Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 RNU5A-6P-201ENST00000384136 116 ntBASIC3.15□□□□□ -1.91
TM4SF1P30408 RNU6-348P-201ENST00000384386 107 ntBASIC3.15□□□□□ -1.91
TM4SF1P30408 RNU6-456P-201ENST00000384493 107 ntBASIC3.15□□□□□ -1.91
TM4SF1P30408 AL139397.2-201ENST00000404529 772 ntBASIC3.15□□□□□ -1.91
TM4SF1P30408 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC3.15□□□□□ -1.91
TM4SF1P30408 ATG3P1-201ENST00000419507 911 ntBASIC3.15□□□□□ -1.91
TM4SF1P30408 CALM2P2-201ENST00000428512 440 ntBASIC3.15□□□□□ -1.91
TM4SF1P30408 DPPA3P1-201ENST00000448050 469 ntBASIC3.15□□□□□ -1.91
TM4SF1P30408 MTND1P29-201ENST00000448112 647 ntBASIC3.15□□□□□ -1.91
TM4SF1P30408 AL353705.4-201ENST00000449661 238 ntBASIC3.15□□□□□ -1.91
TM4SF1P30408 MRPS17P3-201ENST00000465453 385 ntBASIC3.15□□□□□ -1.91
TM4SF1P30408 AC023194.1-201ENST00000493084 308 ntBASIC3.15□□□□□ -1.91
TM4SF1P30408 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC3.15□□□□□ -1.91
TM4SF1P30408 AC022447.1-201ENST00000515358 464 ntBASIC3.15□□□□□ -1.91
TM4SF1P30408 RNU6-914P-201ENST00000516749 109 ntBASIC3.15□□□□□ -1.91
TM4SF1P30408 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC3.15□□□□□ -1.91
TM4SF1P30408 RANP3-201ENST00000530970 276 ntBASIC3.15□□□□□ -1.91
TM4SF1P30408 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC3.15□□□□□ -1.91
TM4SF1P30408 AL359212.1-201ENST00000556608 614 ntBASIC3.15□□□□□ -1.91
TM4SF1P30408 DEFB122-202ENST00000569013 197 ntBASIC3.15□□□□□ -1.91
TM4SF1P30408 HMGN2P15-201ENST00000585707 270 ntBASIC3.15□□□□□ -1.91
TM4SF1P30408 MTND4LP5-201ENST00000605152 292 ntBASIC3.15□□□□□ -1.91
TM4SF1P30408 AC080013.6-201ENST00000606185 215 ntBASIC3.15□□□□□ -1.91
TM4SF1P30408 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.15□□□□□ -1.91
TM4SF1P30408 AL589743.7-201ENST00000612637 233 ntBASIC3.15□□□□□ -1.91
TM4SF1P30408 AC012409.4-201ENST00000612923 249 ntBASIC3.15□□□□□ -1.91
TM4SF1P30408 AC091834.1-201ENST00000614543 472 ntBASIC3.15□□□□□ -1.91
TM4SF1P30408 AC092656.1-203ENST00000624134 423 ntBASIC3.15□□□□□ -1.91
TM4SF1P30408 AC110079.1-202ENST00000635213 138 ntBASIC3.15□□□□□ -1.91
TM4SF1P30408 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.91
TM4SF1P30408 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
TM4SF1P30408 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
TM4SF1P30408 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.14□□□□□ -1.91
TM4SF1P30408 AL663109.1-201ENST00000411498 844 ntBASIC3.14□□□□□ -1.91
TM4SF1P30408 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC3.14□□□□□ -1.91
TM4SF1P30408 AL591704.1-201ENST00000432574 275 ntBASIC3.14□□□□□ -1.91
TM4SF1P30408 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.14□□□□□ -1.91
TM4SF1P30408 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC3.14□□□□□ -1.91
TM4SF1P30408 AC103975.1-201ENST00000482506 483 ntBASIC3.14□□□□□ -1.91
TM4SF1P30408 AC079140.3-201ENST00000511111 550 ntBASIC3.14□□□□□ -1.91
TM4SF1P30408 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.14□□□□□ -1.91
TM4SF1P30408 RAC1P5-201ENST00000512182 576 ntBASIC3.14□□□□□ -1.91
TM4SF1P30408 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.14□□□□□ -1.91
TM4SF1P30408 RNU6-1315P-201ENST00000517187 99 ntBASIC3.14□□□□□ -1.91
TM4SF1P30408 AC090572.1-201ENST00000519251 160 ntBASIC3.14□□□□□ -1.91
TM4SF1P30408 OR4R1P-201ENST00000529879 463 ntBASIC3.14□□□□□ -1.91
TM4SF1P30408 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC3.14□□□□□ -1.91
TM4SF1P30408 AC025281.1-201ENST00000567026 265 ntBASIC3.14□□□□□ -1.91
TM4SF1P30408 MIR1273D-201ENST00000577266 86 ntBASIC3.14□□□□□ -1.91
TM4SF1P30408 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.14□□□□□ -1.91
TM4SF1P30408 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.14□□□□□ -1.91
TM4SF1P30408 LRRC77P-213ENST00000637727 880 ntBASIC3.14□□□□□ -1.91
TM4SF1P30408 MIR7153-201ENST00000637758 57 ntBASIC3.14□□□□□ -1.91
TM4SF1P30408 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.14□□□□□ -1.91
TM4SF1P30408 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
TM4SF1P30408 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
TM4SF1P30408 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
TM4SF1P30408 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
TM4SF1P30408 MTND5P17-201ENST00000418405 1603 ntBASIC3.13□□□□□ -1.91
TM4SF1P30408 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.13□□□□□ -1.91
TM4SF1P30408 RNU6-658P-201ENST00000384606 106 ntBASIC3.13□□□□□ -1.91
TM4SF1P30408 MIR181B1-201ENST00000385240 110 ntBASIC3.13□□□□□ -1.91
TM4SF1P30408 RNU6-193P-201ENST00000410977 107 ntBASIC3.13□□□□□ -1.91
TM4SF1P30408 BTF3L4P1-201ENST00000413813 468 ntBASIC3.13□□□□□ -1.91
TM4SF1P30408 AL353729.1-201ENST00000425044 720 ntBASIC3.13□□□□□ -1.91
TM4SF1P30408 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC3.13□□□□□ -1.91
TM4SF1P30408 DPPA2P1-201ENST00000428060 556 ntBASIC3.13□□□□□ -1.91
TM4SF1P30408 HMGN2P3-201ENST00000433603 273 ntBASIC3.13□□□□□ -1.91
TM4SF1P30408 RPS15AP5-201ENST00000436276 388 ntBASIC3.13□□□□□ -1.91
TM4SF1P30408 HMGN2P5-201ENST00000436882 273 ntBASIC3.13□□□□□ -1.91
TM4SF1P30408 AC093392.2-201ENST00000450682 337 ntBASIC3.13□□□□□ -1.91
TM4SF1P30408 AC003071.1-201ENST00000451219 789 ntBASIC3.13□□□□□ -1.91
TM4SF1P30408 RGS5-217ENST00000451759 835 ntTSL 3 BASIC3.13□□□□□ -1.91
TM4SF1P30408 MTATP6P7-201ENST00000453315 681 ntBASIC3.13□□□□□ -1.91
TM4SF1P30408 C1DP4-201ENST00000455429 424 ntBASIC3.13□□□□□ -1.91
TM4SF1P30408 AL122001.1-201ENST00000457027 370 ntBASIC3.13□□□□□ -1.91
TM4SF1P30408 MTCO2P18-201ENST00000457151 658 ntBASIC3.13□□□□□ -1.91
TM4SF1P30408 RPS3AP17-201ENST00000472594 777 ntBASIC3.13□□□□□ -1.91
TM4SF1P30408 TRBV1-201ENST00000476502 284 ntBASIC3.13□□□□□ -1.91
TM4SF1P30408 AC126182.1-201ENST00000478134 357 ntBASIC3.13□□□□□ -1.91
TM4SF1P30408 AC079382.1-201ENST00000493346 557 ntBASIC3.13□□□□□ -1.91
TM4SF1P30408 AC105252.1-201ENST00000503089 286 ntBASIC3.13□□□□□ -1.91
TM4SF1P30408 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC3.13□□□□□ -1.91
TM4SF1P30408 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC3.13□□□□□ -1.91
TM4SF1P30408 RNU6-1220P-201ENST00000517126 108 ntBASIC3.13□□□□□ -1.91
TM4SF1P30408 AP002963.1-201ENST00000530590 184 ntBASIC3.13□□□□□ -1.91
TM4SF1P30408 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC3.13□□□□□ -1.91
TM4SF1P30408 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC3.13□□□□□ -1.91
TM4SF1P30408 AC004223.2-201ENST00000590309 544 ntBASIC3.13□□□□□ -1.91
TM4SF1P30408 AC025754.2-201ENST00000606491 432 ntBASIC3.13□□□□□ -1.91
TM4SF1P30408 U6.99-201ENST00000637524 83 ntBASIC3.13□□□□□ -1.91
TM4SF1P30408 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
TM4SF1P30408 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
TM4SF1P30408 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
TM4SF1P30408 AC110491.1-201ENST00000562191 2010 ntBASIC3.13□□□□□ -1.91
TM4SF1P30408 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
TM4SF1P30408 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
TM4SF1P30408 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC3.12□□□□□ -1.91
TM4SF1P30408 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.12□□□□□ -1.91
TM4SF1P30408 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms