Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.89□□□□□ -1.95
GGPS1O95749 AL161431.1-201ENST00000618966 4205 ntBASIC2.89□□□□□ -1.95
GGPS1O95749 RNU6-1180P-201ENST00000364935 107 ntBASIC2.89□□□□□ -1.95
GGPS1O95749 RNU6-169P-201ENST00000365336 107 ntBASIC2.89□□□□□ -1.95
GGPS1O95749 U8.9-201ENST00000365667 134 ntBASIC2.89□□□□□ -1.95
GGPS1O95749 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
GGPS1O95749 SET-203ENST00000372688 801 ntTSL 2 BASIC2.89□□□□□ -1.95
GGPS1O95749 USP9YP20-201ENST00000419224 558 ntBASIC2.89□□□□□ -1.95
GGPS1O95749 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC2.89□□□□□ -1.95
GGPS1O95749 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC2.89□□□□□ -1.95
GGPS1O95749 FABP5P13-201ENST00000452144 328 ntBASIC2.89□□□□□ -1.95
GGPS1O95749 AC117522.1-201ENST00000509821 380 ntBASIC2.89□□□□□ -1.95
GGPS1O95749 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.89□□□□□ -1.95
GGPS1O95749 AC108078.2-201ENST00000510750 236 ntBASIC2.89□□□□□ -1.95
GGPS1O95749 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC2.89□□□□□ -1.95
GGPS1O95749 RNU5F-8P-201ENST00000515941 111 ntBASIC2.89□□□□□ -1.95
GGPS1O95749 SCARNA24.1-201ENST00000516465 137 ntBASIC2.89□□□□□ -1.95
GGPS1O95749 AC025755.1-201ENST00000521306 278 ntBASIC2.89□□□□□ -1.95
GGPS1O95749 AP002453.2-201ENST00000533503 320 ntBASIC2.89□□□□□ -1.95
GGPS1O95749 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC2.89□□□□□ -1.95
GGPS1O95749 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC2.89□□□□□ -1.95
GGPS1O95749 AL512310.1-201ENST00000548639 172 ntBASIC2.89□□□□□ -1.95
GGPS1O95749 AL157871.3-201ENST00000557231 293 ntBASIC2.89□□□□□ -1.95
GGPS1O95749 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.89□□□□□ -1.95
GGPS1O95749 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC2.89□□□□□ -1.95
GGPS1O95749 MIR1273C-201ENST00000578669 77 ntBASIC2.89□□□□□ -1.95
GGPS1O95749 AC103810.1-201ENST00000579873 453 ntBASIC2.89□□□□□ -1.95
GGPS1O95749 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC2.89□□□□□ -1.95
GGPS1O95749 AL391813.1-201ENST00000603098 260 ntBASIC2.89□□□□□ -1.95
GGPS1O95749 SEPT7P9-203ENST00000604116 343 ntBASIC2.89□□□□□ -1.95
GGPS1O95749 AC090578.1-201ENST00000604955 591 ntBASIC2.89□□□□□ -1.95
GGPS1O95749 AL359547.2-201ENST00000615810 418 ntBASIC2.89□□□□□ -1.95
GGPS1O95749 AC110994.2-201ENST00000635481 492 ntBASIC2.89□□□□□ -1.95
GGPS1O95749 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC2.88□□□□□ -1.95
GGPS1O95749 RNU6-641P-201ENST00000384006 107 ntBASIC2.88□□□□□ -1.95
GGPS1O95749 MIR27B-201ENST00000385129 97 ntBASIC2.88□□□□□ -1.95
GGPS1O95749 RN7SKP142-201ENST00000411236 328 ntBASIC2.88□□□□□ -1.95
GGPS1O95749 RNU6-195P-201ENST00000411352 109 ntBASIC2.88□□□□□ -1.95
GGPS1O95749 AC114491.1-201ENST00000416095 246 ntBASIC2.88□□□□□ -1.95
GGPS1O95749 AC009518.2-201ENST00000418056 731 ntBASIC2.88□□□□□ -1.95
GGPS1O95749 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC2.88□□□□□ -1.95
GGPS1O95749 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC2.88□□□□□ -1.95
GGPS1O95749 DPPA3P1-201ENST00000448050 469 ntBASIC2.88□□□□□ -1.95
GGPS1O95749 RGS5-217ENST00000451759 835 ntTSL 3 BASIC2.88□□□□□ -1.95
GGPS1O95749 RPL23AP70-201ENST00000483361 460 ntBASIC2.88□□□□□ -1.95
GGPS1O95749 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC2.88□□□□□ -1.95
GGPS1O95749 AC008413.1-201ENST00000511864 177 ntBASIC2.88□□□□□ -1.95
GGPS1O95749 AC022447.1-201ENST00000515358 464 ntBASIC2.88□□□□□ -1.95
GGPS1O95749 RN7SKP24-201ENST00000515888 284 ntBASIC2.88□□□□□ -1.95
GGPS1O95749 RNU6-572P-201ENST00000516724 80 ntBASIC2.88□□□□□ -1.95
GGPS1O95749 AC109329.2-201ENST00000519658 482 ntBASIC2.88□□□□□ -1.95
GGPS1O95749 AC087883.1-201ENST00000551882 391 ntBASIC2.88□□□□□ -1.95
GGPS1O95749 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.88□□□□□ -1.95
GGPS1O95749 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC2.88□□□□□ -1.95
GGPS1O95749 AC137800.2-201ENST00000574375 120 ntBASIC2.88□□□□□ -1.95
GGPS1O95749 MIR4782-201ENST00000577987 79 ntBASIC2.88□□□□□ -1.95
GGPS1O95749 AC007621.1-201ENST00000604544 437 ntBASIC2.88□□□□□ -1.95
GGPS1O95749 AC116312.1-201ENST00000606841 314 ntBASIC2.88□□□□□ -1.95
GGPS1O95749 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.88□□□□□ -1.95
GGPS1O95749 AC012409.4-201ENST00000612923 249 ntBASIC2.88□□□□□ -1.95
GGPS1O95749 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.88□□□□□ -1.95
GGPS1O95749 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.88□□□□□ -1.95
GGPS1O95749 TEX21P-201ENST00000447107 1476 ntBASIC2.88□□□□□ -1.95
GGPS1O95749 AC103710.2-202ENST00000641454 2853 ntBASIC2.88□□□□□ -1.95
GGPS1O95749 Y_RNA.33-201ENST00000362591 102 ntBASIC2.87□□□□□ -1.95
GGPS1O95749 RNU6-461P-201ENST00000364195 107 ntBASIC2.87□□□□□ -1.95
GGPS1O95749 Z98749.2-208ENST00000381646 500 ntBASIC2.87□□□□□ -1.95
GGPS1O95749 SNORA24.1-201ENST00000384401 135 ntBASIC2.87□□□□□ -1.95
GGPS1O95749 RNU6-1025P-201ENST00000410629 104 ntBASIC2.87□□□□□ -1.95
GGPS1O95749 USP9YP6-201ENST00000413550 854 ntBASIC2.87□□□□□ -1.95
GGPS1O95749 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC2.87□□□□□ -1.95
GGPS1O95749 OR51A5P-201ENST00000415429 942 ntBASIC2.87□□□□□ -1.95
GGPS1O95749 MTND3P17-201ENST00000416968 344 ntBASIC2.87□□□□□ -1.95
GGPS1O95749 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.87□□□□□ -1.95
GGPS1O95749 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC2.87□□□□□ -1.95
GGPS1O95749 ISCA1P6-201ENST00000427740 390 ntBASIC2.87□□□□□ -1.95
GGPS1O95749 AC098826.1-201ENST00000433943 471 ntBASIC2.87□□□□□ -1.95
GGPS1O95749 AL353706.1-201ENST00000436728 494 ntBASIC2.87□□□□□ -1.95
GGPS1O95749 RPL21P2-201ENST00000440049 481 ntBASIC2.87□□□□□ -1.95
GGPS1O95749 AL161651.1-201ENST00000440882 223 ntBASIC2.87□□□□□ -1.95
GGPS1O95749 MTND2P4-201ENST00000445034 1004 ntBASIC2.87□□□□□ -1.95
GGPS1O95749 AC003071.1-201ENST00000451219 789 ntBASIC2.87□□□□□ -1.95
GGPS1O95749 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC2.87□□□□□ -1.95
GGPS1O95749 CACYBPP2-201ENST00000453625 678 ntBASIC2.87□□□□□ -1.95
GGPS1O95749 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC2.87□□□□□ -1.95
GGPS1O95749 AC008571.1-201ENST00000467232 300 ntBASIC2.87□□□□□ -1.95
GGPS1O95749 LAMTOR3P2-201ENST00000504479 232 ntBASIC2.87□□□□□ -1.95
GGPS1O95749 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.87□□□□□ -1.95
GGPS1O95749 SNORA18.6-201ENST00000516792 115 ntBASIC2.87□□□□□ -1.95
GGPS1O95749 SNORA31.19-201ENST00000517079 126 ntBASIC2.87□□□□□ -1.95
GGPS1O95749 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC2.87□□□□□ -1.95
GGPS1O95749 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.87□□□□□ -1.95
GGPS1O95749 AC090572.1-201ENST00000519251 160 ntBASIC2.87□□□□□ -1.95
GGPS1O95749 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.87□□□□□ -1.95
GGPS1O95749 AP003072.2-201ENST00000527756 676 ntBASIC2.87□□□□□ -1.95
GGPS1O95749 AC090616.3-201ENST00000582184 217 ntBASIC2.87□□□□□ -1.95
GGPS1O95749 AC005261.5-201ENST00000596280 355 ntBASIC2.87□□□□□ -1.95
GGPS1O95749 AL139286.2-201ENST00000606838 396 ntBASIC2.87□□□□□ -1.95
GGPS1O95749 AL158063.1-201ENST00000615349 536 ntBASIC2.87□□□□□ -1.95
GGPS1O95749 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.87□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 86.7 ms