Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
HOXC6P09630 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
HOXC6P09630 TAB3P1-202ENST00000452645 1634 ntBASIC3.31□□□□□ -1.88
HOXC6P09630 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.31□□□□□ -1.88
HOXC6P09630 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
HOXC6P09630 RNU4-76P-201ENST00000364509 141 ntBASIC3.31□□□□□ -1.88
HOXC6P09630 Y_RNA.373-201ENST00000365600 103 ntBASIC3.31□□□□□ -1.88
HOXC6P09630 AL109755.1-201ENST00000401791 649 ntBASIC3.31□□□□□ -1.88
HOXC6P09630 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC3.31□□□□□ -1.88
HOXC6P09630 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC3.31□□□□□ -1.88
HOXC6P09630 BEND7P1-201ENST00000422058 457 ntBASIC3.31□□□□□ -1.88
HOXC6P09630 RPL7L1P10-201ENST00000427790 463 ntBASIC3.31□□□□□ -1.88
HOXC6P09630 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC3.31□□□□□ -1.88
HOXC6P09630 IFNA20P-201ENST00000436840 528 ntBASIC3.31□□□□□ -1.88
HOXC6P09630 RPL35AP22-201ENST00000436855 335 ntBASIC3.31□□□□□ -1.88
HOXC6P09630 GAPDHP27-201ENST00000447427 1020 ntBASIC3.31□□□□□ -1.88
HOXC6P09630 RPL37P4-201ENST00000448908 268 ntBASIC3.31□□□□□ -1.88
HOXC6P09630 HMGN2P26-201ENST00000463169 339 ntBASIC3.31□□□□□ -1.88
HOXC6P09630 AC010631.1-201ENST00000474150 156 ntBASIC3.31□□□□□ -1.88
HOXC6P09630 RPL21P99-201ENST00000480369 423 ntBASIC3.31□□□□□ -1.88
HOXC6P09630 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC3.31□□□□□ -1.88
HOXC6P09630 AC005921.1-201ENST00000510589 286 ntBASIC3.31□□□□□ -1.88
HOXC6P09630 RNU4-29P-201ENST00000515943 174 ntBASIC3.31□□□□□ -1.88
HOXC6P09630 RNU4-49P-201ENST00000516080 140 ntBASIC3.31□□□□□ -1.88
HOXC6P09630 RNU4ATAC8P-201ENST00000516196 109 ntBASIC3.31□□□□□ -1.88
HOXC6P09630 RNU6-1314P-201ENST00000517139 104 ntBASIC3.31□□□□□ -1.88
HOXC6P09630 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC3.31□□□□□ -1.88
HOXC6P09630 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC3.31□□□□□ -1.88
HOXC6P09630 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC3.31□□□□□ -1.88
HOXC6P09630 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.31□□□□□ -1.88
HOXC6P09630 MIR3186-201ENST00000577404 85 ntBASIC3.31□□□□□ -1.88
HOXC6P09630 MIR5583-1-201ENST00000580941 59 ntBASIC3.31□□□□□ -1.88
HOXC6P09630 VN1R80P-201ENST00000597126 338 ntBASIC3.31□□□□□ -1.88
HOXC6P09630 AC243960.4-201ENST00000600532 288 ntBASIC3.31□□□□□ -1.88
HOXC6P09630 TUG1_2.1-201ENST00000614234 87 ntBASIC3.31□□□□□ -1.88
HOXC6P09630 AL450472.3-201ENST00000615578 367 ntBASIC3.31□□□□□ -1.88
HOXC6P09630 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC3.31□□□□□ -1.88
HOXC6P09630 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC3.31□□□□□ -1.88
HOXC6P09630 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
HOXC6P09630 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
HOXC6P09630 AC004972.1-201ENST00000623934 2209 ntBASIC3.31□□□□□ -1.88
HOXC6P09630 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
HOXC6P09630 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
HOXC6P09630 RNU4-79P-201ENST00000362764 141 ntBASIC3.3□□□□□ -1.88
HOXC6P09630 Y_RNA.231-201ENST00000364358 102 ntBASIC3.3□□□□□ -1.88
HOXC6P09630 RNU6-335P-201ENST00000364563 113 ntBASIC3.3□□□□□ -1.88
HOXC6P09630 HSPE1P26-201ENST00000405341 275 ntBASIC3.3□□□□□ -1.88
HOXC6P09630 AL583834.1-201ENST00000406943 343 ntBASIC3.3□□□□□ -1.88
HOXC6P09630 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.3□□□□□ -1.88
HOXC6P09630 AC099677.1-201ENST00000420575 175 ntBASIC3.3□□□□□ -1.88
