Protein–RNA interactions for Protein: P09017

HOXC4, Homeobox protein Hox-C4, humanhuman

Predicted RBP Predictions only

Length 264 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4P09017 SNORD114-30-201ENST00000364448 72 ntBASIC2.32□□□□□ -2.04
HOXC4P09017 SNORA70B-201ENST00000384210 135 ntBASIC2.32□□□□□ -2.04
HOXC4P09017 SNORD115.1-201ENST00000391109 76 ntBASIC2.32□□□□□ -2.04
HOXC4P09017 RNA5SP425-201ENST00000410336 112 ntBASIC2.32□□□□□ -2.04
HOXC4P09017 C1DP2-201ENST00000418167 426 ntBASIC2.32□□□□□ -2.04
HOXC4P09017 AC018630.2-202ENST00000422992 927 ntBASIC2.32□□□□□ -2.04
HOXC4P09017 PPP1R11P2-201ENST00000423543 382 ntBASIC2.32□□□□□ -2.04
HOXC4P09017 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.32□□□□□ -2.04
HOXC4P09017 ISCA1P6-201ENST00000427740 390 ntBASIC2.32□□□□□ -2.04
HOXC4P09017 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC2.32□□□□□ -2.04
HOXC4P09017 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.32□□□□□ -2.04
HOXC4P09017 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC2.32□□□□□ -2.04
HOXC4P09017 snoU13.8-201ENST00000458890 104 ntBASIC2.32□□□□□ -2.04
HOXC4P09017 RNU7-23P-201ENST00000459465 62 ntBASIC2.32□□□□□ -2.04
HOXC4P09017 AC087588.1-201ENST00000462203 316 ntBASIC2.32□□□□□ -2.04
HOXC4P09017 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.32□□□□□ -2.04
HOXC4P09017 AL049874.1-201ENST00000489560 388 ntBASIC2.32□□□□□ -2.04
HOXC4P09017 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.32□□□□□ -2.04
HOXC4P09017 RPS27P26-201ENST00000494583 239 ntBASIC2.32□□□□□ -2.04
HOXC4P09017 AC112204.1-201ENST00000502591 103 ntBASIC2.32□□□□□ -2.04
HOXC4P09017 AC091133.4-201ENST00000511142 308 ntBASIC2.32□□□□□ -2.04
HOXC4P09017 AC011352.1-201ENST00000512300 793 ntBASIC2.32□□□□□ -2.04
HOXC4P09017 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC2.32□□□□□ -2.04
HOXC4P09017 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC2.32□□□□□ -2.04
HOXC4P09017 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC2.32□□□□□ -2.04
HOXC4P09017 NTS-203ENST00000551529 801 ntTSL 3 BASIC2.32□□□□□ -2.04
HOXC4P09017 SNRPGP18-201ENST00000553000 214 ntBASIC2.32□□□□□ -2.04
HOXC4P09017 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC2.32□□□□□ -2.04
HOXC4P09017 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC2.32□□□□□ -2.04
HOXC4P09017 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC2.32□□□□□ -2.04
HOXC4P09017 AC138649.3-201ENST00000622154 254 ntBASIC2.32□□□□□ -2.04
HOXC4P09017 SEPT14P19-203ENST00000633205 211 ntBASIC2.32□□□□□ -2.04
HOXC4P09017 MTND5P33-201ENST00000571250 1450 ntBASIC2.32□□□□□ -2.04
HOXC4P09017 AC092881.1-201ENST00000638218 2733 ntBASIC2.32□□□□□ -2.04
HOXC4P09017 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.32□□□□□ -2.04
HOXC4P09017 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.31□□□□□ -2.04
HOXC4P09017 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
HOXC4P09017 AL161781.1-201ENST00000354277 403 ntBASIC2.31□□□□□ -2.04
HOXC4P09017 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
HOXC4P09017 RNU1-73P-201ENST00000383971 164 ntBASIC2.31□□□□□ -2.04
HOXC4P09017 SNORA80E-201ENST00000384744 137 ntBASIC2.31□□□□□ -2.04
HOXC4P09017 MIR767-201ENST00000390228 109 ntBASIC2.31□□□□□ -2.04
HOXC4P09017 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
HOXC4P09017 FCF1P10-201ENST00000407590 479 ntBASIC2.31□□□□□ -2.04
HOXC4P09017 RNA5SP181-201ENST00000410246 98 ntBASIC2.31□□□□□ -2.04
HOXC4P09017 AC007064.1-201ENST00000412238 351 ntBASIC2.31□□□□□ -2.04
HOXC4P09017 MTND1P21-201ENST00000412991 285 ntBASIC2.31□□□□□ -2.04
HOXC4P09017 MTND1P23-201ENST00000416931 372 ntBASIC2.31□□□□□ -2.04
HOXC4P09017 Z98742.3-201ENST00000418637 326 ntBASIC2.31□□□□□ -2.04
HOXC4P09017 RPL7P37-201ENST00000425095 738 ntBASIC2.31□□□□□ -2.04
HOXC4P09017 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC2.31□□□□□ -2.04
HOXC4P09017 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC2.31□□□□□ -2.04
HOXC4P09017 AC104850.1-201ENST00000435940 476 ntBASIC2.31□□□□□ -2.04
HOXC4P09017 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.31□□□□□ -2.04
HOXC4P09017 RPL22P17-201ENST00000438729 315 ntBASIC2.31□□□□□ -2.04
HOXC4P09017 AL714022.1-201ENST00000439897 151 ntBASIC2.31□□□□□ -2.04
HOXC4P09017 MTND1P1-201ENST00000445453 368 ntBASIC2.31□□□□□ -2.04
HOXC4P09017 AC079448.1-201ENST00000449377 373 ntBASIC2.31□□□□□ -2.04
HOXC4P09017 MTND2P24-201ENST00000453434 806 ntBASIC2.31□□□□□ -2.04
HOXC4P09017 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC2.31□□□□□ -2.04
HOXC4P09017 OFD1P4Y-201ENST00000455273 1179 ntBASIC2.31□□□□□ -2.04
HOXC4P09017 SNRPFP4-201ENST00000456366 242 ntBASIC2.31□□□□□ -2.04
HOXC4P09017 AC133134.1-201ENST00000466800 359 ntBASIC2.31□□□□□ -2.04
HOXC4P09017 AC104563.1-201ENST00000476147 376 ntBASIC2.31□□□□□ -2.04
HOXC4P09017 AL135752.1-201ENST00000479477 471 ntBASIC2.31□□□□□ -2.04
HOXC4P09017 TRBV12-1-201ENST00000479785 344 ntBASIC2.31□□□□□ -2.04
HOXC4P09017 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC2.31□□□□□ -2.04
HOXC4P09017 AC109927.2-201ENST00000506416 303 ntBASIC2.31□□□□□ -2.04
HOXC4P09017 AC008716.1-201ENST00000511084 513 ntBASIC2.31□□□□□ -2.04
HOXC4P09017 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC2.31□□□□□ -2.04
HOXC4P09017 RNA5SP281-201ENST00000516504 135 ntBASIC2.31□□□□□ -2.04
HOXC4P09017 RNU6-1256P-201ENST00000516539 103 ntBASIC2.31□□□□□ -2.04
HOXC4P09017 RNU6-506P-201ENST00000516553 94 ntBASIC2.31□□□□□ -2.04
HOXC4P09017 AC022616.6-201ENST00000520479 119 ntBASIC2.31□□□□□ -2.04
HOXC4P09017 AP003497.1-201ENST00000528472 562 ntBASIC2.31□□□□□ -2.04
HOXC4P09017 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC2.31□□□□□ -2.04
HOXC4P09017 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.31□□□□□ -2.04
HOXC4P09017 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC2.31□□□□□ -2.04
HOXC4P09017 MIR3118-1-201ENST00000581787 76 ntBASIC2.31□□□□□ -2.04
HOXC4P09017 AC009268.2-201ENST00000621925 457 ntBASIC2.31□□□□□ -2.04
HOXC4P09017 AL157786.1-207ENST00000627771 695 ntBASIC2.31□□□□□ -2.04
HOXC4P09017 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
HOXC4P09017 AC092447.10-201ENST00000620607 1652 ntBASIC2.31□□□□□ -2.04
HOXC4P09017 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.31□□□□□ -2.04
HOXC4P09017 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.31□□□□□ -2.04
HOXC4P09017 AC006020.1-201ENST00000420179 1854 ntBASIC2.31□□□□□ -2.04
HOXC4P09017 AC007785.2-201ENST00000598627 1916 ntBASIC2.3□□□□□ -2.04
HOXC4P09017 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
HOXC4P09017 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.3□□□□□ -2.04
HOXC4P09017 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
HOXC4P09017 RNU6-1283P-201ENST00000365314 105 ntBASIC2.3□□□□□ -2.04
HOXC4P09017 RNU5A-6P-201ENST00000384136 116 ntBASIC2.3□□□□□ -2.04
HOXC4P09017 MIR325-201ENST00000385260 98 ntBASIC2.3□□□□□ -2.04
HOXC4P09017 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
HOXC4P09017 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
HOXC4P09017 AL359704.1-201ENST00000411586 781 ntBASIC2.3□□□□□ -2.04
HOXC4P09017 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC2.3□□□□□ -2.04
HOXC4P09017 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC2.3□□□□□ -2.04
HOXC4P09017 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC2.3□□□□□ -2.04
HOXC4P09017 AL451074.3-201ENST00000437709 472 ntBASIC2.3□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 97.9 ms