Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC5.84□□□□□ -1.47
PDZRN3Q9UPQ7 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
PDZRN3Q9UPQ7 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
PDZRN3Q9UPQ7 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
PDZRN3Q9UPQ7 AC025031.4-201ENST00000621248 3271 ntBASIC5.84□□□□□ -1.48
PDZRN3Q9UPQ7 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
PDZRN3Q9UPQ7 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
PDZRN3Q9UPQ7 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5.83□□□□□ -1.48
PDZRN3Q9UPQ7 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
PDZRN3Q9UPQ7 Y_RNA.7-201ENST00000362352 102 ntBASIC5.83□□□□□ -1.48
PDZRN3Q9UPQ7 Y_RNA.136-201ENST00000363444 102 ntBASIC5.83□□□□□ -1.48
PDZRN3Q9UPQ7 RNU6-512P-201ENST00000364438 103 ntBASIC5.83□□□□□ -1.48
PDZRN3Q9UPQ7 Y_RNA.238-201ENST00000364441 102 ntBASIC5.83□□□□□ -1.48
PDZRN3Q9UPQ7 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC5.83□□□□□ -1.48
PDZRN3Q9UPQ7 SNORA37-201ENST00000384504 129 ntBASIC5.83□□□□□ -1.48
PDZRN3Q9UPQ7 MIR23B-201ENST00000384832 97 ntBASIC5.83□□□□□ -1.48
PDZRN3Q9UPQ7 AC063976.4-201ENST00000421971 163 ntBASIC5.83□□□□□ -1.48
PDZRN3Q9UPQ7 RPL23AP58-201ENST00000440453 469 ntBASIC5.83□□□□□ -1.48
PDZRN3Q9UPQ7 AL160314.1-201ENST00000490836 438 ntBASIC5.83□□□□□ -1.48
PDZRN3Q9UPQ7 RNA5SP446-201ENST00000515955 82 ntBASIC5.83□□□□□ -1.48
PDZRN3Q9UPQ7 MIR2355-201ENST00000517199 87 ntBASIC5.83□□□□□ -1.48
PDZRN3Q9UPQ7 SUMO2P18-201ENST00000518873 252 ntBASIC5.83□□□□□ -1.48
PDZRN3Q9UPQ7 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC5.83□□□□□ -1.48
PDZRN3Q9UPQ7 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC5.83□□□□□ -1.48
PDZRN3Q9UPQ7 CASP1P1-201ENST00000526345 212 ntBASIC5.83□□□□□ -1.48
PDZRN3Q9UPQ7 ATP5F1P5-201ENST00000526403 760 ntBASIC5.83□□□□□ -1.48
PDZRN3Q9UPQ7 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
PDZRN3Q9UPQ7 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC5.83□□□□□ -1.48
PDZRN3Q9UPQ7 BDH2P1-201ENST00000602288 736 ntBASIC5.83□□□□□ -1.48
PDZRN3Q9UPQ7 AC116447.1-201ENST00000613153 453 ntBASIC5.83□□□□□ -1.48
PDZRN3Q9UPQ7 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
PDZRN3Q9UPQ7 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
PDZRN3Q9UPQ7 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
PDZRN3Q9UPQ7 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
PDZRN3Q9UPQ7 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
PDZRN3Q9UPQ7 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
PDZRN3Q9UPQ7 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC5.82□□□□□ -1.48
PDZRN3Q9UPQ7 AC022031.1-201ENST00000585985 2593 ntBASIC5.82□□□□□ -1.48
PDZRN3Q9UPQ7 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC5.82□□□□□ -1.48
PDZRN3Q9UPQ7 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC5.82□□□□□ -1.48
PDZRN3Q9UPQ7 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
PDZRN3Q9UPQ7 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC5.82□□□□□ -1.48
PDZRN3Q9UPQ7 RNU6-1284P-201ENST00000363701 100 ntBASIC5.82□□□□□ -1.48
PDZRN3Q9UPQ7 RNA5SP151-201ENST00000365632 117 ntBASIC5.82□□□□□ -1.48
PDZRN3Q9UPQ7 RNU2-2P-201ENST00000410396 191 ntBASIC5.82□□□□□ -1.48
PDZRN3Q9UPQ7 EIF4A1P3-201ENST00000411521 244 ntBASIC5.82□□□□□ -1.48
PDZRN3Q9UPQ7 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC5.82□□□□□ -1.48
PDZRN3Q9UPQ7 AC011998.1-201ENST00000433403 117 ntBASIC5.82□□□□□ -1.48
PDZRN3Q9UPQ7 RPS20P1-201ENST00000434853 354 ntBASIC5.82□□□□□ -1.48
PDZRN3Q9UPQ7 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
PDZRN3Q9UPQ7 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC5.82□□□□□ -1.48
PDZRN3Q9UPQ7 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC5.82□□□□□ -1.48
PDZRN3Q9UPQ7 AL590705.4-201ENST00000532209 134 ntBASIC5.82□□□□□ -1.48
PDZRN3Q9UPQ7 RNU2-4P-201ENST00000606190 192 ntBASIC5.82□□□□□ -1.48
PDZRN3Q9UPQ7 AC005828.6-201ENST00000606610 232 ntBASIC5.82□□□□□ -1.48
PDZRN3Q9UPQ7 AC091979.2-201ENST00000607514 214 ntBASIC5.82□□□□□ -1.48
PDZRN3Q9UPQ7 U2.15-201ENST00000611544 191 ntBASIC5.82□□□□□ -1.48
PDZRN3Q9UPQ7 U2.16-201ENST00000613119 191 ntBASIC5.82□□□□□ -1.48
PDZRN3Q9UPQ7 U2.12-201ENST00000613778 191 ntBASIC5.82□□□□□ -1.48
PDZRN3Q9UPQ7 AL590099.1-201ENST00000615276 138 ntBASIC5.82□□□□□ -1.48
PDZRN3Q9UPQ7 U2.9-201ENST00000615427 191 ntBASIC5.82□□□□□ -1.48
PDZRN3Q9UPQ7 U2.11-201ENST00000616345 191 ntBASIC5.82□□□□□ -1.48
PDZRN3Q9UPQ7 U2.2-201ENST00000616535 191 ntBASIC5.82□□□□□ -1.48
PDZRN3Q9UPQ7 U2.3-201ENST00000617785 191 ntBASIC5.82□□□□□ -1.48
PDZRN3Q9UPQ7 U2.19-201ENST00000618602 191 ntBASIC5.82□□□□□ -1.48
PDZRN3Q9UPQ7 RNU2-1-201ENST00000618664 191 ntBASIC5.82□□□□□ -1.48
PDZRN3Q9UPQ7 U2.6-201ENST00000619225 191 ntBASIC5.82□□□□□ -1.48
PDZRN3Q9UPQ7 U2.5-201ENST00000619465 191 ntBASIC5.82□□□□□ -1.48
PDZRN3Q9UPQ7 U2.10-201ENST00000620268 191 ntBASIC5.82□□□□□ -1.48
PDZRN3Q9UPQ7 AC140113.4-201ENST00000622087 222 ntBASIC5.82□□□□□ -1.48
PDZRN3Q9UPQ7 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC5.82□□□□□ -1.48
PDZRN3Q9UPQ7 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC5.82□□□□□ -1.48
PDZRN3Q9UPQ7 AC110491.1-201ENST00000562191 2010 ntBASIC5.82□□□□□ -1.48
PDZRN3Q9UPQ7 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
PDZRN3Q9UPQ7 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC5.82□□□□□ -1.48
PDZRN3Q9UPQ7 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
PDZRN3Q9UPQ7 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
PDZRN3Q9UPQ7 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
PDZRN3Q9UPQ7 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC5.81□□□□□ -1.48
PDZRN3Q9UPQ7 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC5.81□□□□□ -1.48
PDZRN3Q9UPQ7 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
PDZRN3Q9UPQ7 AL136164.3-201ENST00000624429 3978 ntBASIC5.81□□□□□ -1.48
PDZRN3Q9UPQ7 MAPK10-304ENST00000641341 3984 ntBASIC5.81□□□□□ -1.48
PDZRN3Q9UPQ7 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
PDZRN3Q9UPQ7 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
PDZRN3Q9UPQ7 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
PDZRN3Q9UPQ7 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
PDZRN3Q9UPQ7 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
PDZRN3Q9UPQ7 Y_RNA.495-201ENST00000384435 112 ntBASIC5.81□□□□□ -1.48
PDZRN3Q9UPQ7 MIR921-201ENST00000401133 56 ntBASIC5.81□□□□□ -1.48
PDZRN3Q9UPQ7 RN7SKP167-201ENST00000411047 285 ntBASIC5.81□□□□□ -1.48
PDZRN3Q9UPQ7 CYCSP33-201ENST00000414485 327 ntBASIC5.81□□□□□ -1.48
PDZRN3Q9UPQ7 RPL12P46-201ENST00000436610 195 ntBASIC5.81□□□□□ -1.48
PDZRN3Q9UPQ7 RNU7-87P-201ENST00000459343 62 ntBASIC5.81□□□□□ -1.48
PDZRN3Q9UPQ7 PLGLA-201ENST00000465668 449 ntBASIC5.81□□□□□ -1.48
PDZRN3Q9UPQ7 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC5.81□□□□□ -1.48
PDZRN3Q9UPQ7 RN7SKP179-201ENST00000516126 217 ntBASIC5.81□□□□□ -1.48
PDZRN3Q9UPQ7 Y_RNA.689-201ENST00000516589 107 ntBASIC5.81□□□□□ -1.48
PDZRN3Q9UPQ7 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC5.81□□□□□ -1.48
PDZRN3Q9UPQ7 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 135 ms