Protein–RNA interactions for Protein: A6NM62

LRRC53, Leucine-rich repeat-containing protein 53, humanhuman

Predictions only

Length 1,247 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC53A6NM62 MIR4444-2-201ENST00000584390 74 ntBASIC3.1□□□□□ -1.91
LRRC53A6NM62 AC008739.3-201ENST00000603262 127 ntBASIC3.1□□□□□ -1.91
LRRC53A6NM62 AC012468.1-201ENST00000604888 430 ntBASIC3.1□□□□□ -1.91
LRRC53A6NM62 U4.5-201ENST00000617137 123 ntBASIC3.1□□□□□ -1.91
LRRC53A6NM62 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
LRRC53A6NM62 uc_338.11-201ENST00000619132 160 ntBASIC3.1□□□□□ -1.91
LRRC53A6NM62 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.1□□□□□ -1.91
LRRC53A6NM62 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.1□□□□□ -1.91
LRRC53A6NM62 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.1□□□□□ -1.91
LRRC53A6NM62 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.1□□□□□ -1.91
LRRC53A6NM62 AL354685.2-201ENST00000448218 1447 ntBASIC3.1□□□□□ -1.91
LRRC53A6NM62 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
LRRC53A6NM62 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
LRRC53A6NM62 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.09□□□□□ -1.91
LRRC53A6NM62 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.09□□□□□ -1.91
LRRC53A6NM62 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.09□□□□□ -1.91
LRRC53A6NM62 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.09□□□□□ -1.91
LRRC53A6NM62 NACAP2-201ENST00000318548 624 ntBASIC3.09□□□□□ -1.91
LRRC53A6NM62 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
LRRC53A6NM62 RNU6-371P-201ENST00000364283 108 ntBASIC3.09□□□□□ -1.91
LRRC53A6NM62 RNA5SP72-201ENST00000364442 117 ntBASIC3.09□□□□□ -1.91
LRRC53A6NM62 MDM4-202ENST00000367180 547 ntTSL 3 BASIC3.09□□□□□ -1.91
LRRC53A6NM62 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC3.09□□□□□ -1.91
LRRC53A6NM62 MIR578-201ENST00000384828 96 ntBASIC3.09□□□□□ -1.91
LRRC53A6NM62 MIR7-3-201ENST00000384898 110 ntBASIC3.09□□□□□ -1.91
LRRC53A6NM62 RNU4-46P-201ENST00000410818 138 ntBASIC3.09□□□□□ -1.91
LRRC53A6NM62 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.09□□□□□ -1.91
LRRC53A6NM62 MYL8P-204ENST00000431574 518 ntBASIC3.09□□□□□ -1.91
LRRC53A6NM62 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.09□□□□□ -1.91
LRRC53A6NM62 VN1R34P-201ENST00000447387 883 ntBASIC3.09□□□□□ -1.91
LRRC53A6NM62 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC3.09□□□□□ -1.91
LRRC53A6NM62 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.09□□□□□ -1.91
LRRC53A6NM62 RPL27AP5-201ENST00000469428 449 ntBASIC3.09□□□□□ -1.91
LRRC53A6NM62 RPS27AP10-201ENST00000496103 208 ntBASIC3.09□□□□□ -1.91
LRRC53A6NM62 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.09□□□□□ -1.91
LRRC53A6NM62 RNU6-835P-201ENST00000516974 104 ntBASIC3.09□□□□□ -1.91
LRRC53A6NM62 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC3.09□□□□□ -1.91
LRRC53A6NM62 PSMA2P1-201ENST00000526365 646 ntBASIC3.09□□□□□ -1.91
LRRC53A6NM62 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.09□□□□□ -1.91
LRRC53A6NM62 OR5AQ1P-201ENST00000527596 927 ntBASIC3.09□□□□□ -1.91
LRRC53A6NM62 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
LRRC53A6NM62 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC3.09□□□□□ -1.91
LRRC53A6NM62 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.09□□□□□ -1.91
LRRC53A6NM62 AL512310.1-201ENST00000548639 172 ntBASIC3.09□□□□□ -1.91
LRRC53A6NM62 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC3.09□□□□□ -1.91
LRRC53A6NM62 HIF1AP1-201ENST00000553642 175 ntBASIC3.09□□□□□ -1.91
LRRC53A6NM62 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC3.09□□□□□ -1.91
LRRC53A6NM62 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC3.09□□□□□ -1.91
LRRC53A6NM62 AC024220.1-201ENST00000603675 484 ntBASIC3.09□□□□□ -1.91
LRRC53A6NM62 AC069234.5-201ENST00000611056 416 ntBASIC3.09□□□□□ -1.91
LRRC53A6NM62 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC3.09□□□□□ -1.91
LRRC53A6NM62 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
LRRC53A6NM62 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
LRRC53A6NM62 RNU4-12P-201ENST00000365233 139 ntBASIC3.08□□□□□ -1.92
LRRC53A6NM62 RNU6-395P-201ENST00000365662 106 ntBASIC3.08□□□□□ -1.92
LRRC53A6NM62 RNU6-1027P-201ENST00000383998 107 ntBASIC3.08□□□□□ -1.92
LRRC53A6NM62 RNU6-658P-201ENST00000384606 106 ntBASIC3.08□□□□□ -1.92
LRRC53A6NM62 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.08□□□□□ -1.92
LRRC53A6NM62 SNORD88.1-201ENST00000408684 91 ntBASIC3.08□□□□□ -1.92
LRRC53A6NM62 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC3.08□□□□□ -1.92
LRRC53A6NM62 RPL21P90-201ENST00000415692 466 ntBASIC3.08□□□□□ -1.92
LRRC53A6NM62 AL353729.1-201ENST00000425044 720 ntBASIC3.08□□□□□ -1.92
LRRC53A6NM62 AC093151.1-201ENST00000427711 313 ntBASIC3.08□□□□□ -1.92
LRRC53A6NM62 BRK1P2-201ENST00000442875 223 ntBASIC3.08□□□□□ -1.92
LRRC53A6NM62 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC3.08□□□□□ -1.92
LRRC53A6NM62 RNU7-23P-201ENST00000459465 62 ntBASIC3.08□□□□□ -1.92
LRRC53A6NM62 RNU6-261P-201ENST00000459506 102 ntBASIC3.08□□□□□ -1.92
LRRC53A6NM62 AC003982.1-202ENST00000469928 248 ntBASIC3.08□□□□□ -1.92
LRRC53A6NM62 RN7SL807P-201ENST00000470923 297 ntBASIC3.08□□□□□ -1.92
LRRC53A6NM62 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC3.08□□□□□ -1.92
LRRC53A6NM62 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.08□□□□□ -1.92
LRRC53A6NM62 AC011352.1-201ENST00000512300 793 ntBASIC3.08□□□□□ -1.92
LRRC53A6NM62 RNA5SP401-201ENST00000515920 127 ntBASIC3.08□□□□□ -1.92
LRRC53A6NM62 RNU6-1281P-201ENST00000516223 105 ntBASIC3.08□□□□□ -1.92
LRRC53A6NM62 RNU6-572P-201ENST00000516724 80 ntBASIC3.08□□□□□ -1.92
LRRC53A6NM62 SNORA31.19-201ENST00000517079 126 ntBASIC3.08□□□□□ -1.92
LRRC53A6NM62 SNORA31.21-201ENST00000517180 77 ntBASIC3.08□□□□□ -1.92
LRRC53A6NM62 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC3.08□□□□□ -1.92
LRRC53A6NM62 AC136619.2-201ENST00000563361 631 ntBASIC3.08□□□□□ -1.92
LRRC53A6NM62 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC3.08□□□□□ -1.92
LRRC53A6NM62 MIR548AC-201ENST00000585049 88 ntBASIC3.08□□□□□ -1.92
LRRC53A6NM62 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC3.08□□□□□ -1.92
LRRC53A6NM62 NUTF2P8-201ENST00000604593 363 ntBASIC3.08□□□□□ -1.92
LRRC53A6NM62 YPEL5P2-201ENST00000605553 359 ntBASIC3.08□□□□□ -1.92
LRRC53A6NM62 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC3.08□□□□□ -1.92
LRRC53A6NM62 AC004832.5-201ENST00000608677 401 ntBASIC3.08□□□□□ -1.92
LRRC53A6NM62 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.08□□□□□ -1.92
LRRC53A6NM62 U6.99-201ENST00000637524 83 ntBASIC3.08□□□□□ -1.92
LRRC53A6NM62 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
LRRC53A6NM62 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.07□□□□□ -1.92
LRRC53A6NM62 SNORD3E-201ENST00000362899 217 ntBASIC3.07□□□□□ -1.92
LRRC53A6NM62 RNA5SP374-201ENST00000362939 125 ntBASIC3.07□□□□□ -1.92
LRRC53A6NM62 CD24P4-201ENST00000382840 243 ntBASIC3.07□□□□□ -1.92
LRRC53A6NM62 MIR670-201ENST00000390142 98 ntBASIC3.07□□□□□ -1.92
LRRC53A6NM62 RPL26P27-201ENST00000414397 437 ntBASIC3.07□□□□□ -1.92
LRRC53A6NM62 AC098614.2-201ENST00000426040 255 ntBASIC3.07□□□□□ -1.92
LRRC53A6NM62 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC3.07□□□□□ -1.92
LRRC53A6NM62 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC3.07□□□□□ -1.92
LRRC53A6NM62 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC3.07□□□□□ -1.92
LRRC53A6NM62 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms