Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1.52□□□□□ -2.17
COL11A1P12107 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC1.52□□□□□ -2.17
COL11A1P12107 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC1.52□□□□□ -2.17
COL11A1P12107 DUXAP1-201ENST00000556632 463 ntBASIC1.52□□□□□ -2.17
COL11A1P12107 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC1.52□□□□□ -2.17
COL11A1P12107 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC1.52□□□□□ -2.17
COL11A1P12107 BBIP1P1-201ENST00000602999 279 ntBASIC1.52□□□□□ -2.17
COL11A1P12107 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC1.52□□□□□ -2.17
COL11A1P12107 AC022709.1-201ENST00000615967 87 ntBASIC1.52□□□□□ -2.17
COL11A1P12107 AC073968.1-201ENST00000618594 637 ntBASIC1.52□□□□□ -2.17
COL11A1P12107 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC1.52□□□□□ -2.17
COL11A1P12107 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC1.52□□□□□ -2.17
COL11A1P12107 MTCO1P23-201ENST00000415223 1526 ntBASIC1.52□□□□□ -2.17
COL11A1P12107 Y_RNA.36-201ENST00000362602 112 ntBASIC1.52□□□□□ -2.17
COL11A1P12107 RNU1-52P-201ENST00000384190 164 ntBASIC1.52□□□□□ -2.17
COL11A1P12107 MIR17-201ENST00000385012 84 ntBASIC1.52□□□□□ -2.17
COL11A1P12107 AL355497.1-201ENST00000406262 551 ntBASIC1.52□□□□□ -2.17
COL11A1P12107 MTCYBP38-201ENST00000417160 1123 ntBASIC1.52□□□□□ -2.17
COL11A1P12107 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC1.52□□□□□ -2.17
COL11A1P12107 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC1.52□□□□□ -2.17
COL11A1P12107 EEF1E1P1-201ENST00000446998 430 ntBASIC1.52□□□□□ -2.17
COL11A1P12107 MTND1P31-201ENST00000449206 961 ntBASIC1.52□□□□□ -2.17
COL11A1P12107 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC1.52□□□□□ -2.17
COL11A1P12107 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC1.52□□□□□ -2.17
COL11A1P12107 Z82190.1-201ENST00000454534 490 ntBASIC1.52□□□□□ -2.17
COL11A1P12107 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC1.52□□□□□ -2.17
COL11A1P12107 AC092757.1-201ENST00000467293 467 ntBASIC1.52□□□□□ -2.17
COL11A1P12107 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC1.52□□□□□ -2.17
COL11A1P12107 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC1.52□□□□□ -2.17
COL11A1P12107 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC1.52□□□□□ -2.17
COL11A1P12107 AC087465.1-201ENST00000560574 245 ntBASIC1.52□□□□□ -2.17
COL11A1P12107 AL158211.1-201ENST00000566763 763 ntBASIC1.52□□□□□ -2.17
COL11A1P12107 AGGF1P5-201ENST00000567900 919 ntBASIC1.52□□□□□ -2.17
COL11A1P12107 MIR3117-201ENST00000584034 78 ntBASIC1.52□□□□□ -2.17
COL11A1P12107 AC015688.2-201ENST00000584523 262 ntBASIC1.52□□□□□ -2.17
COL11A1P12107 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC1.52□□□□□ -2.17
COL11A1P12107 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.52□□□□□ -2.17
COL11A1P12107 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
COL11A1P12107 SDAD1P2-201ENST00000441308 2028 ntBASIC1.51□□□□□ -2.17
COL11A1P12107 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
COL11A1P12107 AL356473.1-201ENST00000406203 1408 ntBASIC1.51□□□□□ -2.17
COL11A1P12107 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC1.51□□□□□ -2.17
COL11A1P12107 GDI2P1-201ENST00000429312 1336 ntBASIC1.51□□□□□ -2.17
COL11A1P12107 ZNF736P9Y-201ENST00000439586 1345 ntBASIC1.51□□□□□ -2.17
COL11A1P12107 MTND4P27-201ENST00000450813 1354 ntBASIC1.51□□□□□ -2.17
COL11A1P12107 DDX43P2-201ENST00000604753 1354 ntBASIC1.51□□□□□ -2.17
COL11A1P12107 RNU6-461P-201ENST00000364195 107 ntBASIC1.51□□□□□ -2.17
COL11A1P12107 RNU4-68P-201ENST00000364314 141 ntBASIC1.51□□□□□ -2.17
COL11A1P12107 RNU1-93P-201ENST00000364704 169 ntBASIC1.51□□□□□ -2.17
COL11A1P12107 ERHP2-201ENST00000402323 299 ntBASIC1.51□□□□□ -2.17
COL11A1P12107 RNU2-15P-201ENST00000410692 191 ntBASIC1.51□□□□□ -2.17
COL11A1P12107 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC1.51□□□□□ -2.17
COL11A1P12107 VPS26BP1-201ENST00000417155 755 ntBASIC1.51□□□□□ -2.17
COL11A1P12107 AC092634.6-201ENST00000418558 192 ntBASIC1.51□□□□□ -2.17
COL11A1P12107 AC092447.3-201ENST00000426027 686 ntBASIC1.51□□□□□ -2.17
COL11A1P12107 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC1.51□□□□□ -2.17
COL11A1P12107 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC1.51□□□□□ -2.17
COL11A1P12107 MTND1P32-201ENST00000433043 938 ntBASIC1.51□□□□□ -2.17
COL11A1P12107 AL354941.1-201ENST00000438600 464 ntBASIC1.51□□□□□ -2.17
COL11A1P12107 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.51□□□□□ -2.17
COL11A1P12107 OSTCP8-201ENST00000445117 448 ntBASIC1.51□□□□□ -2.17
COL11A1P12107 AL606662.1-201ENST00000445763 553 ntBASIC1.51□□□□□ -2.17
COL11A1P12107 AC007395.1-201ENST00000451333 677 ntBASIC1.51□□□□□ -2.17
COL11A1P12107 AC234775.1-201ENST00000454247 670 ntBASIC1.51□□□□□ -2.17
COL11A1P12107 RNU7-26P-201ENST00000458980 63 ntBASIC1.51□□□□□ -2.17
COL11A1P12107 AC026410.2-201ENST00000460281 156 ntBASIC1.51□□□□□ -2.17
COL11A1P12107 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
COL11A1P12107 COX7A2P2-201ENST00000505291 250 ntBASIC1.51□□□□□ -2.17
COL11A1P12107 RNY4P37-201ENST00000516225 96 ntBASIC1.51□□□□□ -2.17
COL11A1P12107 RNU6-798P-201ENST00000516912 103 ntBASIC1.51□□□□□ -2.17
COL11A1P12107 SCARNA3-201ENST00000517097 143 ntBASIC1.51□□□□□ -2.17
COL11A1P12107 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC1.51□□□□□ -2.17
COL11A1P12107 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC1.51□□□□□ -2.17
COL11A1P12107 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC1.51□□□□□ -2.17
COL11A1P12107 LSM6P2-201ENST00000552208 177 ntBASIC1.51□□□□□ -2.17
COL11A1P12107 AL139344.1-201ENST00000605228 195 ntBASIC1.51□□□□□ -2.17
COL11A1P12107 AC006270.3-201ENST00000605967 1036 ntBASIC1.51□□□□□ -2.17
COL11A1P12107 AC131235.4-201ENST00000609288 620 ntBASIC1.51□□□□□ -2.17
COL11A1P12107 MIR6078-201ENST00000611069 100 ntBASIC1.51□□□□□ -2.17
COL11A1P12107 AL031667.3-201ENST00000620124 655 ntBASIC1.51□□□□□ -2.17
COL11A1P12107 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC1.51□□□□□ -2.17
COL11A1P12107 AC008993.2-201ENST00000631744 806 ntBASIC1.51□□□□□ -2.17
COL11A1P12107 TPTE2P4-201ENST00000258589 1605 ntBASIC1.51□□□□□ -2.17
COL11A1P12107 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
COL11A1P12107 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
COL11A1P12107 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC1.51□□□□□ -2.17
COL11A1P12107 AC009812.4-201ENST00000569134 1805 ntBASIC1.5□□□□□ -2.17
COL11A1P12107 AL137003.2-201ENST00000606924 2538 ntBASIC1.5□□□□□ -2.17
COL11A1P12107 RNU6-234P-201ENST00000365229 104 ntBASIC1.5□□□□□ -2.17
COL11A1P12107 MIR320A-201ENST00000385302 82 ntBASIC1.5□□□□□ -2.17
COL11A1P12107 AL356421.1-201ENST00000403255 413 ntBASIC1.5□□□□□ -2.17
COL11A1P12107 RNU4ATAC16P-201ENST00000408512 126 ntBASIC1.5□□□□□ -2.17
COL11A1P12107 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC1.5□□□□□ -2.17
COL11A1P12107 PGBD4P3-201ENST00000440731 581 ntBASIC1.5□□□□□ -2.17
COL11A1P12107 MTND3P1-201ENST00000441336 220 ntBASIC1.5□□□□□ -2.17
COL11A1P12107 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC1.5□□□□□ -2.17
COL11A1P12107 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC1.5□□□□□ -2.17
COL11A1P12107 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC1.5□□□□□ -2.17
COL11A1P12107 MEMO1P3-201ENST00000459811 302 ntBASIC1.5□□□□□ -2.17
COL11A1P12107 HMGN1P7-201ENST00000491722 313 ntBASIC1.5□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms