Protein–RNA interactions for Protein: Q9Y3Y2

CHTOP, Chromatin target of PRMT1 protein, humanhuman

Known RBP Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOPQ9Y3Y2 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC1.69□□□□□ -2.14
CHTOPQ9Y3Y2 AC087499.2-201ENST00000432861 149 ntBASIC1.69□□□□□ -2.14
CHTOPQ9Y3Y2 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC1.69□□□□□ -2.14
CHTOPQ9Y3Y2 AL451074.3-201ENST00000437709 472 ntBASIC1.69□□□□□ -2.14
CHTOPQ9Y3Y2 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC1.69□□□□□ -2.14
CHTOPQ9Y3Y2 HMGN1P5-201ENST00000448591 263 ntBASIC1.69□□□□□ -2.14
CHTOPQ9Y3Y2 AC112492.4-201ENST00000456549 352 ntBASIC1.69□□□□□ -2.14
CHTOPQ9Y3Y2 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.69□□□□□ -2.14
CHTOPQ9Y3Y2 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC1.69□□□□□ -2.14
CHTOPQ9Y3Y2 FAM92A1P2-202ENST00000504766 877 ntBASIC1.69□□□□□ -2.14
CHTOPQ9Y3Y2 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC1.69□□□□□ -2.14
CHTOPQ9Y3Y2 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC1.69□□□□□ -2.14
CHTOPQ9Y3Y2 AC243972.3-201ENST00000539655 198 ntBASIC1.69□□□□□ -2.14
CHTOPQ9Y3Y2 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC1.69□□□□□ -2.14
CHTOPQ9Y3Y2 AC061975.8-201ENST00000587058 721 ntBASIC1.69□□□□□ -2.14
CHTOPQ9Y3Y2 BNIP3P30-201ENST00000601184 574 ntBASIC1.69□□□□□ -2.14
CHTOPQ9Y3Y2 AC116312.1-201ENST00000606841 314 ntBASIC1.69□□□□□ -2.14
CHTOPQ9Y3Y2 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC1.69□□□□□ -2.14
CHTOPQ9Y3Y2 AC012150.2-201ENST00000621300 544 ntBASIC1.69□□□□□ -2.14
CHTOPQ9Y3Y2 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.69□□□□□ -2.14
CHTOPQ9Y3Y2 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC1.69□□□□□ -2.14
CHTOPQ9Y3Y2 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
CHTOPQ9Y3Y2 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
CHTOPQ9Y3Y2 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
CHTOPQ9Y3Y2 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
CHTOPQ9Y3Y2 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.68□□□□□ -2.14
CHTOPQ9Y3Y2 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
CHTOPQ9Y3Y2 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC1.68□□□□□ -2.14
CHTOPQ9Y3Y2 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
CHTOPQ9Y3Y2 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
CHTOPQ9Y3Y2 AL356292.1-201ENST00000283110 373 ntBASIC1.68□□□□□ -2.14
CHTOPQ9Y3Y2 SNORD46.1-201ENST00000364139 104 ntBASIC1.68□□□□□ -2.14
CHTOPQ9Y3Y2 RNU6-14P-201ENST00000384630 106 ntBASIC1.68□□□□□ -2.14
CHTOPQ9Y3Y2 RNU6-1025P-201ENST00000410629 104 ntBASIC1.68□□□□□ -2.14
CHTOPQ9Y3Y2 RN7SKP284-201ENST00000411002 343 ntBASIC1.68□□□□□ -2.14
CHTOPQ9Y3Y2 EEF1A1P41-201ENST00000414667 207 ntBASIC1.68□□□□□ -2.14
CHTOPQ9Y3Y2 AC006946.1-201ENST00000429106 328 ntBASIC1.68□□□□□ -2.14
CHTOPQ9Y3Y2 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC1.68□□□□□ -2.14
CHTOPQ9Y3Y2 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC1.68□□□□□ -2.14
CHTOPQ9Y3Y2 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC1.68□□□□□ -2.14
CHTOPQ9Y3Y2 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC1.68□□□□□ -2.14
CHTOPQ9Y3Y2 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC1.68□□□□□ -2.14
CHTOPQ9Y3Y2 PRELID3BP1-201ENST00000457142 540 ntBASIC1.68□□□□□ -2.14
CHTOPQ9Y3Y2 SNORD97-201ENST00000459187 142 ntBASIC1.68□□□□□ -2.14
CHTOPQ9Y3Y2 MTND1P3-201ENST00000484956 952 ntBASIC1.68□□□□□ -2.14
CHTOPQ9Y3Y2 AL358832.1-201ENST00000497800 389 ntBASIC1.68□□□□□ -2.14
CHTOPQ9Y3Y2 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
CHTOPQ9Y3Y2 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC1.68□□□□□ -2.14
CHTOPQ9Y3Y2 PTP4A1P4-201ENST00000512479 322 ntBASIC1.68□□□□□ -2.14
CHTOPQ9Y3Y2 MTND2P31-201ENST00000512602 616 ntBASIC1.68□□□□□ -2.14
CHTOPQ9Y3Y2 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC1.68□□□□□ -2.14
CHTOPQ9Y3Y2 RNU6-677P-201ENST00000516914 101 ntBASIC1.68□□□□□ -2.14
CHTOPQ9Y3Y2 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC1.68□□□□□ -2.14
CHTOPQ9Y3Y2 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC1.68□□□□□ -2.14
CHTOPQ9Y3Y2 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC1.68□□□□□ -2.14
CHTOPQ9Y3Y2 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC1.68□□□□□ -2.14
CHTOPQ9Y3Y2 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC1.68□□□□□ -2.14
CHTOPQ9Y3Y2 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.68□□□□□ -2.14
CHTOPQ9Y3Y2 AC007363.1-201ENST00000604736 620 ntBASIC1.68□□□□□ -2.14
CHTOPQ9Y3Y2 AC007179.3-201ENST00000604976 235 ntBASIC1.68□□□□□ -2.14
CHTOPQ9Y3Y2 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC1.68□□□□□ -2.14
CHTOPQ9Y3Y2 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC1.68□□□□□ -2.14
CHTOPQ9Y3Y2 PART1_2.1-201ENST00000612397 250 ntBASIC1.68□□□□□ -2.14
CHTOPQ9Y3Y2 ATP5A1P2-202ENST00000616464 443 ntBASIC1.68□□□□□ -2.14
CHTOPQ9Y3Y2 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC1.68□□□□□ -2.14
CHTOPQ9Y3Y2 HAUS6P2-201ENST00000433254 2404 ntBASIC1.67□□□□□ -2.14
CHTOPQ9Y3Y2 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
CHTOPQ9Y3Y2 MIR422A-201ENST00000362286 90 ntBASIC1.67□□□□□ -2.14
CHTOPQ9Y3Y2 RNA5SP374-201ENST00000362939 125 ntBASIC1.67□□□□□ -2.14
CHTOPQ9Y3Y2 SNORA38.1-201ENST00000364172 131 ntBASIC1.67□□□□□ -2.14
CHTOPQ9Y3Y2 SNORA18.3-201ENST00000384122 132 ntBASIC1.67□□□□□ -2.14
CHTOPQ9Y3Y2 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
CHTOPQ9Y3Y2 CISD1P1-201ENST00000393907 327 ntBASIC1.67□□□□□ -2.14
CHTOPQ9Y3Y2 AC119751.3-201ENST00000399720 670 ntBASIC1.67□□□□□ -2.14
CHTOPQ9Y3Y2 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC1.67□□□□□ -2.14
CHTOPQ9Y3Y2 SUMO2P12-201ENST00000405924 140 ntBASIC1.67□□□□□ -2.14
CHTOPQ9Y3Y2 MIR1305-201ENST00000408300 86 ntBASIC1.67□□□□□ -2.14
CHTOPQ9Y3Y2 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC1.67□□□□□ -2.14
CHTOPQ9Y3Y2 AC009310.1-201ENST00000414414 451 ntBASIC1.67□□□□□ -2.14
CHTOPQ9Y3Y2 VPS26BP1-201ENST00000417155 755 ntBASIC1.67□□□□□ -2.14
CHTOPQ9Y3Y2 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC1.67□□□□□ -2.14
CHTOPQ9Y3Y2 AL591212.2-201ENST00000433923 257 ntBASIC1.67□□□□□ -2.14
CHTOPQ9Y3Y2 IFNA20P-201ENST00000436840 528 ntBASIC1.67□□□□□ -2.14
CHTOPQ9Y3Y2 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1.67□□□□□ -2.14
CHTOPQ9Y3Y2 RPS3AP22-201ENST00000488297 769 ntBASIC1.67□□□□□ -2.14
CHTOPQ9Y3Y2 AC026427.2-201ENST00000506228 536 ntBASIC1.67□□□□□ -2.14
CHTOPQ9Y3Y2 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC1.67□□□□□ -2.14
CHTOPQ9Y3Y2 AP003392.2-201ENST00000527269 208 ntBASIC1.67□□□□□ -2.14
CHTOPQ9Y3Y2 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC1.67□□□□□ -2.14
CHTOPQ9Y3Y2 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC1.67□□□□□ -2.14
CHTOPQ9Y3Y2 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC1.67□□□□□ -2.14
CHTOPQ9Y3Y2 AC234778.2-201ENST00000566241 354 ntBASIC1.67□□□□□ -2.14
CHTOPQ9Y3Y2 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC1.67□□□□□ -2.14
CHTOPQ9Y3Y2 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC1.67□□□□□ -2.14
CHTOPQ9Y3Y2 AC096577.2-201ENST00000611455 153 ntBASIC1.67□□□□□ -2.14
CHTOPQ9Y3Y2 AL589994.2-201ENST00000621124 579 ntBASIC1.67□□□□□ -2.14
CHTOPQ9Y3Y2 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.67□□□□□ -2.14
CHTOPQ9Y3Y2 RNU6-655P-201ENST00000362858 107 ntBASIC1.66□□□□□ -2.14
CHTOPQ9Y3Y2 RNU6-529P-201ENST00000363383 104 ntBASIC1.66□□□□□ -2.14
CHTOPQ9Y3Y2 Y_RNA.333-201ENST00000365274 102 ntBASIC1.66□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms