Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 AC013468.1-201ENST00000608680 598 ntBASIC1.04□□□□□ -2.24
SHANK2Q9UPX8 AL118508.4-201ENST00000624142 1176 ntBASIC1.04□□□□□ -2.24
SHANK2Q9UPX8 AC073544.1-201ENST00000600110 1595 ntBASIC1.04□□□□□ -2.24
SHANK2Q9UPX8 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC1.03□□□□□ -2.24
SHANK2Q9UPX8 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC1.03□□□□□ -2.24
SHANK2Q9UPX8 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC1.03□□□□□ -2.24
SHANK2Q9UPX8 OR9R1P-201ENST00000412200 877 ntBASIC1.03□□□□□ -2.24
SHANK2Q9UPX8 RPL30P13-201ENST00000418873 348 ntBASIC1.03□□□□□ -2.24
SHANK2Q9UPX8 TRAPPC13P1-201ENST00000435991 1062 ntBASIC1.03□□□□□ -2.24
SHANK2Q9UPX8 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC1.03□□□□□ -2.24
SHANK2Q9UPX8 CASP1-212ENST00000531166 300 ntTSL 5 BASIC1.03□□□□□ -2.24
SHANK2Q9UPX8 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.03□□□□□ -2.24
SHANK2Q9UPX8 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC1.03□□□□□ -2.24
SHANK2Q9UPX8 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC1.03□□□□□ -2.24
SHANK2Q9UPX8 AL133241.1-201ENST00000556832 487 ntBASIC1.03□□□□□ -2.24
SHANK2Q9UPX8 MIR3126-201ENST00000577443 74 ntBASIC1.03□□□□□ -2.24
SHANK2Q9UPX8 AP000254.1-201ENST00000609934 520 ntBASIC1.03□□□□□ -2.24
SHANK2Q9UPX8 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
SHANK2Q9UPX8 ZNF29P-201ENST00000225587 168 ntBASIC1.02□□□□□ -2.25
SHANK2Q9UPX8 RNA5SP331-201ENST00000364986 107 ntBASIC1.02□□□□□ -2.25
SHANK2Q9UPX8 SNORA22-201ENST00000383907 134 ntBASIC1.02□□□□□ -2.25
SHANK2Q9UPX8 RNU6-31P-201ENST00000384388 108 ntBASIC1.02□□□□□ -2.25
SHANK2Q9UPX8 SNORA22C-201ENST00000384614 134 ntBASIC1.02□□□□□ -2.25
SHANK2Q9UPX8 EDDM3CP-201ENST00000415977 425 ntBASIC1.02□□□□□ -2.25
SHANK2Q9UPX8 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC1.02□□□□□ -2.25
SHANK2Q9UPX8 HMGB1P9-201ENST00000429856 646 ntBASIC1.02□□□□□ -2.25
SHANK2Q9UPX8 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC1.02□□□□□ -2.25
SHANK2Q9UPX8 GTF2IP20-201ENST00000431663 360 ntBASIC1.02□□□□□ -2.25
SHANK2Q9UPX8 AC104164.3-201ENST00000467363 1258 ntBASIC1.02□□□□□ -2.25
SHANK2Q9UPX8 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC1.02□□□□□ -2.25
SHANK2Q9UPX8 AC112198.4-201ENST00000515450 351 ntBASIC1.02□□□□□ -2.25
SHANK2Q9UPX8 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC1.02□□□□□ -2.25
SHANK2Q9UPX8 DEFB108D-201ENST00000527787 222 ntBASIC1.02□□□□□ -2.25
SHANK2Q9UPX8 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC1.02□□□□□ -2.25
SHANK2Q9UPX8 FAM60CP-201ENST00000591086 664 ntBASIC1.02□□□□□ -2.25
SHANK2Q9UPX8 AC013244.2-201ENST00000603396 103 ntBASIC1.02□□□□□ -2.25
SHANK2Q9UPX8 AC090132.2-201ENST00000615881 347 ntBASIC1.02□□□□□ -2.25
SHANK2Q9UPX8 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.02□□□□□ -2.25
SHANK2Q9UPX8 AC110491.1-201ENST00000562191 2010 ntBASIC1.02□□□□□ -2.25
SHANK2Q9UPX8 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.01□□□□□ -2.25
SHANK2Q9UPX8 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC1.01□□□□□ -2.25
SHANK2Q9UPX8 MTND2P19-201ENST00000449129 1012 ntBASIC1.01□□□□□ -2.25
SHANK2Q9UPX8 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC1.01□□□□□ -2.25
SHANK2Q9UPX8 AC117454.1-201ENST00000491120 168 ntBASIC1.01□□□□□ -2.25
SHANK2Q9UPX8 OR6C7P-201ENST00000547875 934 ntBASIC1.01□□□□□ -2.25
SHANK2Q9UPX8 AC025588.3-201ENST00000604182 274 ntBASIC1.01□□□□□ -2.25
SHANK2Q9UPX8 AC138473.1-201ENST00000605717 526 ntBASIC1.01□□□□□ -2.25
SHANK2Q9UPX8 AL590410.1-201ENST00000617925 333 ntBASIC1.01□□□□□ -2.25
SHANK2Q9UPX8 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC1.01□□□□□ -2.25
SHANK2Q9UPX8 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC1.01□□□□□ -2.25
