Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC1.34□□□□□ -2.19
COL4A1P02462 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC1.34□□□□□ -2.19
COL4A1P02462 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC1.34□□□□□ -2.19
COL4A1P02462 RPL26P6-201ENST00000440913 438 ntBASIC1.34□□□□□ -2.19
COL4A1P02462 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC1.34□□□□□ -2.19
COL4A1P02462 MTND1P31-201ENST00000449206 961 ntBASIC1.34□□□□□ -2.19
COL4A1P02462 RNU7-136P-201ENST00000458819 69 ntBASIC1.34□□□□□ -2.19
COL4A1P02462 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC1.34□□□□□ -2.19
COL4A1P02462 RNA5SP436-201ENST00000516020 115 ntBASIC1.34□□□□□ -2.19
COL4A1P02462 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
COL4A1P02462 TMF1P1-201ENST00000576058 373 ntBASIC1.34□□□□□ -2.19
COL4A1P02462 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC1.34□□□□□ -2.19
COL4A1P02462 AC011451.2-201ENST00000604303 598 ntBASIC1.34□□□□□ -2.19
COL4A1P02462 AL390208.1-201ENST00000605885 644 ntBASIC1.34□□□□□ -2.19
COL4A1P02462 AC018645.2-201ENST00000609151 472 ntBASIC1.34□□□□□ -2.19
COL4A1P02462 AC099654.8-201ENST00000637757 681 ntBASIC1.34□□□□□ -2.19
COL4A1P02462 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC1.33□□□□□ -2.2
COL4A1P02462 SLC10A5P1-201ENST00000379063 1306 ntBASIC1.33□□□□□ -2.2
COL4A1P02462 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
COL4A1P02462 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
COL4A1P02462 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC1.33□□□□□ -2.2
COL4A1P02462 AC092573.2-201ENST00000434546 243 ntBASIC1.33□□□□□ -2.2
COL4A1P02462 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC1.33□□□□□ -2.2
COL4A1P02462 MTCO1P53-201ENST00000441633 699 ntBASIC1.33□□□□□ -2.2
COL4A1P02462 EEF1E1P1-201ENST00000446998 430 ntBASIC1.33□□□□□ -2.2
COL4A1P02462 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.33□□□□□ -2.2
COL4A1P02462 RPS20P20-201ENST00000460498 340 ntBASIC1.33□□□□□ -2.2
COL4A1P02462 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC1.33□□□□□ -2.2
COL4A1P02462 MTND3P3-201ENST00000505004 126 ntBASIC1.33□□□□□ -2.2
COL4A1P02462 AC116353.3-201ENST00000511215 249 ntBASIC1.33□□□□□ -2.2
COL4A1P02462 MTCYBP23-201ENST00000558717 1102 ntBASIC1.33□□□□□ -2.2
COL4A1P02462 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC1.33□□□□□ -2.2
COL4A1P02462 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC1.33□□□□□ -2.2
COL4A1P02462 AC004853.1-201ENST00000604902 698 ntBASIC1.33□□□□□ -2.2
COL4A1P02462 AC097468.3-201ENST00000607956 456 ntBASIC1.33□□□□□ -2.2
COL4A1P02462 AC004067.1-201ENST00000608733 700 ntBASIC1.33□□□□□ -2.2
COL4A1P02462 AC027309.3-201ENST00000623419 351 ntBASIC1.33□□□□□ -2.2
COL4A1P02462 AC090772.4-201ENST00000623599 362 ntBASIC1.33□□□□□ -2.2
COL4A1P02462 AC019226.1-201ENST00000625666 515 ntBASIC1.33□□□□□ -2.2
COL4A1P02462 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
COL4A1P02462 AL022578.1-201ENST00000439330 1433 ntBASIC1.33□□□□□ -2.2
COL4A1P02462 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
COL4A1P02462 RNU6-289P-201ENST00000364093 107 ntBASIC1.32□□□□□ -2.2
COL4A1P02462 RNU6-1207P-201ENST00000384343 107 ntBASIC1.32□□□□□ -2.2
COL4A1P02462 DHFRP6-201ENST00000401776 268 ntBASIC1.32□□□□□ -2.2
COL4A1P02462 RPS3AP24-201ENST00000407896 734 ntBASIC1.32□□□□□ -2.2
COL4A1P02462 MIR1285-1-201ENST00000408593 84 ntBASIC1.32□□□□□ -2.2
COL4A1P02462 RNU2-43P-201ENST00000410306 190 ntBASIC1.32□□□□□ -2.2
COL4A1P02462 RPS3AP37-201ENST00000419176 745 ntBASIC1.32□□□□□ -2.2
COL4A1P02462 AL356867.1-201ENST00000429623 299 ntBASIC1.32□□□□□ -2.2
COL4A1P02462 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC1.32□□□□□ -2.2
