Protein–RNA interactions for Protein: A0A0B4J280

TRAV40, T-cell receptor alpha variable 40 (Fragment), humanhuman

Predictions only

Length 105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40A0A0B4J280 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC1.82□□□□□ -2.12
TRAV40A0A0B4J280 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
TRAV40A0A0B4J280 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
TRAV40A0A0B4J280 AL355596.1-201ENST00000565399 3996 ntBASIC1.81□□□□□ -2.12
TRAV40A0A0B4J280 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC1.81□□□□□ -2.12
TRAV40A0A0B4J280 RNA5SP393-201ENST00000363423 117 ntBASIC1.81□□□□□ -2.12
TRAV40A0A0B4J280 SNORA4.3-201ENST00000365564 137 ntBASIC1.81□□□□□ -2.12
TRAV40A0A0B4J280 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC1.81□□□□□ -2.12
TRAV40A0A0B4J280 RNU6-946P-201ENST00000383878 107 ntBASIC1.81□□□□□ -2.12
TRAV40A0A0B4J280 RNU6-741P-201ENST00000383889 107 ntBASIC1.81□□□□□ -2.12
TRAV40A0A0B4J280 RNU5A-2P-201ENST00000384337 116 ntBASIC1.81□□□□□ -2.12
TRAV40A0A0B4J280 Y_RNA.553-201ENST00000384670 102 ntBASIC1.81□□□□□ -2.12
TRAV40A0A0B4J280 MIR144-201ENST00000384886 86 ntBASIC1.81□□□□□ -2.12
TRAV40A0A0B4J280 RPL23AP32-201ENST00000395315 459 ntBASIC1.81□□□□□ -2.12
TRAV40A0A0B4J280 MIR1290-201ENST00000408735 78 ntBASIC1.81□□□□□ -2.12
TRAV40A0A0B4J280 RNU4-26P-201ENST00000410270 107 ntBASIC1.81□□□□□ -2.12
TRAV40A0A0B4J280 AC127391.1-201ENST00000411737 98 ntBASIC1.81□□□□□ -2.12
TRAV40A0A0B4J280 AF274854.1-201ENST00000413236 615 ntBASIC1.81□□□□□ -2.12
TRAV40A0A0B4J280 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC1.81□□□□□ -2.12
TRAV40A0A0B4J280 AC016907.1-201ENST00000419483 435 ntBASIC1.81□□□□□ -2.12
TRAV40A0A0B4J280 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
TRAV40A0A0B4J280 BX276092.3-201ENST00000424182 230 ntBASIC1.81□□□□□ -2.12
TRAV40A0A0B4J280 ELOCP14-201ENST00000428070 331 ntBASIC1.81□□□□□ -2.12
TRAV40A0A0B4J280 CALM2P2-201ENST00000428512 440 ntBASIC1.81□□□□□ -2.12
TRAV40A0A0B4J280 ELOCP7-201ENST00000439968 331 ntBASIC1.81□□□□□ -2.12
TRAV40A0A0B4J280 USP9YP15-201ENST00000442391 422 ntBASIC1.81□□□□□ -2.12
TRAV40A0A0B4J280 AC244505.5-201ENST00000443639 207 ntBASIC1.81□□□□□ -2.12
TRAV40A0A0B4J280 MTND1P12-201ENST00000455231 147 ntBASIC1.81□□□□□ -2.12
TRAV40A0A0B4J280 AC013267.1-201ENST00000458227 267 ntBASIC1.81□□□□□ -2.12
TRAV40A0A0B4J280 SNORD42A-201ENST00000459584 64 ntBASIC1.81□□□□□ -2.12
TRAV40A0A0B4J280 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC1.81□□□□□ -2.12
TRAV40A0A0B4J280 AC138853.1-201ENST00000503549 823 ntBASIC1.81□□□□□ -2.12
TRAV40A0A0B4J280 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC1.81□□□□□ -2.12
TRAV40A0A0B4J280 AC010424.1-201ENST00000506336 297 ntBASIC1.81□□□□□ -2.12
TRAV40A0A0B4J280 SNORA18.6-201ENST00000516792 115 ntBASIC1.81□□□□□ -2.12
TRAV40A0A0B4J280 RNA5SP290-201ENST00000517133 127 ntBASIC1.81□□□□□ -2.12
TRAV40A0A0B4J280 RNA5SP165-201ENST00000517142 115 ntBASIC1.81□□□□□ -2.12
TRAV40A0A0B4J280 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC1.81□□□□□ -2.12
TRAV40A0A0B4J280 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC1.81□□□□□ -2.12
TRAV40A0A0B4J280 RANP3-201ENST00000530970 276 ntBASIC1.81□□□□□ -2.12
TRAV40A0A0B4J280 AP000873.5-201ENST00000533906 236 ntBASIC1.81□□□□□ -2.12
TRAV40A0A0B4J280 AC087241.2-201ENST00000535801 324 ntBASIC1.81□□□□□ -2.12
TRAV40A0A0B4J280 SNRPGP18-201ENST00000553000 214 ntBASIC1.81□□□□□ -2.12
TRAV40A0A0B4J280 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC1.81□□□□□ -2.12
TRAV40A0A0B4J280 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC1.81□□□□□ -2.12
TRAV40A0A0B4J280 MIR4528-201ENST00000577763 90 ntBASIC1.81□□□□□ -2.12
TRAV40A0A0B4J280 AC024619.4-201ENST00000580924 316 ntBASIC1.81□□□□□ -2.12
TRAV40A0A0B4J280 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC1.81□□□□□ -2.12
TRAV40A0A0B4J280 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC1.81□□□□□ -2.12
