Protein–RNA interactions for Protein: Q9Y3E7

CHMP3, Charged multivesicular body protein 3, humanhuman

Predictions only

Length 222 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3Q9Y3E7 SNORA69.1-201ENST00000390904 137 ntBASIC5.24□□□□□ -1.57
CHMP3Q9Y3E7 RNU2-25P-201ENST00000411041 191 ntBASIC5.24□□□□□ -1.57
CHMP3Q9Y3E7 AL356095.1-201ENST00000417217 199 ntBASIC5.24□□□□□ -1.57
CHMP3Q9Y3E7 EIF4EP2-201ENST00000422816 654 ntBASIC5.24□□□□□ -1.57
CHMP3Q9Y3E7 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC5.24□□□□□ -1.57
CHMP3Q9Y3E7 AL139109.1-201ENST00000455491 297 ntBASIC5.24□□□□□ -1.57
CHMP3Q9Y3E7 PRELID3BP1-201ENST00000457142 540 ntBASIC5.24□□□□□ -1.57
CHMP3Q9Y3E7 RPL7AP28-201ENST00000464513 571 ntBASIC5.24□□□□□ -1.57
CHMP3Q9Y3E7 AC133134.1-201ENST00000466800 359 ntBASIC5.24□□□□□ -1.57
CHMP3Q9Y3E7 RNU6-927P-201ENST00000516199 100 ntBASIC5.24□□□□□ -1.57
CHMP3Q9Y3E7 AC134698.5-201ENST00000519444 336 ntBASIC5.24□□□□□ -1.57
CHMP3Q9Y3E7 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC5.24□□□□□ -1.57
CHMP3Q9Y3E7 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC5.24□□□□□ -1.57
CHMP3Q9Y3E7 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC5.24□□□□□ -1.57
CHMP3Q9Y3E7 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC5.24□□□□□ -1.57
CHMP3Q9Y3E7 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC5.24□□□□□ -1.57
CHMP3Q9Y3E7 AC009314.1-201ENST00000603871 304 ntBASIC5.24□□□□□ -1.57
CHMP3Q9Y3E7 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC5.24□□□□□ -1.57
CHMP3Q9Y3E7 AC009812.4-201ENST00000569134 1805 ntBASIC5.24□□□□□ -1.57
CHMP3Q9Y3E7 SUPT16HP1-201ENST00000537175 3133 ntBASIC5.24□□□□□ -1.57
CHMP3Q9Y3E7 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CHMP3Q9Y3E7 BBX-203ENST00000402543 3980 ntTSL 5 BASIC5.24□□□□□ -1.57
CHMP3Q9Y3E7 RLIMP1-201ENST00000339626 1680 ntBASIC5.24□□□□□ -1.57
CHMP3Q9Y3E7 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC5.24□□□□□ -1.57
CHMP3Q9Y3E7 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC5.24□□□□□ -1.57
CHMP3Q9Y3E7 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CHMP3Q9Y3E7 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC5.23□□□□□ -1.57
CHMP3Q9Y3E7 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC5.23□□□□□ -1.57
CHMP3Q9Y3E7 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
CHMP3Q9Y3E7 AL157777.2-201ENST00000258070 137 ntBASIC5.23□□□□□ -1.57
CHMP3Q9Y3E7 RNU6-384P-201ENST00000364900 104 ntBASIC5.23□□□□□ -1.57
CHMP3Q9Y3E7 RNA5SP22-201ENST00000365393 109 ntBASIC5.23□□□□□ -1.57
CHMP3Q9Y3E7 Y_RNA.416-201ENST00000384014 113 ntBASIC5.23□□□□□ -1.57
CHMP3Q9Y3E7 RNU6-611P-201ENST00000384276 104 ntBASIC5.23□□□□□ -1.57
CHMP3Q9Y3E7 RPL21P65-201ENST00000406094 466 ntBASIC5.23□□□□□ -1.57
CHMP3Q9Y3E7 Y_RNA.592-201ENST00000410274 109 ntBASIC5.23□□□□□ -1.57
CHMP3Q9Y3E7 MTCO3P19-201ENST00000415864 321 ntBASIC5.23□□□□□ -1.57
CHMP3Q9Y3E7 AC007098.1-201ENST00000420122 367 ntBASIC5.23□□□□□ -1.57
CHMP3Q9Y3E7 AL117339.2-201ENST00000430475 180 ntBASIC5.23□□□□□ -1.57
CHMP3Q9Y3E7 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC5.23□□□□□ -1.57
CHMP3Q9Y3E7 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC5.23□□□□□ -1.57
CHMP3Q9Y3E7 AL162151.2-201ENST00000448875 158 ntBASIC5.23□□□□□ -1.57
CHMP3Q9Y3E7 AC104164.2-201ENST00000496953 495 ntBASIC5.23□□□□□ -1.57
CHMP3Q9Y3E7 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
CHMP3Q9Y3E7 SMILR-201ENST00000533992 553 ntTSL 4 BASIC5.23□□□□□ -1.57
CHMP3Q9Y3E7 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC5.23□□□□□ -1.57
CHMP3Q9Y3E7 AL161713.1-201ENST00000555538 145 ntBASIC5.23□□□□□ -1.57
CHMP3Q9Y3E7 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC5.23□□□□□ -1.57
CHMP3Q9Y3E7 AL137100.2-201ENST00000555786 315 ntBASIC5.23□□□□□ -1.57
CHMP3Q9Y3E7 AL157871.3-201ENST00000557231 293 ntBASIC5.23□□□□□ -1.57
CHMP3Q9Y3E7 AC130289.1-201ENST00000577321 73 ntBASIC5.23□□□□□ -1.57
CHMP3Q9Y3E7 AC098826.3-201ENST00000603823 466 ntBASIC5.23□□□□□ -1.57
CHMP3Q9Y3E7 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC5.23□□□□□ -1.57
CHMP3Q9Y3E7 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC5.23□□□□□ -1.57
CHMP3Q9Y3E7 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC5.23□□□□□ -1.57
CHMP3Q9Y3E7 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
CHMP3Q9Y3E7 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CHMP3Q9Y3E7 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CHMP3Q9Y3E7 Y_RNA.84-201ENST00000363011 104 ntBASIC5.22□□□□□ -1.57
CHMP3Q9Y3E7 Y_RNA.183-201ENST00000363882 113 ntBASIC5.22□□□□□ -1.57
CHMP3Q9Y3E7 RNU6-595P-201ENST00000363944 107 ntBASIC5.22□□□□□ -1.57
CHMP3Q9Y3E7 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC5.22□□□□□ -1.57
CHMP3Q9Y3E7 RNU6-837P-201ENST00000391056 108 ntBASIC5.22□□□□□ -1.57
CHMP3Q9Y3E7 RNA5SP494-201ENST00000410653 129 ntBASIC5.22□□□□□ -1.57
CHMP3Q9Y3E7 AL592148.1-201ENST00000413568 445 ntBASIC5.22□□□□□ -1.57
CHMP3Q9Y3E7 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC5.22□□□□□ -1.57
CHMP3Q9Y3E7 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC5.22□□□□□ -1.57
CHMP3Q9Y3E7 RNU6-1037P-201ENST00000459571 107 ntBASIC5.22□□□□□ -1.57
CHMP3Q9Y3E7 AL049874.1-201ENST00000489560 388 ntBASIC5.22□□□□□ -1.57
CHMP3Q9Y3E7 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC5.22□□□□□ -1.57
CHMP3Q9Y3E7 TRAPPC2P2-201ENST00000517589 409 ntBASIC5.22□□□□□ -1.57
CHMP3Q9Y3E7 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC5.22□□□□□ -1.57
CHMP3Q9Y3E7 AC007458.1-201ENST00000542812 373 ntBASIC5.22□□□□□ -1.57
CHMP3Q9Y3E7 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC5.22□□□□□ -1.57
CHMP3Q9Y3E7 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC5.22□□□□□ -1.57
CHMP3Q9Y3E7 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CHMP3Q9Y3E7 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC5.22□□□□□ -1.57
CHMP3Q9Y3E7 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC5.22□□□□□ -1.57
CHMP3Q9Y3E7 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC5.22□□□□□ -1.57
CHMP3Q9Y3E7 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
CHMP3Q9Y3E7 MIR6715B-201ENST00000637172 77 ntBASIC5.22□□□□□ -1.57
CHMP3Q9Y3E7 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC5.22□□□□□ -1.57
CHMP3Q9Y3E7 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CHMP3Q9Y3E7 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
CHMP3Q9Y3E7 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
CHMP3Q9Y3E7 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
CHMP3Q9Y3E7 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CHMP3Q9Y3E7 MTND5P9-201ENST00000503854 1755 ntBASIC5.21□□□□□ -1.57
CHMP3Q9Y3E7 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.57
CHMP3Q9Y3E7 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
CHMP3Q9Y3E7 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CHMP3Q9Y3E7 NCAPGP1-201ENST00000505112 1814 ntBASIC5.21□□□□□ -1.58
CHMP3Q9Y3E7 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC5.21□□□□□ -1.58
CHMP3Q9Y3E7 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CHMP3Q9Y3E7 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
CHMP3Q9Y3E7 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC5.21□□□□□ -1.58
CHMP3Q9Y3E7 AC007685.1-201ENST00000329806 452 ntBASIC5.21□□□□□ -1.58
CHMP3Q9Y3E7 RNA5SP52-201ENST00000362448 134 ntBASIC5.21□□□□□ -1.58
CHMP3Q9Y3E7 Y_RNA.150-201ENST00000363562 102 ntBASIC5.21□□□□□ -1.58
CHMP3Q9Y3E7 Y_RNA.237-201ENST00000364439 102 ntBASIC5.21□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 117.4 ms