Protein–RNA interactions for Protein: O15516

CLOCK, Circadian locomoter output cycles protein kaput, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCKO15516 AC116655.1-201ENST00000508324 901 ntBASIC2.01□□□□□ -2.09
CLOCKO15516 RNA5SP200-201ENST00000516360 103 ntBASIC2.01□□□□□ -2.09
CLOCKO15516 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC2.01□□□□□ -2.09
CLOCKO15516 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.01□□□□□ -2.09
CLOCKO15516 AL356432.3-201ENST00000568952 465 ntBASIC2.01□□□□□ -2.09
CLOCKO15516 MIR4782-201ENST00000577987 79 ntBASIC2.01□□□□□ -2.09
CLOCKO15516 MIR3935-201ENST00000583472 104 ntBASIC2.01□□□□□ -2.09
CLOCKO15516 AL670379.6-201ENST00000603753 252 ntBASIC2.01□□□□□ -2.09
CLOCKO15516 AL670379.11-201ENST00000604059 253 ntBASIC2.01□□□□□ -2.09
CLOCKO15516 AC104763.2-201ENST00000604179 382 ntBASIC2.01□□□□□ -2.09
CLOCKO15516 AC008162.1-201ENST00000604718 254 ntBASIC2.01□□□□□ -2.09
CLOCKO15516 AC007363.1-201ENST00000604736 620 ntBASIC2.01□□□□□ -2.09
CLOCKO15516 AL670379.1-201ENST00000604752 252 ntBASIC2.01□□□□□ -2.09
CLOCKO15516 AL670379.5-201ENST00000605253 252 ntBASIC2.01□□□□□ -2.09
CLOCKO15516 AL670379.12-201ENST00000605291 253 ntBASIC2.01□□□□□ -2.09
CLOCKO15516 AL670379.8-201ENST00000605353 252 ntBASIC2.01□□□□□ -2.09
CLOCKO15516 AL670379.7-201ENST00000605823 252 ntBASIC2.01□□□□□ -2.09
CLOCKO15516 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC2.01□□□□□ -2.09
CLOCKO15516 AC009233.1-201ENST00000616477 371 ntBASIC2.01□□□□□ -2.09
CLOCKO15516 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2□□□□□ -2.09
CLOCKO15516 ZNF29P-201ENST00000225587 168 ntBASIC2□□□□□ -2.09
CLOCKO15516 RNU6-1280P-201ENST00000365211 107 ntBASIC2□□□□□ -2.09
CLOCKO15516 MIR221-201ENST00000385135 110 ntBASIC2□□□□□ -2.09
CLOCKO15516 RNU2-63P-201ENST00000410792 194 ntBASIC2□□□□□ -2.09
CLOCKO15516 ELOCP17-201ENST00000414751 326 ntBASIC2□□□□□ -2.09
CLOCKO15516 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC2□□□□□ -2.09
CLOCKO15516 FTH1P25-201ENST00000447665 469 ntBASIC2□□□□□ -2.09
CLOCKO15516 PSPHP1-201ENST00000450062 261 ntBASIC2□□□□□ -2.09
CLOCKO15516 AL118520.1-201ENST00000450770 291 ntBASIC2□□□□□ -2.09
CLOCKO15516 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC2□□□□□ -2.09
CLOCKO15516 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC2□□□□□ -2.09
CLOCKO15516 AC018437.1-201ENST00000492214 406 ntBASIC2□□□□□ -2.09
CLOCKO15516 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC2□□□□□ -2.09
CLOCKO15516 UBE2V1P12-201ENST00000503954 474 ntBASIC2□□□□□ -2.09
CLOCKO15516 AKIRIN2P1-201ENST00000505898 352 ntBASIC2□□□□□ -2.09
CLOCKO15516 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC2□□□□□ -2.09
CLOCKO15516 SMURF2P1-201ENST00000514992 481 ntBASIC2□□□□□ -2.09
CLOCKO15516 ACA59.2-201ENST00000517061 156 ntBASIC2□□□□□ -2.09
CLOCKO15516 AC009902.1-201ENST00000519351 183 ntBASIC2□□□□□ -2.09
CLOCKO15516 AC084851.1-201ENST00000529105 249 ntBASIC2□□□□□ -2.09
CLOCKO15516 AC118273.2-201ENST00000532092 465 ntBASIC2□□□□□ -2.09
CLOCKO15516 DUXAP1-201ENST00000556632 463 ntBASIC2□□□□□ -2.09
CLOCKO15516 LINC00933-203ENST00000559812 219 ntBASIC2□□□□□ -2.09
CLOCKO15516 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC2□□□□□ -2.09
CLOCKO15516 AC012213.3-201ENST00000577199 777 ntBASIC2□□□□□ -2.09
CLOCKO15516 MIR4648-201ENST00000580107 72 ntBASIC2□□□□□ -2.09
CLOCKO15516 AC025165.5-201ENST00000602802 578 ntBASIC2□□□□□ -2.09
CLOCKO15516 AC107214.2-201ENST00000608204 634 ntBASIC2□□□□□ -2.09
CLOCKO15516 AL359757.2-201ENST00000624309 274 ntBASIC2□□□□□ -2.09
CLOCKO15516 AC103706.2-201ENST00000638080 240 ntBASIC2□□□□□ -2.09
CLOCKO15516 AL354685.2-201ENST00000448218 1447 ntBASIC2□□□□□ -2.09
CLOCKO15516 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
CLOCKO15516 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
CLOCKO15516 RNU6-288P-201ENST00000363690 104 ntBASIC1.99□□□□□ -2.09
CLOCKO15516 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
CLOCKO15516 RNU2-62P-201ENST00000410868 191 ntBASIC1.99□□□□□ -2.09
CLOCKO15516 RNA5SP270-201ENST00000411361 118 ntBASIC1.99□□□□□ -2.09
CLOCKO15516 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC1.99□□□□□ -2.09
CLOCKO15516 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.99□□□□□ -2.09
CLOCKO15516 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC1.99□□□□□ -2.09
CLOCKO15516 RPS15AP9-201ENST00000439856 381 ntBASIC1.99□□□□□ -2.09
CLOCKO15516 RPL7P12-201ENST00000446719 750 ntBASIC1.99□□□□□ -2.09
CLOCKO15516 RNA5SP233-201ENST00000459153 113 ntBASIC1.99□□□□□ -2.09
CLOCKO15516 SNORD97-201ENST00000459187 142 ntBASIC1.99□□□□□ -2.09
CLOCKO15516 AC092436.1-201ENST00000506450 503 ntBASIC1.99□□□□□ -2.09
CLOCKO15516 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC1.99□□□□□ -2.09
CLOCKO15516 MTATP6P15-201ENST00000527233 835 ntBASIC1.99□□□□□ -2.09
CLOCKO15516 AC023050.2-201ENST00000544968 387 ntBASIC1.99□□□□□ -2.09
CLOCKO15516 ANP32BP3-201ENST00000559213 706 ntBASIC1.99□□□□□ -2.09
CLOCKO15516 MIR1273D-201ENST00000577266 86 ntBASIC1.99□□□□□ -2.09
CLOCKO15516 MIR3146-201ENST00000580367 79 ntBASIC1.99□□□□□ -2.09
CLOCKO15516 MIR4307-201ENST00000582802 84 ntBASIC1.99□□□□□ -2.09
CLOCKO15516 AC009314.1-201ENST00000603871 304 ntBASIC1.99□□□□□ -2.09
CLOCKO15516 AC034229.4-201ENST00000607861 441 ntBASIC1.99□□□□□ -2.09
CLOCKO15516 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC1.99□□□□□ -2.09
CLOCKO15516 MIR5739-201ENST00000619803 80 ntBASIC1.99□□□□□ -2.09
CLOCKO15516 MIR6132-201ENST00000622083 109 ntBASIC1.99□□□□□ -2.09
CLOCKO15516 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC1.99□□□□□ -2.09
CLOCKO15516 AC138627.2-201ENST00000624202 601 ntBASIC1.99□□□□□ -2.09
CLOCKO15516 AC010608.3-201ENST00000625048 527 ntBASIC1.99□□□□□ -2.09
CLOCKO15516 Z99571.1-201ENST00000636677 394 ntBASIC1.99□□□□□ -2.09
CLOCKO15516 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
CLOCKO15516 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC1.98□□□□□ -2.09
CLOCKO15516 RNU6-83P-201ENST00000384568 112 ntBASIC1.98□□□□□ -2.09
CLOCKO15516 MIR17-201ENST00000385012 84 ntBASIC1.98□□□□□ -2.09
CLOCKO15516 MIR301A-201ENST00000385261 86 ntBASIC1.98□□□□□ -2.09
CLOCKO15516 MIR1302-8-201ENST00000408342 128 ntBASIC1.98□□□□□ -2.09
CLOCKO15516 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC1.98□□□□□ -2.09
CLOCKO15516 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC1.98□□□□□ -2.09
CLOCKO15516 AL353621.1-201ENST00000418219 243 ntBASIC1.98□□□□□ -2.09
CLOCKO15516 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC1.98□□□□□ -2.09
CLOCKO15516 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC1.98□□□□□ -2.09
CLOCKO15516 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC1.98□□□□□ -2.09
CLOCKO15516 RPL7P34-201ENST00000433316 712 ntBASIC1.98□□□□□ -2.09
CLOCKO15516 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC1.98□□□□□ -2.09
CLOCKO15516 AC096638.1-201ENST00000444678 216 ntBASIC1.98□□□□□ -2.09
CLOCKO15516 FDX1P2-201ENST00000450769 375 ntBASIC1.98□□□□□ -2.09
CLOCKO15516 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC1.98□□□□□ -2.09
CLOCKO15516 AC023194.1-201ENST00000493084 308 ntBASIC1.98□□□□□ -2.09
CLOCKO15516 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC1.98□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 116.4 ms