COL4A1P02462 ZNF736P1Y-201ENST00000440402 1276 ntBASIC1.32□□□□□ -2.2
COL4A1P02462 AL359385.1-201ENST00000456509 365 ntBASIC1.32□□□□□ -2.2
COL4A1P02462 AC108729.1-201ENST00000487812 947 ntBASIC1.32□□□□□ -2.2
COL4A1P02462 AC093677.1-201ENST00000514414 678 ntBASIC1.32□□□□□ -2.2
COL4A1P02462 RNA5SP476-201ENST00000516613 103 ntBASIC1.32□□□□□ -2.2
COL4A1P02462 RNU6-528P-201ENST00000516926 100 ntBASIC1.32□□□□□ -2.2
COL4A1P02462 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.32□□□□□ -2.2
COL4A1P02462 MAL2-206ENST00000522187 547 ntTSL 4 BASIC1.32□□□□□ -2.2
COL4A1P02462 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC1.32□□□□□ -2.2
COL4A1P02462 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC1.32□□□□□ -2.2
COL4A1P02462 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC1.32□□□□□ -2.2
COL4A1P02462 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC1.32□□□□□ -2.2
COL4A1P02462 AC090615.1-201ENST00000577519 154 ntBASIC1.32□□□□□ -2.2
COL4A1P02462 MIR3973-201ENST00000579824 107 ntBASIC1.32□□□□□ -2.2
COL4A1P02462 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC1.32□□□□□ -2.2
COL4A1P02462 AC091057.3-201ENST00000602684 733 ntBASIC1.32□□□□□ -2.2
COL4A1P02462 BBIP1P1-201ENST00000602999 279 ntBASIC1.32□□□□□ -2.2
COL4A1P02462 AC006270.3-201ENST00000605967 1036 ntBASIC1.32□□□□□ -2.2
COL4A1P02462 AL596245.1-201ENST00000618994 362 ntBASIC1.32□□□□□ -2.2
COL4A1P02462 AL121895.2-201ENST00000619558 447 ntBASIC1.32□□□□□ -2.2
COL4A1P02462 AL162373.1-201ENST00000620433 407 ntBASIC1.32□□□□□ -2.2
COL4A1P02462 AC009812.4-201ENST00000569134 1805 ntBASIC1.32□□□□□ -2.2
COL4A1P02462 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
COL4A1P02462 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
COL4A1P02462 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.32□□□□□ -2.2
COL4A1P02462 MIR513A1-201ENST00000385138 129 ntBASIC1.32□□□□□ -2.2
COL4A1P02462 RNU6-882P-201ENST00000391025 103 ntBASIC1.32□□□□□ -2.2
COL4A1P02462 HMGB1P17-201ENST00000403495 628 ntBASIC1.32□□□□□ -2.2
COL4A1P02462 RNU6-193P-201ENST00000410977 107 ntBASIC1.32□□□□□ -2.2
COL4A1P02462 USP9YP33-201ENST00000412220 421 ntBASIC1.32□□□□□ -2.2
COL4A1P02462 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC1.32□□□□□ -2.2
COL4A1P02462 AL139421.1-201ENST00000423010 169 ntBASIC1.32□□□□□ -2.2
COL4A1P02462 RPL27AP8-201ENST00000424277 446 ntBASIC1.32□□□□□ -2.2
COL4A1P02462 USP9YP35-201ENST00000435696 412 ntBASIC1.32□□□□□ -2.2
COL4A1P02462 AL360221.1-201ENST00000445989 335 ntBASIC1.32□□□□□ -2.2
COL4A1P02462 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC1.32□□□□□ -2.2
COL4A1P02462 SNRPGP6-201ENST00000451124 220 ntBASIC1.32□□□□□ -2.2
COL4A1P02462 AC010099.1-201ENST00000455434 375 ntBASIC1.32□□□□□ -2.2
COL4A1P02462 AC108059.3-201ENST00000456388 214 ntBASIC1.32□□□□□ -2.2
COL4A1P02462 USP9YP25-201ENST00000457708 443 ntBASIC1.32□□□□□ -2.2
COL4A1P02462 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC1.32□□□□□ -2.2
COL4A1P02462 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC1.32□□□□□ -2.2
COL4A1P02462 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC1.32□□□□□ -2.2
COL4A1P02462 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
COL4A1P02462 DUXAP5-201ENST00000529668 529 ntBASIC1.32□□□□□ -2.2
COL4A1P02462 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC1.32□□□□□ -2.2
COL4A1P02462 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC1.32□□□□□ -2.2
COL4A1P02462 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC1.32□□□□□ -2.2
COL4A1P02462 GLYCAM1-201ENST00000546596 285 ntBASIC1.32□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 139.2 ms