Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.13□□□□□ -1.75
CCDC66A2RUB6 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC4.13□□□□□ -1.75
CCDC66A2RUB6 AL020997.2-201ENST00000602607 184 ntBASIC4.13□□□□□ -1.75
CCDC66A2RUB6 SNORD39.4-201ENST00000620099 78 ntBASIC4.13□□□□□ -1.75
CCDC66A2RUB6 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.13□□□□□ -1.75
CCDC66A2RUB6 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CCDC66A2RUB6 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC4.13□□□□□ -1.75
CCDC66A2RUB6 AF127577.6-201ENST00000623352 2191 ntBASIC4.13□□□□□ -1.75
CCDC66A2RUB6 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CCDC66A2RUB6 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CCDC66A2RUB6 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CCDC66A2RUB6 AC008568.2-201ENST00000623862 2313 ntBASIC4.12□□□□□ -1.75
CCDC66A2RUB6 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC4.12□□□□□ -1.75
CCDC66A2RUB6 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CCDC66A2RUB6 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC4.12□□□□□ -1.75
CCDC66A2RUB6 Y_RNA.112-201ENST00000363250 102 ntBASIC4.12□□□□□ -1.75
CCDC66A2RUB6 SNORA63C-201ENST00000364578 129 ntBASIC4.12□□□□□ -1.75
CCDC66A2RUB6 Y_RNA.324-201ENST00000365165 102 ntBASIC4.12□□□□□ -1.75
CCDC66A2RUB6 RNU6-805P-201ENST00000365643 106 ntBASIC4.12□□□□□ -1.75
CCDC66A2RUB6 RNU6-1329P-201ENST00000365664 107 ntBASIC4.12□□□□□ -1.75
CCDC66A2RUB6 RNU6-1160P-201ENST00000384546 104 ntBASIC4.12□□□□□ -1.75
CCDC66A2RUB6 RPS26P8-201ENST00000393490 348 ntBASIC4.12□□□□□ -1.75
CCDC66A2RUB6 RNU6-1050P-201ENST00000410388 107 ntBASIC4.12□□□□□ -1.75
CCDC66A2RUB6 RNU6-1025P-201ENST00000410629 104 ntBASIC4.12□□□□□ -1.75
CCDC66A2RUB6 RPL17P36-201ENST00000420302 549 ntBASIC4.12□□□□□ -1.75
CCDC66A2RUB6 AC007919.1-201ENST00000429380 217 ntBASIC4.12□□□□□ -1.75
CCDC66A2RUB6 AL137792.2-201ENST00000443484 235 ntBASIC4.12□□□□□ -1.75
CCDC66A2RUB6 AL132838.2-201ENST00000492041 314 ntBASIC4.12□□□□□ -1.75
CCDC66A2RUB6 UBE2CP3-201ENST00000502715 450 ntBASIC4.12□□□□□ -1.75
CCDC66A2RUB6 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC4.12□□□□□ -1.75
CCDC66A2RUB6 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC4.12□□□□□ -1.75
CCDC66A2RUB6 RN7SKP21-201ENST00000516503 220 ntBASIC4.12□□□□□ -1.75
CCDC66A2RUB6 RNA5SP291-201ENST00000517222 105 ntBASIC4.12□□□□□ -1.75
CCDC66A2RUB6 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC4.12□□□□□ -1.75
CCDC66A2RUB6 NDUFB9P3-201ENST00000521269 501 ntBASIC4.12□□□□□ -1.75
CCDC66A2RUB6 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC4.12□□□□□ -1.75
CCDC66A2RUB6 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC4.12□□□□□ -1.75
CCDC66A2RUB6 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC4.12□□□□□ -1.75
CCDC66A2RUB6 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC4.12□□□□□ -1.75
CCDC66A2RUB6 ZNF192P1-203ENST00000565888 810 ntBASIC4.12□□□□□ -1.75
CCDC66A2RUB6 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC4.12□□□□□ -1.75
CCDC66A2RUB6 ELOCP5-201ENST00000604924 333 ntBASIC4.12□□□□□ -1.75
CCDC66A2RUB6 AC016925.2-201ENST00000605108 242 ntBASIC4.12□□□□□ -1.75
CCDC66A2RUB6 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CCDC66A2RUB6 AC009229.3-201ENST00000608056 282 ntBASIC4.12□□□□□ -1.75
CCDC66A2RUB6 AC019193.3-201ENST00000609144 554 ntBASIC4.12□□□□□ -1.75
CCDC66A2RUB6 AL161423.1-201ENST00000613700 262 ntBASIC4.12□□□□□ -1.75
CCDC66A2RUB6 SNORA50A-202ENST00000629536 136 ntBASIC4.12□□□□□ -1.75
CCDC66A2RUB6 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC4.12□□□□□ -1.75
CCDC66A2RUB6 MTND5P27-201ENST00000428871 1720 ntBASIC4.12□□□□□ -1.75
CCDC66A2RUB6 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
CCDC66A2RUB6 SRP72P2-201ENST00000344851 1979 ntBASIC4.11□□□□□ -1.75
CCDC66A2RUB6 EFTUD1P2-201ENST00000514817 1603 ntBASIC4.11□□□□□ -1.75
CCDC66A2RUB6 RNU6-600P-201ENST00000362524 99 ntBASIC4.11□□□□□ -1.75
CCDC66A2RUB6 RNA5SP479-201ENST00000364858 117 ntBASIC4.11□□□□□ -1.75
CCDC66A2RUB6 RNU6-1040P-201ENST00000383974 107 ntBASIC4.11□□□□□ -1.75
CCDC66A2RUB6 SNORA75B-201ENST00000384053 137 ntBASIC4.11□□□□□ -1.75
CCDC66A2RUB6 MIR1193-201ENST00000408109 78 ntBASIC4.11□□□□□ -1.75
CCDC66A2RUB6 Y_RNA.594-201ENST00000410373 140 ntBASIC4.11□□□□□ -1.75
CCDC66A2RUB6 Z99755.1-201ENST00000414048 380 ntBASIC4.11□□□□□ -1.75
CCDC66A2RUB6 PMCHL1-202ENST00000423102 261 ntBASIC4.11□□□□□ -1.75
CCDC66A2RUB6 UBE2D3P2-201ENST00000424409 445 ntBASIC4.11□□□□□ -1.75
CCDC66A2RUB6 AC011005.2-201ENST00000487324 359 ntBASIC4.11□□□□□ -1.75
CCDC66A2RUB6 RNU6-976P-201ENST00000516086 111 ntBASIC4.11□□□□□ -1.75
CCDC66A2RUB6 RNU1-86P-201ENST00000516108 154 ntBASIC4.11□□□□□ -1.75
CCDC66A2RUB6 MIR892C-201ENST00000516410 77 ntBASIC4.11□□□□□ -1.75
CCDC66A2RUB6 RNU1-107P-201ENST00000516617 154 ntBASIC4.11□□□□□ -1.75
CCDC66A2RUB6 AC090877.1-201ENST00000561418 344 ntBASIC4.11□□□□□ -1.75
CCDC66A2RUB6 AC007224.1-201ENST00000564410 144 ntBASIC4.11□□□□□ -1.75
CCDC66A2RUB6 OR1M4P-201ENST00000589199 287 ntBASIC4.11□□□□□ -1.75
CCDC66A2RUB6 AC116312.1-201ENST00000606841 314 ntBASIC4.11□□□□□ -1.75
CCDC66A2RUB6 DLEU2_5.1-201ENST00000615567 84 ntBASIC4.11□□□□□ -1.75
CCDC66A2RUB6 AC048347.1-201ENST00000624621 427 ntBASIC4.11□□□□□ -1.75
CCDC66A2RUB6 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC4.11□□□□□ -1.75
CCDC66A2RUB6 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC4.11□□□□□ -1.75
CCDC66A2RUB6 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
CCDC66A2RUB6 AL513302.2-201ENST00000562313 1842 ntBASIC4.11□□□□□ -1.75
CCDC66A2RUB6 AP001148.1-201ENST00000624124 2359 ntBASIC4.11□□□□□ -1.75
CCDC66A2RUB6 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
CCDC66A2RUB6 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC4.11□□□□□ -1.75
CCDC66A2RUB6 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CCDC66A2RUB6 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CCDC66A2RUB6 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CCDC66A2RUB6 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CCDC66A2RUB6 Y_RNA.31-201ENST00000362574 102 ntBASIC4.1□□□□□ -1.75
CCDC66A2RUB6 SNORA22B-201ENST00000383876 138 ntBASIC4.1□□□□□ -1.75
CCDC66A2RUB6 RNU6-306P-201ENST00000384617 107 ntBASIC4.1□□□□□ -1.75
CCDC66A2RUB6 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC4.1□□□□□ -1.75
CCDC66A2RUB6 MYL8P-204ENST00000431574 518 ntBASIC4.1□□□□□ -1.75
CCDC66A2RUB6 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC4.1□□□□□ -1.75
CCDC66A2RUB6 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC4.1□□□□□ -1.75
CCDC66A2RUB6 MIR2053-201ENST00000459295 91 ntBASIC4.1□□□□□ -1.75
CCDC66A2RUB6 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC4.1□□□□□ -1.75
CCDC66A2RUB6 Y_RNA.670-201ENST00000516255 105 ntBASIC4.1□□□□□ -1.75
CCDC66A2RUB6 MIR2116-201ENST00000517221 80 ntBASIC4.1□□□□□ -1.75
CCDC66A2RUB6 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.1□□□□□ -1.75
CCDC66A2RUB6 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC4.1□□□□□ -1.75
CCDC66A2RUB6 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC4.1□□□□□ -1.75
CCDC66A2RUB6 AC011602.1-201ENST00000546484 331 ntBASIC4.1□□□□□ -1.75
CCDC66A2RUB6 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms