Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.92□□□□□ -1.94
BEST1O76090 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC2.92□□□□□ -1.94
BEST1O76090 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
BEST1O76090 SNORA5B-201ENST00000363786 132 ntBASIC2.92□□□□□ -1.94
BEST1O76090 SNORD56.5-201ENST00000364281 72 ntBASIC2.92□□□□□ -1.94
BEST1O76090 SNORD115-7-201ENST00000365306 82 ntBASIC2.92□□□□□ -1.94
BEST1O76090 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
BEST1O76090 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
BEST1O76090 AL138827.1-201ENST00000402666 306 ntBASIC2.92□□□□□ -1.94
BEST1O76090 RNA5SP111-201ENST00000411386 101 ntBASIC2.92□□□□□ -1.94
BEST1O76090 CDK8P2-201ENST00000415020 547 ntBASIC2.92□□□□□ -1.94
BEST1O76090 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC2.92□□□□□ -1.94
BEST1O76090 NDUFB1P2-201ENST00000449477 176 ntBASIC2.92□□□□□ -1.94
BEST1O76090 RN7SL283P-201ENST00000489055 303 ntBASIC2.92□□□□□ -1.94
BEST1O76090 AC022493.1-201ENST00000492984 337 ntBASIC2.92□□□□□ -1.94
BEST1O76090 SNORA31.18-201ENST00000517043 134 ntBASIC2.92□□□□□ -1.94
BEST1O76090 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC2.92□□□□□ -1.94
BEST1O76090 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.92□□□□□ -1.94
BEST1O76090 AC234778.2-201ENST00000566241 354 ntBASIC2.92□□□□□ -1.94
BEST1O76090 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
BEST1O76090 NRBF2P5-201ENST00000603087 788 ntBASIC2.92□□□□□ -1.94
BEST1O76090 AL645944.1-201ENST00000603857 493 ntBASIC2.92□□□□□ -1.94
BEST1O76090 AC087045.1-201ENST00000605856 382 ntBASIC2.92□□□□□ -1.94
BEST1O76090 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.92□□□□□ -1.94
BEST1O76090 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
BEST1O76090 AC009161.2-201ENST00000624626 138 ntBASIC2.92□□□□□ -1.94
BEST1O76090 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.92□□□□□ -1.94
BEST1O76090 MTND5P19-201ENST00000424872 1794 ntBASIC2.92□□□□□ -1.94
BEST1O76090 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
BEST1O76090 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
BEST1O76090 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.91□□□□□ -1.94
BEST1O76090 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC2.91□□□□□ -1.94
BEST1O76090 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
BEST1O76090 RPL9P7-201ENST00000330965 580 ntBASIC2.91□□□□□ -1.94
BEST1O76090 RNU6-1280P-201ENST00000365211 107 ntBASIC2.91□□□□□ -1.94
BEST1O76090 RNU6-282P-201ENST00000365357 103 ntBASIC2.91□□□□□ -1.94
BEST1O76090 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC2.91□□□□□ -1.94
BEST1O76090 SET-203ENST00000372688 801 ntTSL 2 BASIC2.91□□□□□ -1.94
BEST1O76090 RNU6-456P-201ENST00000384493 107 ntBASIC2.91□□□□□ -1.94
BEST1O76090 Y_RNA.510-201ENST00000384511 114 ntBASIC2.91□□□□□ -1.94
BEST1O76090 Y_RNA.576-201ENST00000384781 102 ntBASIC2.91□□□□□ -1.94
BEST1O76090 UBE2V1P2-201ENST00000397758 440 ntBASIC2.91□□□□□ -1.94
BEST1O76090 RNU2-52P-201ENST00000410680 190 ntBASIC2.91□□□□□ -1.94
BEST1O76090 RNU2-25P-201ENST00000411041 191 ntBASIC2.91□□□□□ -1.94
BEST1O76090 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC2.91□□□□□ -1.94
BEST1O76090 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.91□□□□□ -1.94
BEST1O76090 PTGES3P4-201ENST00000426243 356 ntBASIC2.91□□□□□ -1.94
BEST1O76090 AC092427.1-202ENST00000430569 476 ntBASIC2.91□□□□□ -1.94
BEST1O76090 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC2.91□□□□□ -1.94
BEST1O76090 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC2.91□□□□□ -1.94
