Protein–RNA interactions for Protein: A0A0B4J266

TRAV41, T-cell receptor alpha variable 41 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV41A0A0B4J266 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC1.32□□□□□ -2.2
TRAV41A0A0B4J266 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.32□□□□□ -2.2
TRAV41A0A0B4J266 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC1.32□□□□□ -2.2
TRAV41A0A0B4J266 AL591806.2-201ENST00000433122 173 ntBASIC1.32□□□□□ -2.2
TRAV41A0A0B4J266 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC1.32□□□□□ -2.2
TRAV41A0A0B4J266 OR6C5P-201ENST00000452388 923 ntBASIC1.32□□□□□ -2.2
TRAV41A0A0B4J266 PPP1R2P5-201ENST00000457256 603 ntBASIC1.32□□□□□ -2.2
TRAV41A0A0B4J266 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC1.32□□□□□ -2.2
TRAV41A0A0B4J266 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC1.32□□□□□ -2.2
TRAV41A0A0B4J266 AC093809.1-201ENST00000509155 340 ntBASIC1.32□□□□□ -2.2
TRAV41A0A0B4J266 SNORA19.3-201ENST00000516165 130 ntBASIC1.32□□□□□ -2.2
TRAV41A0A0B4J266 RNU6-581P-201ENST00000516214 105 ntBASIC1.32□□□□□ -2.2
TRAV41A0A0B4J266 RN7SKP258-201ENST00000517151 304 ntBASIC1.32□□□□□ -2.2
TRAV41A0A0B4J266 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC1.32□□□□□ -2.2
TRAV41A0A0B4J266 CBX3P4-201ENST00000538909 354 ntBASIC1.32□□□□□ -2.2
TRAV41A0A0B4J266 HSBP1P1-201ENST00000555205 166 ntBASIC1.32□□□□□ -2.2
TRAV41A0A0B4J266 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC1.32□□□□□ -2.2
TRAV41A0A0B4J266 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC1.32□□□□□ -2.2
TRAV41A0A0B4J266 AC104984.5-201ENST00000586878 94 ntBASIC1.32□□□□□ -2.2
TRAV41A0A0B4J266 AL031274.2-201ENST00000599419 203 ntBASIC1.32□□□□□ -2.2
TRAV41A0A0B4J266 AL078605.1-201ENST00000603529 500 ntBASIC1.32□□□□□ -2.2
TRAV41A0A0B4J266 MTCYBP22-201ENST00000603788 447 ntBASIC1.32□□□□□ -2.2
TRAV41A0A0B4J266 AC131235.4-201ENST00000609288 620 ntBASIC1.32□□□□□ -2.2
TRAV41A0A0B4J266 MIR6715A-201ENST00000615929 79 ntBASIC1.32□□□□□ -2.2
TRAV41A0A0B4J266 AL121895.2-201ENST00000619558 447 ntBASIC1.32□□□□□ -2.2
TRAV41A0A0B4J266 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC1.32□□□□□ -2.2
TRAV41A0A0B4J266 AC112204.3-201ENST00000623822 332 ntBASIC1.32□□□□□ -2.2
TRAV41A0A0B4J266 AC097655.1-201ENST00000635075 318 ntBASIC1.32□□□□□ -2.2
TRAV41A0A0B4J266 LINC02211-204ENST00000642024 1070 ntBASIC1.32□□□□□ -2.2
TRAV41A0A0B4J266 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.31□□□□□ -2.2
TRAV41A0A0B4J266 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
TRAV41A0A0B4J266 RNU6-188P-201ENST00000364207 107 ntBASIC1.31□□□□□ -2.2
TRAV41A0A0B4J266 MIR19A-201ENST00000384878 82 ntBASIC1.31□□□□□ -2.2
TRAV41A0A0B4J266 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.31□□□□□ -2.2
TRAV41A0A0B4J266 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC1.31□□□□□ -2.2
TRAV41A0A0B4J266 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC1.31□□□□□ -2.2
TRAV41A0A0B4J266 GPM6BP2-201ENST00000432046 144 ntBASIC1.31□□□□□ -2.2
TRAV41A0A0B4J266 RSU1P2-202ENST00000437884 485 ntBASIC1.31□□□□□ -2.2
TRAV41A0A0B4J266 MTND6P13-201ENST00000443510 523 ntBASIC1.31□□□□□ -2.2
TRAV41A0A0B4J266 GPM6BP1-201ENST00000446387 144 ntBASIC1.31□□□□□ -2.2
TRAV41A0A0B4J266 MTCO2P25-201ENST00000447065 681 ntBASIC1.31□□□□□ -2.2
TRAV41A0A0B4J266 MTCO1P27-201ENST00000448269 226 ntBASIC1.31□□□□□ -2.2
TRAV41A0A0B4J266 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.31□□□□□ -2.2
TRAV41A0A0B4J266 AC018437.1-201ENST00000492214 406 ntBASIC1.31□□□□□ -2.2
TRAV41A0A0B4J266 HMGB1P35-201ENST00000503360 598 ntBASIC1.31□□□□□ -2.2
TRAV41A0A0B4J266 AC233702.2-202ENST00000562547 291 ntBASIC1.31□□□□□ -2.2
TRAV41A0A0B4J266 MTND4LP25-201ENST00000570218 163 ntBASIC1.31□□□□□ -2.2
TRAV41A0A0B4J266 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.31□□□□□ -2.2
TRAV41A0A0B4J266 AC010928.2-201ENST00000588017 287 ntBASIC1.31□□□□□ -2.2
TRAV41A0A0B4J266 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC1.31□□□□□ -2.2
TRAV41A0A0B4J266 BNIP3P26-201ENST00000600827 554 ntBASIC1.31□□□□□ -2.2
TRAV41A0A0B4J266 AL606834.3-201ENST00000602615 496 ntBASIC1.31□□□□□ -2.2
TRAV41A0A0B4J266 AC011939.3-201ENST00000613686 466 ntBASIC1.31□□□□□ -2.2
TRAV41A0A0B4J266 AC091953.2-201ENST00000623979 160 ntBASIC1.31□□□□□ -2.2
TRAV41A0A0B4J266 MTND4P23-201ENST00000447723 1363 ntBASIC1.31□□□□□ -2.2
TRAV41A0A0B4J266 MTND5P33-201ENST00000571250 1450 ntBASIC1.31□□□□□ -2.2
TRAV41A0A0B4J266 UBE2L2-201ENST00000254302 429 ntBASIC1.3□□□□□ -2.2
TRAV41A0A0B4J266 NACAP2-201ENST00000318548 624 ntBASIC1.3□□□□□ -2.2
TRAV41A0A0B4J266 RNU6-560P-201ENST00000364007 108 ntBASIC1.3□□□□□ -2.2
TRAV41A0A0B4J266 SNORA8-201ENST00000384574 139 ntBASIC1.3□□□□□ -2.2
TRAV41A0A0B4J266 RNU6-19P-201ENST00000384718 107 ntBASIC1.3□□□□□ -2.2
TRAV41A0A0B4J266 MIR95-201ENST00000385072 81 ntBASIC1.3□□□□□ -2.2
TRAV41A0A0B4J266 OR51A5P-201ENST00000415429 942 ntBASIC1.3□□□□□ -2.2
TRAV41A0A0B4J266 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC1.3□□□□□ -2.2
TRAV41A0A0B4J266 CYCSP49-201ENST00000420810 319 ntBASIC1.3□□□□□ -2.2
TRAV41A0A0B4J266 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC1.3□□□□□ -2.2
TRAV41A0A0B4J266 PGBD4P6-201ENST00000421501 610 ntBASIC1.3□□□□□ -2.2
TRAV41A0A0B4J266 PTGES3P4-201ENST00000426243 356 ntBASIC1.3□□□□□ -2.2
TRAV41A0A0B4J266 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC1.3□□□□□ -2.2
TRAV41A0A0B4J266 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC1.3□□□□□ -2.2
TRAV41A0A0B4J266 AC005094.1-201ENST00000440420 368 ntBASIC1.3□□□□□ -2.2
TRAV41A0A0B4J266 AC092001.1-201ENST00000453012 261 ntBASIC1.3□□□□□ -2.2
TRAV41A0A0B4J266 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.3□□□□□ -2.2
TRAV41A0A0B4J266 snoU13.23-201ENST00000458863 104 ntBASIC1.3□□□□□ -2.2
TRAV41A0A0B4J266 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
TRAV41A0A0B4J266 AC011005.2-201ENST00000487324 359 ntBASIC1.3□□□□□ -2.2
TRAV41A0A0B4J266 CKS1BP2-201ENST00000497342 240 ntBASIC1.3□□□□□ -2.2
TRAV41A0A0B4J266 SNORA31.3-201ENST00000516029 96 ntBASIC1.3□□□□□ -2.2
TRAV41A0A0B4J266 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.3□□□□□ -2.2
TRAV41A0A0B4J266 LRRC6P1-201ENST00000532188 885 ntBASIC1.3□□□□□ -2.2
TRAV41A0A0B4J266 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
TRAV41A0A0B4J266 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC1.3□□□□□ -2.2
TRAV41A0A0B4J266 MRPS36P5-201ENST00000551909 298 ntBASIC1.3□□□□□ -2.2
TRAV41A0A0B4J266 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC1.3□□□□□ -2.2
TRAV41A0A0B4J266 AC090079.2-201ENST00000575289 768 ntBASIC1.3□□□□□ -2.2
TRAV41A0A0B4J266 MIR3683-201ENST00000580847 82 ntBASIC1.3□□□□□ -2.2
TRAV41A0A0B4J266 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
TRAV41A0A0B4J266 MIR4293-201ENST00000584305 78 ntBASIC1.3□□□□□ -2.2
TRAV41A0A0B4J266 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC1.3□□□□□ -2.2
TRAV41A0A0B4J266 AL355598.1-201ENST00000604169 202 ntBASIC1.3□□□□□ -2.2
TRAV41A0A0B4J266 AC104763.2-201ENST00000604179 382 ntBASIC1.3□□□□□ -2.2
TRAV41A0A0B4J266 AF129408.1-201ENST00000608767 431 ntBASIC1.3□□□□□ -2.2
TRAV41A0A0B4J266 AL133445.2-201ENST00000611191 527 ntBASIC1.3□□□□□ -2.2
TRAV41A0A0B4J266 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC1.3□□□□□ -2.2
TRAV41A0A0B4J266 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC1.3□□□□□ -2.2
TRAV41A0A0B4J266 AP000676.3-201ENST00000623299 569 ntBASIC1.3□□□□□ -2.2
TRAV41A0A0B4J266 AC116618.1-201ENST00000634617 774 ntBASIC1.3□□□□□ -2.2
TRAV41A0A0B4J266 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.3□□□□□ -2.2
TRAV41A0A0B4J266 ZNF876P-202ENST00000398732 1485 ntBASIC1.3□□□□□ -2.2
TRAV41A0A0B4J266 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.29□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 116.7 ms