Protein–RNA interactions for Protein: P25940

COL5A3, Collagen alpha-3(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,745 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3P25940 AC008127.2-201ENST00000549925 1075 ntBASIC1.56□□□□□ -2.16
COL5A3P25940 AC009712.1-201ENST00000564938 316 ntBASIC1.56□□□□□ -2.16
COL5A3P25940 FAM60BP-201ENST00000578364 658 ntBASIC1.56□□□□□ -2.16
COL5A3P25940 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC1.56□□□□□ -2.16
COL5A3P25940 AC234772.3-201ENST00000602277 528 ntBASIC1.56□□□□□ -2.16
COL5A3P25940 AC080013.3-201ENST00000606839 578 ntBASIC1.56□□□□□ -2.16
COL5A3P25940 AC007349.4-201ENST00000608114 532 ntBASIC1.56□□□□□ -2.16
COL5A3P25940 AC063944.3-201ENST00000609969 533 ntBASIC1.56□□□□□ -2.16
COL5A3P25940 AL355816.2-201ENST00000610049 647 ntBASIC1.56□□□□□ -2.16
COL5A3P25940 AC092106.3-201ENST00000611308 722 ntBASIC1.56□□□□□ -2.16
COL5A3P25940 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
COL5A3P25940 AL161629.2-201ENST00000615347 275 ntBASIC1.56□□□□□ -2.16
COL5A3P25940 AL356596.1-201ENST00000624230 379 ntBASIC1.56□□□□□ -2.16
COL5A3P25940 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC1.56□□□□□ -2.16
COL5A3P25940 AP000776.1-201ENST00000530032 1663 ntBASIC1.55□□□□□ -2.16
COL5A3P25940 RNU6-1214P-201ENST00000363650 109 ntBASIC1.55□□□□□ -2.16
COL5A3P25940 SNORD114-27-201ENST00000363766 70 ntBASIC1.55□□□□□ -2.16
COL5A3P25940 RNU6-1200P-201ENST00000384162 107 ntBASIC1.55□□□□□ -2.16
COL5A3P25940 SNORD51-201ENST00000384320 80 ntBASIC1.55□□□□□ -2.16
COL5A3P25940 U3.29-201ENST00000391296 212 ntBASIC1.55□□□□□ -2.16
COL5A3P25940 AC016769.3-201ENST00000396562 315 ntBASIC1.55□□□□□ -2.16
COL5A3P25940 USP9YP33-201ENST00000412220 421 ntBASIC1.55□□□□□ -2.16
COL5A3P25940 TPMTP2-201ENST00000414372 726 ntBASIC1.55□□□□□ -2.16
COL5A3P25940 AC092634.6-201ENST00000418558 192 ntBASIC1.55□□□□□ -2.16
COL5A3P25940 HMGB1P49-201ENST00000418882 569 ntBASIC1.55□□□□□ -2.16
COL5A3P25940 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC1.55□□□□□ -2.16
COL5A3P25940 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC1.55□□□□□ -2.16
COL5A3P25940 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.55□□□□□ -2.16
COL5A3P25940 USP9YP35-201ENST00000435696 412 ntBASIC1.55□□□□□ -2.16
COL5A3P25940 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC1.55□□□□□ -2.16
COL5A3P25940 MTCYBP11-201ENST00000447254 1109 ntBASIC1.55□□□□□ -2.16
COL5A3P25940 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC1.55□□□□□ -2.16
COL5A3P25940 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC1.55□□□□□ -2.16
COL5A3P25940 AC097493.1-201ENST00000463958 372 ntBASIC1.55□□□□□ -2.16
COL5A3P25940 RPL7P18-201ENST00000478965 734 ntBASIC1.55□□□□□ -2.16
COL5A3P25940 AC098862.1-201ENST00000504991 413 ntBASIC1.55□□□□□ -2.16
COL5A3P25940 AC006499.2-201ENST00000513470 337 ntBASIC1.55□□□□□ -2.16
COL5A3P25940 RNU6-583P-201ENST00000516012 92 ntBASIC1.55□□□□□ -2.16
COL5A3P25940 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC1.55□□□□□ -2.16
COL5A3P25940 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC1.55□□□□□ -2.16
COL5A3P25940 MTND1P24-201ENST00000552175 861 ntBASIC1.55□□□□□ -2.16
COL5A3P25940 AGGF1P5-201ENST00000567900 919 ntBASIC1.55□□□□□ -2.16
COL5A3P25940 MIR4637-201ENST00000582405 84 ntBASIC1.55□□□□□ -2.16
COL5A3P25940 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC1.55□□□□□ -2.16
COL5A3P25940 AL031176.1-201ENST00000604554 466 ntBASIC1.55□□□□□ -2.16
COL5A3P25940 AC131235.4-201ENST00000609288 620 ntBASIC1.55□□□□□ -2.16
COL5A3P25940 AC091925.2-201ENST00000625059 256 ntBASIC1.55□□□□□ -2.16
COL5A3P25940 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC1.55□□□□□ -2.16
COL5A3P25940 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC1.55□□□□□ -2.16
COL5A3P25940 AL079343.1-201ENST00000572358 1771 ntBASIC1.54□□□□□ -2.16
COL5A3P25940 MTCO1P23-201ENST00000415223 1526 ntBASIC1.54□□□□□ -2.16
COL5A3P25940 Y_RNA.251-201ENST00000364551 99 ntBASIC1.54□□□□□ -2.16
COL5A3P25940 RNU6-952P-201ENST00000391164 108 ntBASIC1.54□□□□□ -2.16
COL5A3P25940 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.54□□□□□ -2.16
COL5A3P25940 ELOCP9-201ENST00000418624 239 ntBASIC1.54□□□□□ -2.16
COL5A3P25940 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.54□□□□□ -2.16
COL5A3P25940 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC1.54□□□□□ -2.16
COL5A3P25940 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC1.54□□□□□ -2.16
COL5A3P25940 EEF1E1P1-201ENST00000446998 430 ntBASIC1.54□□□□□ -2.16
COL5A3P25940 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC1.54□□□□□ -2.16
COL5A3P25940 ZNF736P8Y-201ENST00000451913 669 ntBASIC1.54□□□□□ -2.16
COL5A3P25940 SUMO2P2-201ENST00000456482 255 ntBASIC1.54□□□□□ -2.16
COL5A3P25940 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
COL5A3P25940 AL359273.1-201ENST00000510918 627 ntBASIC1.54□□□□□ -2.16
COL5A3P25940 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC1.54□□□□□ -2.16
COL5A3P25940 SNORA70.16-201ENST00000516390 95 ntBASIC1.54□□□□□ -2.16
COL5A3P25940 MRPS36P3-201ENST00000519284 130 ntBASIC1.54□□□□□ -2.16
COL5A3P25940 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
COL5A3P25940 ELOCP32-201ENST00000548625 324 ntBASIC1.54□□□□□ -2.16
COL5A3P25940 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC1.54□□□□□ -2.16
COL5A3P25940 MIR4999-201ENST00000585029 91 ntBASIC1.54□□□□□ -2.16
COL5A3P25940 AC022022.2-201ENST00000602989 360 ntBASIC1.54□□□□□ -2.16
COL5A3P25940 AC012669.1-201ENST00000603209 283 ntBASIC1.54□□□□□ -2.16
COL5A3P25940 AC106791.2-201ENST00000604680 391 ntBASIC1.54□□□□□ -2.16
COL5A3P25940 AC018638.7-201ENST00000605836 1114 ntBASIC1.54□□□□□ -2.16
COL5A3P25940 AC006270.3-201ENST00000605967 1036 ntBASIC1.54□□□□□ -2.16
COL5A3P25940 RNU6-88P-201ENST00000606801 100 ntBASIC1.54□□□□□ -2.16
COL5A3P25940 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC1.54□□□□□ -2.16
COL5A3P25940 AC080013.4-201ENST00000607624 649 ntBASIC1.54□□□□□ -2.16
COL5A3P25940 AC025588.4-201ENST00000615802 908 ntBASIC1.54□□□□□ -2.16
COL5A3P25940 AC091895.1-201ENST00000624494 256 ntBASIC1.54□□□□□ -2.16
COL5A3P25940 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC1.54□□□□□ -2.16
COL5A3P25940 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
COL5A3P25940 AL359851.1-201ENST00000569460 4997 ntBASIC1.54□□□□□ -2.16
COL5A3P25940 DEFB108F-201ENST00000344638 222 ntBASIC1.54□□□□□ -2.16
COL5A3P25940 Y_RNA.458-201ENST00000384240 102 ntBASIC1.54□□□□□ -2.16
COL5A3P25940 RNU6-636P-201ENST00000384598 107 ntBASIC1.54□□□□□ -2.16
COL5A3P25940 MIR17-201ENST00000385012 84 ntBASIC1.54□□□□□ -2.16
COL5A3P25940 RPL22P18-201ENST00000417197 377 ntBASIC1.54□□□□□ -2.16
COL5A3P25940 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC1.54□□□□□ -2.16
COL5A3P25940 MTND3P1-201ENST00000441336 220 ntBASIC1.54□□□□□ -2.16
COL5A3P25940 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC1.54□□□□□ -2.16
COL5A3P25940 RNA5SP310-201ENST00000459084 116 ntBASIC1.54□□□□□ -2.16
COL5A3P25940 SETP11-201ENST00000473027 690 ntBASIC1.54□□□□□ -2.16
COL5A3P25940 RPL30P14-201ENST00000482744 348 ntBASIC1.54□□□□□ -2.16
COL5A3P25940 NAA50-206ENST00000493454 964 ntTSL 2 BASIC1.54□□□□□ -2.16
COL5A3P25940 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC1.54□□□□□ -2.16
COL5A3P25940 MTCYBP35-201ENST00000503630 1137 ntBASIC1.54□□□□□ -2.16
COL5A3P25940 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC1.54□□□□□ -2.16
COL5A3P25940 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.54□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 114.3 ms