BEST1O76090 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC2.91□□□□□ -1.94
BEST1O76090 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.91□□□□□ -1.94
BEST1O76090 AC132479.1-201ENST00000449160 144 ntBASIC2.91□□□□□ -1.94
BEST1O76090 AC092001.1-201ENST00000453012 261 ntBASIC2.91□□□□□ -1.94
BEST1O76090 C1DP4-201ENST00000455429 424 ntBASIC2.91□□□□□ -1.94
BEST1O76090 AL441985.1-201ENST00000457727 251 ntBASIC2.91□□□□□ -1.94
BEST1O76090 RNU7-182P-201ENST00000459009 62 ntBASIC2.91□□□□□ -1.94
BEST1O76090 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC2.91□□□□□ -1.94
BEST1O76090 AC023194.1-201ENST00000493084 308 ntBASIC2.91□□□□□ -1.94
BEST1O76090 AC104806.1-201ENST00000508720 308 ntBASIC2.91□□□□□ -1.94
BEST1O76090 AC079140.3-201ENST00000511111 550 ntBASIC2.91□□□□□ -1.94
BEST1O76090 RN7SKP298-201ENST00000515950 94 ntBASIC2.91□□□□□ -1.94
BEST1O76090 AP002963.1-201ENST00000530590 184 ntBASIC2.91□□□□□ -1.94
BEST1O76090 OR5AL2P-201ENST00000532185 920 ntBASIC2.91□□□□□ -1.94
BEST1O76090 MIR3616-201ENST00000584070 92 ntBASIC2.91□□□□□ -1.94
BEST1O76090 ZNF861P-201ENST00000588126 639 ntBASIC2.91□□□□□ -1.94
BEST1O76090 RSL24D1P11-201ENST00000591045 491 ntBASIC2.91□□□□□ -1.94
BEST1O76090 Z84480.1-201ENST00000605131 311 ntBASIC2.91□□□□□ -1.94
BEST1O76090 AL670379.4-201ENST00000605279 254 ntBASIC2.91□□□□□ -1.94
BEST1O76090 AC245008.1-201ENST00000608123 476 ntBASIC2.91□□□□□ -1.94
BEST1O76090 AC005046.1-201ENST00000608515 625 ntBASIC2.91□□□□□ -1.94
BEST1O76090 uc_338.14-201ENST00000613162 166 ntBASIC2.91□□□□□ -1.94
BEST1O76090 AC091834.1-201ENST00000614543 472 ntBASIC2.91□□□□□ -1.94
BEST1O76090 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.91□□□□□ -1.94
BEST1O76090 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.91□□□□□ -1.94
BEST1O76090 uc_338.11-201ENST00000619132 160 ntBASIC2.91□□□□□ -1.94
BEST1O76090 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.91□□□□□ -1.94
BEST1O76090 SEPT14P19-203ENST00000633205 211 ntBASIC2.91□□□□□ -1.94
BEST1O76090 LRRC77P-213ENST00000637727 880 ntBASIC2.91□□□□□ -1.94
BEST1O76090 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.91□□□□□ -1.94
BEST1O76090 CKAP2P1-201ENST00000555477 2049 ntBASIC2.91□□□□□ -1.94
BEST1O76090 ANKRD36BP1-202ENST00000604892 1417 ntBASIC2.91□□□□□ -1.94
BEST1O76090 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
BEST1O76090 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.91□□□□□ -1.94
BEST1O76090 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.91□□□□□ -1.94
BEST1O76090 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.9□□□□□ -1.94
BEST1O76090 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
BEST1O76090 RNU6-461P-201ENST00000364195 107 ntBASIC2.9□□□□□ -1.95
BEST1O76090 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.9□□□□□ -1.95
BEST1O76090 MIR518D-201ENST00000385014 87 ntBASIC2.9□□□□□ -1.95
BEST1O76090 AL360182.1-201ENST00000397433 468 ntBASIC2.9□□□□□ -1.95
BEST1O76090 RN7SKP123-201ENST00000410732 291 ntBASIC2.9□□□□□ -1.95
BEST1O76090 Y_RNA.623-201ENST00000411128 95 ntBASIC2.9□□□□□ -1.95
BEST1O76090 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.9□□□□□ -1.95
BEST1O76090 AL031779.1-201ENST00000415663 330 ntBASIC2.9□□□□□ -1.95
BEST1O76090 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC2.9□□□□□ -1.95
BEST1O76090 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC2.9□□□□□ -1.95
BEST1O76090 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.9□□□□□ -1.95
BEST1O76090 AL627311.1-201ENST00000431514 115 ntBASIC2.9□□□□□ -1.95
BEST1O76090 AC112220.1-201ENST00000434628 355 ntBASIC2.9□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 133.4 ms