SHANK2Q9UPX8 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC1.01□□□□□ -2.25
SHANK2Q9UPX8 ELL2P3-201ENST00000457883 1602 ntBASIC1□□□□□ -2.25
SHANK2Q9UPX8 MIR26B-201ENST00000362251 77 ntBASIC1□□□□□ -2.25
SHANK2Q9UPX8 RNA5SP499-201ENST00000363982 119 ntBASIC1□□□□□ -2.25
SHANK2Q9UPX8 RNU6ATAC31P-201ENST00000408513 126 ntBASIC1□□□□□ -2.25
SHANK2Q9UPX8 RNA5SP511-201ENST00000410487 115 ntBASIC1□□□□□ -2.25
SHANK2Q9UPX8 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC1□□□□□ -2.25
SHANK2Q9UPX8 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC1□□□□□ -2.25
SHANK2Q9UPX8 AC092393.1-201ENST00000439625 742 ntBASIC1□□□□□ -2.25
SHANK2Q9UPX8 OR2A41P-201ENST00000473586 105 ntBASIC1□□□□□ -2.25
SHANK2Q9UPX8 AC147055.4-201ENST00000504399 745 ntBASIC1□□□□□ -2.25
SHANK2Q9UPX8 AC113398.2-201ENST00000507630 558 ntBASIC1□□□□□ -2.25
SHANK2Q9UPX8 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC1□□□□□ -2.25
SHANK2Q9UPX8 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC1□□□□□ -2.25
SHANK2Q9UPX8 AL132857.1-201ENST00000555180 708 ntBASIC1□□□□□ -2.25
SHANK2Q9UPX8 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC1□□□□□ -2.25
SHANK2Q9UPX8 MIR6759-201ENST00000638110 65 ntBASIC1□□□□□ -2.25
SHANK2Q9UPX8 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
SHANK2Q9UPX8 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1□□□□□ -2.25
SHANK2Q9UPX8 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC0.99□□□□□ -2.25
SHANK2Q9UPX8 RNU6-98P-201ENST00000384173 107 ntBASIC0.99□□□□□ -2.25
SHANK2Q9UPX8 SNORA40.19-201ENST00000390846 128 ntBASIC0.99□□□□□ -2.25
SHANK2Q9UPX8 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC0.99□□□□□ -2.25
SHANK2Q9UPX8 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC0.99□□□□□ -2.25
SHANK2Q9UPX8 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
SHANK2Q9UPX8 MIR3921-201ENST00000577308 85 ntBASIC0.99□□□□□ -2.25
SHANK2Q9UPX8 AC012669.1-201ENST00000603209 283 ntBASIC0.99□□□□□ -2.25
SHANK2Q9UPX8 AC135803.1-201ENST00000608748 565 ntBASIC0.99□□□□□ -2.25
SHANK2Q9UPX8 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC0.99□□□□□ -2.25
SHANK2Q9UPX8 MIR7157-201ENST00000635801 60 ntBASIC0.99□□□□□ -2.25
SHANK2Q9UPX8 RNA5SP125-201ENST00000364843 120 ntBASIC0.99□□□□□ -2.25
SHANK2Q9UPX8 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC0.99□□□□□ -2.25
SHANK2Q9UPX8 MIR1303-201ENST00000408625 86 ntBASIC0.99□□□□□ -2.25
SHANK2Q9UPX8 Z99497.1-201ENST00000421282 135 ntBASIC0.99□□□□□ -2.25
SHANK2Q9UPX8 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC0.99□□□□□ -2.25
SHANK2Q9UPX8 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC0.99□□□□□ -2.25
SHANK2Q9UPX8 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC0.99□□□□□ -2.25
SHANK2Q9UPX8 AC092628.1-201ENST00000436250 252 ntBASIC0.99□□□□□ -2.25
SHANK2Q9UPX8 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC0.99□□□□□ -2.25
SHANK2Q9UPX8 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC0.99□□□□□ -2.25
SHANK2Q9UPX8 U4atac.1-201ENST00000618345 95 ntBASIC0.99□□□□□ -2.25
SHANK2Q9UPX8 AC002550.2-201ENST00000621246 394 ntBASIC0.99□□□□□ -2.25
SHANK2Q9UPX8 AL136313.1-201ENST00000624804 202 ntBASIC0.99□□□□□ -2.25
SHANK2Q9UPX8 AP003485.1-201ENST00000625093 753 ntBASIC0.99□□□□□ -2.25
SHANK2Q9UPX8 MIR6866-201ENST00000638146 69 ntBASIC0.99□□□□□ -2.25
SHANK2Q9UPX8 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC0.98□□□□□ -2.25
SHANK2Q9UPX8 MTND4LP10-201ENST00000435146 291 ntBASIC0.98□□□□□ -2.25
SHANK2Q9UPX8 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC0.98□□□□□ -2.25
SHANK2Q9UPX8 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC0.98□□□□□ -2.25
SHANK2Q9UPX8 HMGN1P10-201ENST00000474557 553 ntBASIC0.98□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 113 ms