88
HOXA11P31270 RNU6-516P-201ENST00000411381 104 ntBASIC3.33□□□□□ -1.88
HOXA11P31270 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.33□□□□□ -1.88
HOXA11P31270 BEND7P1-201ENST00000422058 457 ntBASIC3.33□□□□□ -1.88
HOXA11P31270 RPL7P46-201ENST00000425129 740 ntBASIC3.33□□□□□ -1.88
HOXA11P31270 MTCYBP6-201ENST00000441810 138 ntBASIC3.33□□□□□ -1.88
HOXA11P31270 AC007677.1-201ENST00000445757 515 ntBASIC3.33□□□□□ -1.88
HOXA11P31270 MTND1P18-201ENST00000448191 573 ntBASIC3.33□□□□□ -1.88
HOXA11P31270 RPL7P5-201ENST00000471472 736 ntBASIC3.33□□□□□ -1.88
HOXA11P31270 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC3.33□□□□□ -1.88
HOXA11P31270 AC098591.2-201ENST00000510152 315 ntBASIC3.33□□□□□ -1.88
HOXA11P31270 FAM206BP-201ENST00000510179 541 ntBASIC3.33□□□□□ -1.88
HOXA11P31270 Y_RNA.665-201ENST00000516177 98 ntBASIC3.33□□□□□ -1.88
HOXA11P31270 Y_RNA.675-201ENST00000516389 149 ntBASIC3.33□□□□□ -1.88
HOXA11P31270 RNU6-798P-201ENST00000516912 103 ntBASIC3.33□□□□□ -1.88
HOXA11P31270 HMGB1P41-201ENST00000520234 440 ntBASIC3.33□□□□□ -1.88
HOXA11P31270 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC3.33□□□□□ -1.88
HOXA11P31270 AC093027.1-201ENST00000546698 429 ntBASIC3.33□□□□□ -1.88
HOXA11P31270 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC3.33□□□□□ -1.88
HOXA11P31270 H3F3AP1-201ENST00000559984 334 ntBASIC3.33□□□□□ -1.88
HOXA11P31270 MIR4742-201ENST00000581069 85 ntBASIC3.33□□□□□ -1.88
HOXA11P31270 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC3.33□□□□□ -1.88
HOXA11P31270 AC113139.1-201ENST00000605049 239 ntBASIC3.33□□□□□ -1.88
HOXA11P31270 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC3.33□□□□□ -1.88
HOXA11P31270 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC3.33□□□□□ -1.88
HOXA11P31270 AL160413.1-201ENST00000622780 310 ntBASIC3.33□□□□□ -1.88
HOXA11P31270 AC090574.1-201ENST00000623186 233 ntBASIC3.33□□□□□ -1.88
HOXA11P31270 AC006386.2-201ENST00000624491 75 ntBASIC3.33□□□□□ -1.88
HOXA11P31270 AC012005.1-201ENST00000624575 75 ntBASIC3.33□□□□□ -1.88
HOXA11P31270 ATP8A2P2-201ENST00000437678 1568 ntBASIC3.33□□□□□ -1.88
HOXA11P31270 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
HOXA11P31270 AL355596.1-201ENST00000565399 3996 ntBASIC3.32□□□□□ -1.88
HOXA11P31270 AC121333.1-201ENST00000567488 2709 ntBASIC3.32□□□□□ -1.88
HOXA11P31270 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
HOXA11P31270 RNU1-75P-201ENST00000347264 129 ntBASIC3.32□□□□□ -1.88
HOXA11P31270 Y_RNA.167-201ENST00000363735 109 ntBASIC3.32□□□□□ -1.88
HOXA11P31270 CD24P4-201ENST00000382840 243 ntBASIC3.32□□□□□ -1.88
HOXA11P31270 MIR1290-201ENST00000408735 78 ntBASIC3.32□□□□□ -1.88
HOXA11P31270 RNU2-36P-201ENST00000410361 191 ntBASIC3.32□□□□□ -1.88
HOXA11P31270 RNA5SP107-201ENST00000411358 122 ntBASIC3.32□□□□□ -1.88
HOXA11P31270 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.32□□□□□ -1.88
HOXA11P31270 ARL5AP1-201ENST00000418991 388 ntBASIC3.32□□□□□ -1.88
HOXA11P31270 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC3.32□□□□□ -1.88
HOXA11P31270 AC107083.1-201ENST00000439643 279 ntBASIC3.32□□□□□ -1.88
HOXA11P31270 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.32□□□□□ -1.88
HOXA11P31270 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.32□□□□□ -1.88
HOXA11P31270 AL118520.1-201ENST00000450770 291 ntBASIC3.32□□□□□ -1.88
HOXA11P31270 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC3.32□□□□□ -1.88
HOXA11P31270 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.32□□□□□ -1.88
HOXA11P31270 AC006512.1-201ENST00000468816 291 ntBASIC3.32□□□□□ -1.88
HOXA11P31270 AC117440.1-201ENST00000474107 571 ntBASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms