Protein–RNA interactions for Protein: O95476

CTDNEP1, CTD nuclear envelope phosphatase 1, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1O95476 AL139397.2-201ENST00000404529 772 ntBASIC2.07□□□□□ -2.08
CTDNEP1O95476 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC2.07□□□□□ -2.08
CTDNEP1O95476 AL358453.1-201ENST00000422522 250 ntBASIC2.07□□□□□ -2.08
CTDNEP1O95476 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC2.07□□□□□ -2.08
CTDNEP1O95476 RPS6P15-201ENST00000431996 751 ntBASIC2.07□□□□□ -2.08
CTDNEP1O95476 AC005094.1-201ENST00000440420 368 ntBASIC2.07□□□□□ -2.08
CTDNEP1O95476 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC2.07□□□□□ -2.08
CTDNEP1O95476 MTCO3P45-201ENST00000443036 613 ntBASIC2.07□□□□□ -2.08
CTDNEP1O95476 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC2.07□□□□□ -2.08
CTDNEP1O95476 RPS29P20-201ENST00000489592 171 ntBASIC2.07□□□□□ -2.08
CTDNEP1O95476 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC2.07□□□□□ -2.08
CTDNEP1O95476 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
CTDNEP1O95476 MTND1P22-201ENST00000510572 951 ntBASIC2.07□□□□□ -2.08
CTDNEP1O95476 AF131216.2-201ENST00000512316 564 ntBASIC2.07□□□□□ -2.08
CTDNEP1O95476 RNU6-64P-201ENST00000517119 105 ntBASIC2.07□□□□□ -2.08
CTDNEP1O95476 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.07□□□□□ -2.08
CTDNEP1O95476 AC107934.1-201ENST00000522215 217 ntBASIC2.07□□□□□ -2.08
CTDNEP1O95476 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.07□□□□□ -2.08
CTDNEP1O95476 AP000907.2-201ENST00000530827 353 ntBASIC2.07□□□□□ -2.08
CTDNEP1O95476 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC2.07□□□□□ -2.08
CTDNEP1O95476 AK6P1-201ENST00000540219 478 ntBASIC2.07□□□□□ -2.08
CTDNEP1O95476 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC2.07□□□□□ -2.08
CTDNEP1O95476 PCMTD1P2-201ENST00000565017 355 ntBASIC2.07□□□□□ -2.08
CTDNEP1O95476 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC2.07□□□□□ -2.08
CTDNEP1O95476 OR10AB1P-201ENST00000609613 938 ntBASIC2.07□□□□□ -2.08
CTDNEP1O95476 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC2.07□□□□□ -2.08
CTDNEP1O95476 AC010133.1-201ENST00000615809 842 ntBASIC2.07□□□□□ -2.08
CTDNEP1O95476 AC027807.2-201ENST00000616099 408 ntBASIC2.07□□□□□ -2.08
CTDNEP1O95476 AL603755.1-201ENST00000619504 163 ntBASIC2.07□□□□□ -2.08
CTDNEP1O95476 AC022079.1-201ENST00000621546 602 ntBASIC2.07□□□□□ -2.08
CTDNEP1O95476 uc_338.20-201ENST00000621563 178 ntBASIC2.07□□□□□ -2.08
CTDNEP1O95476 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC2.07□□□□□ -2.08
CTDNEP1O95476 AC097655.1-201ENST00000635075 318 ntBASIC2.07□□□□□ -2.08
CTDNEP1O95476 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.07□□□□□ -2.08
CTDNEP1O95476 AC007785.2-201ENST00000598627 1916 ntBASIC2.07□□□□□ -2.08
CTDNEP1O95476 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.06□□□□□ -2.08
CTDNEP1O95476 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC2.06□□□□□ -2.08
CTDNEP1O95476 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.06□□□□□ -2.08
CTDNEP1O95476 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.06□□□□□ -2.08
CTDNEP1O95476 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
CTDNEP1O95476 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
CTDNEP1O95476 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
CTDNEP1O95476 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC2.06□□□□□ -2.08
CTDNEP1O95476 AL049545.1-201ENST00000401856 572 ntBASIC2.06□□□□□ -2.08
CTDNEP1O95476 MTND2P18-201ENST00000419962 1030 ntBASIC2.06□□□□□ -2.08
CTDNEP1O95476 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC2.06□□□□□ -2.08
CTDNEP1O95476 AL451054.2-201ENST00000420896 202 ntBASIC2.06□□□□□ -2.08
CTDNEP1O95476 AL445685.2-201ENST00000422551 342 ntBASIC2.06□□□□□ -2.08
CTDNEP1O95476 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC2.06□□□□□ -2.08
CTDNEP1O95476 RPL35AP22-201ENST00000436855 335 ntBASIC2.06□□□□□ -2.08
CTDNEP1O95476 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC2.06□□□□□ -2.08
CTDNEP1O95476 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC2.06□□□□□ -2.08
CTDNEP1O95476 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC2.06□□□□□ -2.08
CTDNEP1O95476 AC008481.1-201ENST00000463278 396 ntBASIC2.06□□□□□ -2.08
CTDNEP1O95476 MTND3P7-201ENST00000474435 343 ntBASIC2.06□□□□□ -2.08
CTDNEP1O95476 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC2.06□□□□□ -2.08
CTDNEP1O95476 RNA5SP182-201ENST00000516064 82 ntBASIC2.06□□□□□ -2.08
CTDNEP1O95476 AC124947.2-202ENST00000552735 133 ntBASIC2.06□□□□□ -2.08
CTDNEP1O95476 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC2.06□□□□□ -2.08
CTDNEP1O95476 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC2.06□□□□□ -2.08
CTDNEP1O95476 MIR3945-201ENST00000581853 98 ntBASIC2.06□□□□□ -2.08
CTDNEP1O95476 MIR548AB-201ENST00000584917 84 ntBASIC2.06□□□□□ -2.08
CTDNEP1O95476 AF038458.1-201ENST00000588406 262 ntBASIC2.06□□□□□ -2.08
CTDNEP1O95476 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC2.06□□□□□ -2.08
CTDNEP1O95476 AL031775.1-201ENST00000607014 887 ntBASIC2.06□□□□□ -2.08
CTDNEP1O95476 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC2.06□□□□□ -2.08
CTDNEP1O95476 AC005332.10-201ENST00000612725 619 ntBASIC2.06□□□□□ -2.08
CTDNEP1O95476 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC2.06□□□□□ -2.08
CTDNEP1O95476 AC012640.5-201ENST00000623897 319 ntBASIC2.06□□□□□ -2.08
CTDNEP1O95476 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC2.06□□□□□ -2.08
CTDNEP1O95476 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.06□□□□□ -2.08
CTDNEP1O95476 MIR7515-201ENST00000637837 67 ntBASIC2.06□□□□□ -2.08
CTDNEP1O95476 AC004944.1-201ENST00000517807 3059 ntBASIC2.06□□□□□ -2.08
CTDNEP1O95476 RNU4-21P-201ENST00000362802 126 ntBASIC2.05□□□□□ -2.08
CTDNEP1O95476 RNU5A-8P-201ENST00000364102 114 ntBASIC2.05□□□□□ -2.08
CTDNEP1O95476 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC2.05□□□□□ -2.08
CTDNEP1O95476 RNU6-533P-201ENST00000384144 107 ntBASIC2.05□□□□□ -2.08
CTDNEP1O95476 SNORA40.18-201ENST00000391200 128 ntBASIC2.05□□□□□ -2.08
CTDNEP1O95476 AL355497.1-201ENST00000406262 551 ntBASIC2.05□□□□□ -2.08
CTDNEP1O95476 TXNP7-201ENST00000406296 293 ntBASIC2.05□□□□□ -2.08
CTDNEP1O95476 RPL21P24-201ENST00000413752 448 ntBASIC2.05□□□□□ -2.08
CTDNEP1O95476 Z99497.1-201ENST00000421282 135 ntBASIC2.05□□□□□ -2.08
CTDNEP1O95476 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC2.05□□□□□ -2.08
CTDNEP1O95476 TIMM9P1-201ENST00000436122 256 ntBASIC2.05□□□□□ -2.08
CTDNEP1O95476 RPL7P54-201ENST00000438336 674 ntBASIC2.05□□□□□ -2.08
CTDNEP1O95476 RPL32P28-201ENST00000443577 397 ntBASIC2.05□□□□□ -2.08
CTDNEP1O95476 RPS27AP8-201ENST00000452665 445 ntBASIC2.05□□□□□ -2.08
CTDNEP1O95476 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC2.05□□□□□ -2.08
CTDNEP1O95476 RNU7-59P-201ENST00000459101 61 ntBASIC2.05□□□□□ -2.08
CTDNEP1O95476 RPS20P20-201ENST00000460498 340 ntBASIC2.05□□□□□ -2.08
CTDNEP1O95476 AC107626.1-201ENST00000471084 183 ntBASIC2.05□□□□□ -2.08
CTDNEP1O95476 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC2.05□□□□□ -2.08
CTDNEP1O95476 TRBV1-201ENST00000476502 284 ntBASIC2.05□□□□□ -2.08
CTDNEP1O95476 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC2.05□□□□□ -2.08
CTDNEP1O95476 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC2.05□□□□□ -2.08
CTDNEP1O95476 RNU6-201P-201ENST00000517100 61 ntBASIC2.05□□□□□ -2.08
CTDNEP1O95476 AC106038.2-201ENST00000520706 568 ntBASIC2.05□□□□□ -2.08
CTDNEP1O95476 AC060788.1-201ENST00000521318 469 ntBASIC2.05□□□□□ -2.08
CTDNEP1O95476 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC2.05□□□□□ -2.08
CTDNEP1O95476 MTND4LP18-201ENST00000526864 291 ntBASIC2.05□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 139.7 ms