Protein–RNA interactions for Protein: O60391

GRIN3B, Glutamate receptor ionotropic, NMDA 3B, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN3BO60391 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.7□□□□□ -1.66
GRIN3BO60391 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
GRIN3BO60391 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
GRIN3BO60391 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.7□□□□□ -1.66
GRIN3BO60391 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
GRIN3BO60391 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
GRIN3BO60391 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
GRIN3BO60391 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.69□□□□□ -1.66
GRIN3BO60391 RNU6-379P-201ENST00000363813 104 ntBASIC4.69□□□□□ -1.66
GRIN3BO60391 MIR578-201ENST00000384828 96 ntBASIC4.69□□□□□ -1.66
GRIN3BO60391 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
GRIN3BO60391 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC4.69□□□□□ -1.66
GRIN3BO60391 RPS12P23-201ENST00000419579 400 ntBASIC4.69□□□□□ -1.66
GRIN3BO60391 AC008267.5-201ENST00000424928 265 ntBASIC4.69□□□□□ -1.66
GRIN3BO60391 USP9YP30-201ENST00000430729 455 ntBASIC4.69□□□□□ -1.66
GRIN3BO60391 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC4.69□□□□□ -1.66
GRIN3BO60391 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC4.69□□□□□ -1.66
GRIN3BO60391 U8.20-201ENST00000459445 131 ntBASIC4.69□□□□□ -1.66
GRIN3BO60391 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC4.69□□□□□ -1.66
GRIN3BO60391 AC068781.1-201ENST00000488231 618 ntBASIC4.69□□□□□ -1.66
GRIN3BO60391 AC015911.1-201ENST00000495111 156 ntBASIC4.69□□□□□ -1.66
GRIN3BO60391 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC4.69□□□□□ -1.66
GRIN3BO60391 AC116655.1-201ENST00000508324 901 ntBASIC4.69□□□□□ -1.66
GRIN3BO60391 AC008716.1-201ENST00000511084 513 ntBASIC4.69□□□□□ -1.66
GRIN3BO60391 AP005902.1-201ENST00000521358 186 ntBASIC4.69□□□□□ -1.66
GRIN3BO60391 AC022695.1-201ENST00000522089 237 ntBASIC4.69□□□□□ -1.66
GRIN3BO60391 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC4.69□□□□□ -1.66
GRIN3BO60391 AC022968.1-201ENST00000567372 442 ntBASIC4.69□□□□□ -1.66
GRIN3BO60391 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC4.69□□□□□ -1.66
GRIN3BO60391 MIR7851-201ENST00000610611 160 ntBASIC4.69□□□□□ -1.66
GRIN3BO60391 AL031601.2-202ENST00000622650 282 ntBASIC4.69□□□□□ -1.66
GRIN3BO60391 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC4.69□□□□□ -1.66
GRIN3BO60391 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
GRIN3BO60391 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
GRIN3BO60391 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
GRIN3BO60391 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC4.69□□□□□ -1.66
GRIN3BO60391 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
GRIN3BO60391 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
GRIN3BO60391 AC004925.1-201ENST00000624256 2706 ntBASIC4.68□□□□□ -1.66
GRIN3BO60391 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.68□□□□□ -1.66
GRIN3BO60391 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
GRIN3BO60391 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
GRIN3BO60391 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.68□□□□□ -1.66
GRIN3BO60391 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
GRIN3BO60391 AC138393.1-203ENST00000327086 343 ntBASIC4.68□□□□□ -1.66
GRIN3BO60391 RNU5A-1-201ENST00000362698 116 ntBASIC4.68□□□□□ -1.66
GRIN3BO60391 SNORA80A-201ENST00000363922 136 ntBASIC4.68□□□□□ -1.66
GRIN3BO60391 DEFB109C-201ENST00000382575 264 ntBASIC4.68□□□□□ -1.66
GRIN3BO60391 DEFB109B-201ENST00000382656 264 ntBASIC4.68□□□□□ -1.66
GRIN3BO60391 RNU6-209P-201ENST00000384118 107 ntBASIC4.68□□□□□ -1.66
GRIN3BO60391 Y_RNA.473-201ENST00000384333 102 ntBASIC4.68□□□□□ -1.66
GRIN3BO60391 Y_RNA.476-201ENST00000384347 108 ntBASIC4.68□□□□□ -1.66
GRIN3BO60391 Y_RNA.496-201ENST00000384444 101 ntBASIC4.68□□□□□ -1.66
GRIN3BO60391 RNU6-306P-201ENST00000384617 107 ntBASIC4.68□□□□□ -1.66
GRIN3BO60391 SNORA41-201ENST00000384675 132 ntBASIC4.68□□□□□ -1.66
GRIN3BO60391 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.68□□□□□ -1.66
GRIN3BO60391 AC063979.1-201ENST00000415539 377 ntBASIC4.68□□□□□ -1.66
GRIN3BO60391 AL353621.1-201ENST00000418219 243 ntBASIC4.68□□□□□ -1.66
GRIN3BO60391 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC4.68□□□□□ -1.66
GRIN3BO60391 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC4.68□□□□□ -1.66
GRIN3BO60391 RBMY2UP-201ENST00000453474 324 ntBASIC4.68□□□□□ -1.66
GRIN3BO60391 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC4.68□□□□□ -1.66
GRIN3BO60391 MTND3P25-201ENST00000509243 135 ntBASIC4.68□□□□□ -1.66
GRIN3BO60391 RNU6-699P-201ENST00000517081 110 ntBASIC4.68□□□□□ -1.66
GRIN3BO60391 AP004371.1-201ENST00000525240 214 ntBASIC4.68□□□□□ -1.66
GRIN3BO60391 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.68□□□□□ -1.66
GRIN3BO60391 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC4.68□□□□□ -1.66
GRIN3BO60391 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.68□□□□□ -1.66
GRIN3BO60391 MIR3945-201ENST00000581853 98 ntBASIC4.68□□□□□ -1.66
GRIN3BO60391 AL451007.1-201ENST00000595491 289 ntBASIC4.68□□□□□ -1.66
GRIN3BO60391 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
GRIN3BO60391 MIR7154-201ENST00000620673 73 ntBASIC4.68□□□□□ -1.66
GRIN3BO60391 AL732372.2-225ENST00000642124 456 ntBASIC4.68□□□□□ -1.66
GRIN3BO60391 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
GRIN3BO60391 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC4.68□□□□□ -1.66
GRIN3BO60391 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.68□□□□□ -1.66
GRIN3BO60391 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
GRIN3BO60391 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.68□□□□□ -1.66
GRIN3BO60391 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
GRIN3BO60391 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
GRIN3BO60391 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.67□□□□□ -1.66
GRIN3BO60391 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC4.67□□□□□ -1.66
GRIN3BO60391 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
GRIN3BO60391 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC4.67□□□□□ -1.66
GRIN3BO60391 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
GRIN3BO60391 UBE2L2-201ENST00000254302 429 ntBASIC4.67□□□□□ -1.66
GRIN3BO60391 RNU6-702P-201ENST00000364982 107 ntBASIC4.67□□□□□ -1.66
GRIN3BO60391 RPL12P25-201ENST00000455592 494 ntBASIC4.67□□□□□ -1.66
GRIN3BO60391 AC128713.1-201ENST00000471495 306 ntBASIC4.67□□□□□ -1.66
GRIN3BO60391 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC4.67□□□□□ -1.66
GRIN3BO60391 AC108860.1-201ENST00000484521 383 ntBASIC4.67□□□□□ -1.66
GRIN3BO60391 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC4.67□□□□□ -1.66
GRIN3BO60391 Y_RNA.661-201ENST00000516003 99 ntBASIC4.67□□□□□ -1.66
GRIN3BO60391 GNAI2P1-201ENST00000541815 315 ntBASIC4.67□□□□□ -1.66
GRIN3BO60391 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.67□□□□□ -1.66
GRIN3BO60391 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC4.67□□□□□ -1.66
GRIN3BO60391 FAM60BP-201ENST00000578364 658 ntBASIC4.67□□□□□ -1.66
GRIN3BO60391 AC006077.1-201ENST00000604746 343 ntBASIC4.67□□□□□ -1.66
GRIN3BO60391 ELOCP5-201ENST00000604924 333 ntBASIC4.67□□□□□ -1.66
GRIN3BO60391 AC006157.1-201ENST00000611750 366 ntBASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms