Protein–RNA interactions for Protein: A0A0B4J248

TRAV1-1, T-cell receptor alpha variable 1-1 (Fragment), humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1A0A0B4J248 MIR3198-2-201ENST00000577868 80 ntBASIC1.12□□□□□ -2.23
TRAV1-1A0A0B4J248 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC1.12□□□□□ -2.23
TRAV1-1A0A0B4J248 AL713866.2-201ENST00000603579 219 ntBASIC1.12□□□□□ -2.23
TRAV1-1A0A0B4J248 AC069545.1-201ENST00000605671 358 ntBASIC1.12□□□□□ -2.23
TRAV1-1A0A0B4J248 AC103810.8-201ENST00000607347 118 ntBASIC1.12□□□□□ -2.23
TRAV1-1A0A0B4J248 AC092953.2-201ENST00000608000 699 ntBASIC1.12□□□□□ -2.23
TRAV1-1A0A0B4J248 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
TRAV1-1A0A0B4J248 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.12□□□□□ -2.23
TRAV1-1A0A0B4J248 AL359314.1-201ENST00000616913 261 ntBASIC1.12□□□□□ -2.23
TRAV1-1A0A0B4J248 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC1.12□□□□□ -2.23
TRAV1-1A0A0B4J248 AC091812.1-201ENST00000432235 1948 ntBASIC1.12□□□□□ -2.23
TRAV1-1A0A0B4J248 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.12□□□□□ -2.23
TRAV1-1A0A0B4J248 PCF11-AS1-201ENST00000602322 1516 ntBASIC1.11□□□□□ -2.23
TRAV1-1A0A0B4J248 AC092447.10-201ENST00000620607 1652 ntBASIC1.11□□□□□ -2.23
TRAV1-1A0A0B4J248 AL589826.1-201ENST00000340697 249 ntBASIC1.11□□□□□ -2.23
TRAV1-1A0A0B4J248 U8.1-201ENST00000362843 134 ntBASIC1.11□□□□□ -2.23
TRAV1-1A0A0B4J248 RNU6-188P-201ENST00000364207 107 ntBASIC1.11□□□□□ -2.23
TRAV1-1A0A0B4J248 MTND3P20-201ENST00000407663 186 ntBASIC1.11□□□□□ -2.23
TRAV1-1A0A0B4J248 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC1.11□□□□□ -2.23
TRAV1-1A0A0B4J248 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.11□□□□□ -2.23
TRAV1-1A0A0B4J248 UBE2FP1-201ENST00000416536 447 ntBASIC1.11□□□□□ -2.23
TRAV1-1A0A0B4J248 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC1.11□□□□□ -2.23
TRAV1-1A0A0B4J248 UBE2D3P3-201ENST00000426992 425 ntBASIC1.11□□□□□ -2.23
TRAV1-1A0A0B4J248 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
TRAV1-1A0A0B4J248 MTCO1P53-201ENST00000441633 699 ntBASIC1.11□□□□□ -2.23
TRAV1-1A0A0B4J248 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC1.11□□□□□ -2.23
TRAV1-1A0A0B4J248 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC1.11□□□□□ -2.23
TRAV1-1A0A0B4J248 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.11□□□□□ -2.23
TRAV1-1A0A0B4J248 RN7SKP258-201ENST00000517151 304 ntBASIC1.11□□□□□ -2.23
TRAV1-1A0A0B4J248 CA1-215ENST00000522389 551 ntTSL 3 BASIC1.11□□□□□ -2.23
TRAV1-1A0A0B4J248 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC1.11□□□□□ -2.23
TRAV1-1A0A0B4J248 AC023538.1-201ENST00000534576 736 ntBASIC1.11□□□□□ -2.23
TRAV1-1A0A0B4J248 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC1.11□□□□□ -2.23
TRAV1-1A0A0B4J248 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.11□□□□□ -2.23
TRAV1-1A0A0B4J248 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC1.11□□□□□ -2.23
TRAV1-1A0A0B4J248 MIR5708-201ENST00000579723 85 ntBASIC1.11□□□□□ -2.23
TRAV1-1A0A0B4J248 VN1R87P-201ENST00000596706 487 ntBASIC1.11□□□□□ -2.23
TRAV1-1A0A0B4J248 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC1.11□□□□□ -2.23
TRAV1-1A0A0B4J248 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.11□□□□□ -2.23
TRAV1-1A0A0B4J248 SEPT7P9-203ENST00000604116 343 ntBASIC1.11□□□□□ -2.23
TRAV1-1A0A0B4J248 AL391813.2-201ENST00000609113 322 ntBASIC1.11□□□□□ -2.23
TRAV1-1A0A0B4J248 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.11□□□□□ -2.23
TRAV1-1A0A0B4J248 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC1.11□□□□□ -2.23
TRAV1-1A0A0B4J248 AC006338.1-201ENST00000618453 749 ntBASIC1.11□□□□□ -2.23
TRAV1-1A0A0B4J248 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.11□□□□□ -2.23
TRAV1-1A0A0B4J248 Z99571.1-201ENST00000636677 394 ntBASIC1.11□□□□□ -2.23
TRAV1-1A0A0B4J248 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
TRAV1-1A0A0B4J248 AC099063.3-201ENST00000642066 185 ntBASIC1.11□□□□□ -2.23
TRAV1-1A0A0B4J248 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC1.1□□□□□ -2.23
TRAV1-1A0A0B4J248 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC1.1□□□□□ -2.23
TRAV1-1A0A0B4J248 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC1.1□□□□□ -2.23
TRAV1-1A0A0B4J248 RNU6-432P-201ENST00000384196 109 ntBASIC1.1□□□□□ -2.23
TRAV1-1A0A0B4J248 RNU6-1122P-201ENST00000384449 107 ntBASIC1.1□□□□□ -2.23
TRAV1-1A0A0B4J248 RNU6-658P-201ENST00000384606 106 ntBASIC1.1□□□□□ -2.23
TRAV1-1A0A0B4J248 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC1.1□□□□□ -2.23
TRAV1-1A0A0B4J248 U8.13-201ENST00000390842 128 ntBASIC1.1□□□□□ -2.23
TRAV1-1A0A0B4J248 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC1.1□□□□□ -2.23
TRAV1-1A0A0B4J248 BTF3L4P3-201ENST00000418879 476 ntBASIC1.1□□□□□ -2.23
TRAV1-1A0A0B4J248 GPM6BP2-201ENST00000432046 144 ntBASIC1.1□□□□□ -2.23
TRAV1-1A0A0B4J248 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC1.1□□□□□ -2.23
TRAV1-1A0A0B4J248 AL353706.1-201ENST00000436728 494 ntBASIC1.1□□□□□ -2.23
TRAV1-1A0A0B4J248 AC118469.1-201ENST00000442943 488 ntBASIC1.1□□□□□ -2.23
TRAV1-1A0A0B4J248 MTCYBP42-201ENST00000444653 1130 ntBASIC1.1□□□□□ -2.23
TRAV1-1A0A0B4J248 AC007677.1-201ENST00000445757 515 ntBASIC1.1□□□□□ -2.23
TRAV1-1A0A0B4J248 GPM6BP1-201ENST00000446387 144 ntBASIC1.1□□□□□ -2.23
TRAV1-1A0A0B4J248 MTND1P31-201ENST00000449206 961 ntBASIC1.1□□□□□ -2.23
TRAV1-1A0A0B4J248 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC1.1□□□□□ -2.23
TRAV1-1A0A0B4J248 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.1□□□□□ -2.23
TRAV1-1A0A0B4J248 RPL7P43-201ENST00000478876 753 ntBASIC1.1□□□□□ -2.23
TRAV1-1A0A0B4J248 TPT1P8-201ENST00000510120 555 ntBASIC1.1□□□□□ -2.23
TRAV1-1A0A0B4J248 AC093752.1-206ENST00000511823 336 ntBASIC1.1□□□□□ -2.23
TRAV1-1A0A0B4J248 RNU6-581P-201ENST00000516214 105 ntBASIC1.1□□□□□ -2.23
TRAV1-1A0A0B4J248 RNU6-362P-201ENST00000516736 90 ntBASIC1.1□□□□□ -2.23
TRAV1-1A0A0B4J248 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC1.1□□□□□ -2.23
TRAV1-1A0A0B4J248 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC1.1□□□□□ -2.23
TRAV1-1A0A0B4J248 AC104417.1-201ENST00000523974 751 ntBASIC1.1□□□□□ -2.23
TRAV1-1A0A0B4J248 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.1□□□□□ -2.23
TRAV1-1A0A0B4J248 GNAI2P1-201ENST00000541815 315 ntBASIC1.1□□□□□ -2.23
TRAV1-1A0A0B4J248 ZKSCAN7P1-201ENST00000543668 673 ntBASIC1.1□□□□□ -2.23
TRAV1-1A0A0B4J248 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC1.1□□□□□ -2.23
TRAV1-1A0A0B4J248 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC1.1□□□□□ -2.23
TRAV1-1A0A0B4J248 MIR3912-201ENST00000577566 105 ntBASIC1.1□□□□□ -2.23
TRAV1-1A0A0B4J248 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC1.1□□□□□ -2.23
TRAV1-1A0A0B4J248 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC1.1□□□□□ -2.23
TRAV1-1A0A0B4J248 AC073544.2-201ENST00000601155 540 ntBASIC1.1□□□□□ -2.23
TRAV1-1A0A0B4J248 BBIP1P1-201ENST00000602999 279 ntBASIC1.1□□□□□ -2.23
TRAV1-1A0A0B4J248 AC021171.1-201ENST00000603137 706 ntBASIC1.1□□□□□ -2.23
TRAV1-1A0A0B4J248 AC025754.2-201ENST00000606491 432 ntBASIC1.1□□□□□ -2.23
TRAV1-1A0A0B4J248 AC009318.2-201ENST00000610917 651 ntBASIC1.1□□□□□ -2.23
TRAV1-1A0A0B4J248 AC091834.1-201ENST00000614543 472 ntBASIC1.1□□□□□ -2.23
TRAV1-1A0A0B4J248 MIR6134-201ENST00000617606 109 ntBASIC1.1□□□□□ -2.23
TRAV1-1A0A0B4J248 AC013470.4-201ENST00000619978 986 ntBASIC1.1□□□□□ -2.23
TRAV1-1A0A0B4J248 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC1.1□□□□□ -2.23
TRAV1-1A0A0B4J248 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC1.1□□□□□ -2.23
TRAV1-1A0A0B4J248 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC1.1□□□□□ -2.23
TRAV1-1A0A0B4J248 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.23
TRAV1-1A0A0B4J248 MTND4P23-201ENST00000447723 1363 ntBASIC1.09□□□□□ -2.23
TRAV1-1A0A0B4J248 Y_RNA.408-201ENST00000383987 102 ntBASIC1.09□□□□□ -2.23
TRAV1-1A0A0B4J248 MIR150-201ENST00000385048 84 ntBASIC1.09□□□□□ -2.23
TRAV1-1A0A0B4J248 MTCO1P56-201ENST00000401674 224 ntBASIC1.09□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 122 ms