HOXC6P09630 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC3.3□□□□□ -1.88
HOXC6P09630 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.3□□□□□ -1.88
HOXC6P09630 FGF7P4-201ENST00000509595 295 ntBASIC3.3□□□□□ -1.88
HOXC6P09630 RNU6-1095P-201ENST00000516148 108 ntBASIC3.3□□□□□ -1.88
HOXC6P09630 RNA5SP503-201ENST00000517047 117 ntBASIC3.3□□□□□ -1.88
HOXC6P09630 AC105029.1-201ENST00000520250 669 ntBASIC3.3□□□□□ -1.88
HOXC6P09630 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
HOXC6P09630 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
HOXC6P09630 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
HOXC6P09630 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.3□□□□□ -1.88
HOXC6P09630 AL118558.2-201ENST00000556294 238 ntBASIC3.3□□□□□ -1.88
HOXC6P09630 AC026464.5-201ENST00000562497 722 ntBASIC3.3□□□□□ -1.88
HOXC6P09630 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC3.3□□□□□ -1.88
HOXC6P09630 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC3.3□□□□□ -1.88
HOXC6P09630 MIR4703-201ENST00000577728 79 ntBASIC3.3□□□□□ -1.88
HOXC6P09630 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.3□□□□□ -1.88
HOXC6P09630 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.3□□□□□ -1.88
HOXC6P09630 XIAPP1-201ENST00000603162 600 ntBASIC3.3□□□□□ -1.88
HOXC6P09630 AC016727.1-205ENST00000605437 569 ntBASIC3.3□□□□□ -1.88
HOXC6P09630 AC012443.1-201ENST00000605605 231 ntBASIC3.3□□□□□ -1.88
HOXC6P09630 AC093913.1-201ENST00000614178 329 ntBASIC3.3□□□□□ -1.88
HOXC6P09630 RMST_7.1-201ENST00000621935 268 ntBASIC3.3□□□□□ -1.88
HOXC6P09630 AL133216.2-202ENST00000634512 349 ntBASIC3.3□□□□□ -1.88
HOXC6P09630 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC3.3□□□□□ -1.88
HOXC6P09630 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.3□□□□□ -1.88
HOXC6P09630 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
HOXC6P09630 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
HOXC6P09630 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC3.29□□□□□ -1.88
HOXC6P09630 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
HOXC6P09630 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
HOXC6P09630 AC073343.1-201ENST00000328239 651 ntBASIC3.29□□□□□ -1.88
HOXC6P09630 SNORA31-201ENST00000362607 130 ntBASIC3.29□□□□□ -1.88
HOXC6P09630 RNU6-179P-201ENST00000363350 107 ntBASIC3.29□□□□□ -1.88
HOXC6P09630 Y_RNA.184-201ENST00000363884 108 ntBASIC3.29□□□□□ -1.88
HOXC6P09630 SNORA7.2-201ENST00000364446 145 ntBASIC3.29□□□□□ -1.88
HOXC6P09630 RNA5SP189-201ENST00000364920 115 ntBASIC3.29□□□□□ -1.88
HOXC6P09630 SNORD115-7-201ENST00000365306 82 ntBASIC3.29□□□□□ -1.88
HOXC6P09630 RNU6-61P-201ENST00000365528 109 ntBASIC3.29□□□□□ -1.88
HOXC6P09630 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.29□□□□□ -1.88
HOXC6P09630 Y_RNA.419-201ENST00000384041 102 ntBASIC3.29□□□□□ -1.88
HOXC6P09630 Y_RNA.576-201ENST00000384781 102 ntBASIC3.29□□□□□ -1.88
HOXC6P09630 MIR514A2-201ENST00000385131 88 ntBASIC3.29□□□□□ -1.88
HOXC6P09630 MIR514A3-201ENST00000385132 88 ntBASIC3.29□□□□□ -1.88
HOXC6P09630 MIR9-1-201ENST00000385198 89 ntBASIC3.29□□□□□ -1.88
HOXC6P09630 RNU6-837P-201ENST00000391056 108 ntBASIC3.29□□□□□ -1.88
HOXC6P09630 AL606923.1-201ENST00000406616 190 ntBASIC3.29□□□□□ -1.88
HOXC6P09630 MTCO3P46-201ENST00000425787 232 ntBASIC3.29□□□□□ -1.88
HOXC6P09630 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC3.29□□□□□ -1.88
HOXC6P09630 ERLEC1P1-201ENST00000433806 578 ntBASIC3.29□□□□□ -1.88
HOXC6P09630 RPL23AP22-201ENST00000437556 453 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 128.2 ms