TRAV40A0A0B4J280 AL645944.1-201ENST00000603857 493 ntBASIC1.81□□□□□ -2.12
TRAV40A0A0B4J280 AC090578.1-201ENST00000604955 591 ntBASIC1.81□□□□□ -2.12
TRAV40A0A0B4J280 AP002360.4-201ENST00000606980 481 ntBASIC1.81□□□□□ -2.12
TRAV40A0A0B4J280 AC006566.1-201ENST00000608943 513 ntBASIC1.81□□□□□ -2.12
TRAV40A0A0B4J280 AC103710.1-201ENST00000610003 901 ntBASIC1.81□□□□□ -2.12
TRAV40A0A0B4J280 AC093783.1-201ENST00000612976 329 ntBASIC1.81□□□□□ -2.12
TRAV40A0A0B4J280 AC011890.2-201ENST00000613393 294 ntBASIC1.81□□□□□ -2.12
TRAV40A0A0B4J280 UBE2Q2P2-203ENST00000613592 761 ntBASIC1.81□□□□□ -2.12
TRAV40A0A0B4J280 AC010678.1-201ENST00000614118 713 ntBASIC1.81□□□□□ -2.12
TRAV40A0A0B4J280 AL133173.2-201ENST00000614270 90 ntBASIC1.81□□□□□ -2.12
TRAV40A0A0B4J280 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC1.81□□□□□ -2.12
TRAV40A0A0B4J280 AC009509.4-201ENST00000619202 509 ntBASIC1.81□□□□□ -2.12
TRAV40A0A0B4J280 AC136475.10-201ENST00000620253 385 ntBASIC1.81□□□□□ -2.12
TRAV40A0A0B4J280 AC073308.1-201ENST00000623696 305 ntBASIC1.81□□□□□ -2.12
TRAV40A0A0B4J280 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.81□□□□□ -2.12
TRAV40A0A0B4J280 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC1.81□□□□□ -2.12
TRAV40A0A0B4J280 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC1.81□□□□□ -2.12
TRAV40A0A0B4J280 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC1.81□□□□□ -2.12
TRAV40A0A0B4J280 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC1.81□□□□□ -2.12
TRAV40A0A0B4J280 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC1.81□□□□□ -2.12
TRAV40A0A0B4J280 TPTE2P4-201ENST00000258589 1605 ntBASIC1.8□□□□□ -2.12
TRAV40A0A0B4J280 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
TRAV40A0A0B4J280 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC1.8□□□□□ -2.12
TRAV40A0A0B4J280 Y_RNA.51-201ENST00000362725 102 ntBASIC1.8□□□□□ -2.12
TRAV40A0A0B4J280 Y_RNA.201-201ENST00000364052 96 ntBASIC1.8□□□□□ -2.12
TRAV40A0A0B4J280 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC1.8□□□□□ -2.12
TRAV40A0A0B4J280 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
TRAV40A0A0B4J280 DEFB108C-201ENST00000400154 252 ntBASIC1.8□□□□□ -2.12
TRAV40A0A0B4J280 U3.37-201ENST00000408528 213 ntBASIC1.8□□□□□ -2.12
TRAV40A0A0B4J280 RN7SKP32-201ENST00000410167 303 ntBASIC1.8□□□□□ -2.12
TRAV40A0A0B4J280 ATG3P1-201ENST00000419507 911 ntBASIC1.8□□□□□ -2.12
TRAV40A0A0B4J280 ELOCP4-201ENST00000420090 333 ntBASIC1.8□□□□□ -2.12
TRAV40A0A0B4J280 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC1.8□□□□□ -2.12
TRAV40A0A0B4J280 RAC1P6-201ENST00000423911 575 ntBASIC1.8□□□□□ -2.12
TRAV40A0A0B4J280 AL365496.1-201ENST00000426885 215 ntBASIC1.8□□□□□ -2.12
TRAV40A0A0B4J280 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC1.8□□□□□ -2.12
TRAV40A0A0B4J280 GTF2IP20-201ENST00000431663 360 ntBASIC1.8□□□□□ -2.12
TRAV40A0A0B4J280 AL358934.1-201ENST00000432346 324 ntBASIC1.8□□□□□ -2.12
TRAV40A0A0B4J280 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC1.8□□□□□ -2.12
TRAV40A0A0B4J280 AC119618.1-201ENST00000434191 222 ntBASIC1.8□□□□□ -2.12
TRAV40A0A0B4J280 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC1.8□□□□□ -2.12
TRAV40A0A0B4J280 AC018634.1-201ENST00000437554 401 ntBASIC1.8□□□□□ -2.12
TRAV40A0A0B4J280 MTATP6P26-201ENST00000445926 662 ntBASIC1.8□□□□□ -2.12
TRAV40A0A0B4J280 FTH1P25-201ENST00000447665 469 ntBASIC1.8□□□□□ -2.12
TRAV40A0A0B4J280 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC1.8□□□□□ -2.12
TRAV40A0A0B4J280 AC079448.1-201ENST00000449377 373 ntBASIC1.8□□□□□ -2.12
TRAV40A0A0B4J280 FABP5P15-201ENST00000453566 214 ntBASIC1.8□□□□□ -2.12
TRAV40A0A0B4J280 AL033528.1-201ENST00000453780 140 ntBASIC1.8□□□□□ -2.12
TRAV40A0A0B4J280 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC1.8□□□□□ -2.12
TRAV40A0A0B4J280 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC1.8□□□□□ -2.12
TRAV40A0A0B4J280 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC1.8□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 121.1 ms