Protein–RNA interactions for Protein: Q9UKV0

HDAC9, Histone deacetylase 9, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9Q9UKV0 RPL23AP82-202ENST00000427528 469 ntBASIC3.83□□□□□ -1.8
HDAC9Q9UKV0 RPL7L1P10-201ENST00000427790 463 ntBASIC3.83□□□□□ -1.8
HDAC9Q9UKV0 CALM1P1-201ENST00000442082 433 ntBASIC3.83□□□□□ -1.8
HDAC9Q9UKV0 NEFMP1-201ENST00000443423 1006 ntBASIC3.83□□□□□ -1.8
HDAC9Q9UKV0 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.83□□□□□ -1.8
HDAC9Q9UKV0 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.83□□□□□ -1.8
HDAC9Q9UKV0 AL118520.1-201ENST00000450770 291 ntBASIC3.83□□□□□ -1.8
HDAC9Q9UKV0 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.83□□□□□ -1.8
HDAC9Q9UKV0 RPS20P20-201ENST00000460498 340 ntBASIC3.83□□□□□ -1.8
HDAC9Q9UKV0 CENPBD1P1-201ENST00000464061 469 ntBASIC3.83□□□□□ -1.8
HDAC9Q9UKV0 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.83□□□□□ -1.8
HDAC9Q9UKV0 AC074344.1-201ENST00000512823 224 ntBASIC3.83□□□□□ -1.8
HDAC9Q9UKV0 RNU4ATAC8P-201ENST00000516196 109 ntBASIC3.83□□□□□ -1.8
HDAC9Q9UKV0 AC009812.2-201ENST00000517657 457 ntBASIC3.83□□□□□ -1.8
HDAC9Q9UKV0 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC3.83□□□□□ -1.8
HDAC9Q9UKV0 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC3.83□□□□□ -1.8
HDAC9Q9UKV0 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC3.83□□□□□ -1.8
HDAC9Q9UKV0 MIR4703-201ENST00000577728 79 ntBASIC3.83□□□□□ -1.8
HDAC9Q9UKV0 MIR548S-201ENST00000581352 82 ntBASIC3.83□□□□□ -1.8
HDAC9Q9UKV0 AC060780.3-201ENST00000589464 80 ntBASIC3.83□□□□□ -1.8
HDAC9Q9UKV0 AL355073.2-201ENST00000612106 557 ntBASIC3.83□□□□□ -1.8
HDAC9Q9UKV0 AL365204.3-201ENST00000612448 685 ntBASIC3.83□□□□□ -1.8
HDAC9Q9UKV0 AC010338.1-201ENST00000621823 717 ntBASIC3.83□□□□□ -1.8
HDAC9Q9UKV0 AC024614.3-201ENST00000637860 256 ntBASIC3.83□□□□□ -1.8
HDAC9Q9UKV0 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
HDAC9Q9UKV0 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
HDAC9Q9UKV0 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
HDAC9Q9UKV0 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.83□□□□□ -1.8
HDAC9Q9UKV0 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
HDAC9Q9UKV0 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.82□□□□□ -1.8
HDAC9Q9UKV0 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.82□□□□□ -1.8
HDAC9Q9UKV0 API5P2-201ENST00000397055 1498 ntBASIC3.82□□□□□ -1.8
HDAC9Q9UKV0 AL354685.2-201ENST00000448218 1447 ntBASIC3.82□□□□□ -1.8
HDAC9Q9UKV0 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
HDAC9Q9UKV0 Y_RNA.576-201ENST00000384781 102 ntBASIC3.82□□□□□ -1.8
HDAC9Q9UKV0 RNU6-903P-201ENST00000391270 109 ntBASIC3.82□□□□□ -1.8
HDAC9Q9UKV0 AL139397.2-201ENST00000404529 772 ntBASIC3.82□□□□□ -1.8
HDAC9Q9UKV0 RNA5SP508-201ENST00000411327 119 ntBASIC3.82□□□□□ -1.8
HDAC9Q9UKV0 AL513331.1-201ENST00000411908 397 ntBASIC3.82□□□□□ -1.8
HDAC9Q9UKV0 OR9R1P-201ENST00000412200 877 ntBASIC3.82□□□□□ -1.8
HDAC9Q9UKV0 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC3.82□□□□□ -1.8
HDAC9Q9UKV0 AL109913.1-201ENST00000421173 514 ntBASIC3.82□□□□□ -1.8
HDAC9Q9UKV0 HSPE1P1-201ENST00000421494 318 ntBASIC3.82□□□□□ -1.8
HDAC9Q9UKV0 MRPS31P2-201ENST00000451581 518 ntBASIC3.82□□□□□ -1.8
HDAC9Q9UKV0 RPS4XP2-201ENST00000458402 793 ntBASIC3.82□□□□□ -1.8
HDAC9Q9UKV0 TRBV12-1-201ENST00000479785 344 ntBASIC3.82□□□□□ -1.8
HDAC9Q9UKV0 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.82□□□□□ -1.8
HDAC9Q9UKV0 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC3.82□□□□□ -1.8
HDAC9Q9UKV0 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC3.82□□□□□ -1.8
HDAC9Q9UKV0 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
HDAC9Q9UKV0 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.82□□□□□ -1.8
HDAC9Q9UKV0 HIF1AP1-201ENST00000553642 175 ntBASIC3.82□□□□□ -1.8
HDAC9Q9UKV0 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC3.82□□□□□ -1.8
HDAC9Q9UKV0 HMGB1P14-201ENST00000557424 591 ntBASIC3.82□□□□□ -1.8
HDAC9Q9UKV0 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC3.82□□□□□ -1.8
HDAC9Q9UKV0 AL138976.2-201ENST00000563989 694 ntBASIC3.82□□□□□ -1.8
HDAC9Q9UKV0 uc_338.25-201ENST00000613756 156 ntBASIC3.82□□□□□ -1.8
HDAC9Q9UKV0 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC3.82□□□□□ -1.8
HDAC9Q9UKV0 AC090132.2-201ENST00000615881 347 ntBASIC3.82□□□□□ -1.8
HDAC9Q9UKV0 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.82□□□□□ -1.8
HDAC9Q9UKV0 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC3.82□□□□□ -1.8
HDAC9Q9UKV0 AC027309.3-201ENST00000623419 351 ntBASIC3.82□□□□□ -1.8
HDAC9Q9UKV0 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.82□□□□□ -1.8
HDAC9Q9UKV0 TPTE2P4-201ENST00000258589 1605 ntBASIC3.81□□□□□ -1.8
HDAC9Q9UKV0 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
HDAC9Q9UKV0 RNU4-82P-201ENST00000362443 140 ntBASIC3.81□□□□□ -1.8
HDAC9Q9UKV0 RNU6-552P-201ENST00000362869 119 ntBASIC3.81□□□□□ -1.8
HDAC9Q9UKV0 SNORD15B-201ENST00000384714 146 ntBASIC3.81□□□□□ -1.8
HDAC9Q9UKV0 AL590383.1-201ENST00000428602 75 ntBASIC3.81□□□□□ -1.8
HDAC9Q9UKV0 AC022018.1-201ENST00000430685 241 ntBASIC3.81□□□□□ -1.8
HDAC9Q9UKV0 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC3.81□□□□□ -1.8
HDAC9Q9UKV0 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.81□□□□□ -1.8
HDAC9Q9UKV0 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.81□□□□□ -1.8
HDAC9Q9UKV0 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC3.81□□□□□ -1.8
HDAC9Q9UKV0 SCARNA15.2-201ENST00000516409 127 ntBASIC3.81□□□□□ -1.8
HDAC9Q9UKV0 RNA5SP503-201ENST00000517047 117 ntBASIC3.81□□□□□ -1.8
HDAC9Q9UKV0 RNU6-685P-201ENST00000517088 95 ntBASIC3.81□□□□□ -1.8
HDAC9Q9UKV0 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC3.81□□□□□ -1.8
HDAC9Q9UKV0 SUB1P1-201ENST00000524415 382 ntBASIC3.81□□□□□ -1.8
HDAC9Q9UKV0 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.81□□□□□ -1.8
HDAC9Q9UKV0 TGIF1P1-201ENST00000558095 802 ntBASIC3.81□□□□□ -1.8
HDAC9Q9UKV0 RPL23AP84-201ENST00000571193 464 ntBASIC3.81□□□□□ -1.8
HDAC9Q9UKV0 AC008521.1-201ENST00000587471 187 ntBASIC3.81□□□□□ -1.8
HDAC9Q9UKV0 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.81□□□□□ -1.8
HDAC9Q9UKV0 DISC2.1-201ENST00000612827 205 ntBASIC3.81□□□□□ -1.8
HDAC9Q9UKV0 SNORA50A-202ENST00000629536 136 ntBASIC3.81□□□□□ -1.8
HDAC9Q9UKV0 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
HDAC9Q9UKV0 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.81□□□□□ -1.8
HDAC9Q9UKV0 AL359693.1-201ENST00000614959 2407 ntBASIC3.81□□□□□ -1.8
HDAC9Q9UKV0 AC103710.2-202ENST00000641454 2853 ntBASIC3.81□□□□□ -1.8
HDAC9Q9UKV0 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
HDAC9Q9UKV0 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.8□□□□□ -1.8
HDAC9Q9UKV0 MIR184-201ENST00000384962 84 ntBASIC3.8□□□□□ -1.8
HDAC9Q9UKV0 RNU6-817P-201ENST00000391083 104 ntBASIC3.8□□□□□ -1.8
HDAC9Q9UKV0 RNA5SP293-201ENST00000410527 113 ntBASIC3.8□□□□□ -1.8
HDAC9Q9UKV0 RNA5SP229-201ENST00000410809 99 ntBASIC3.8□□□□□ -1.8
HDAC9Q9UKV0 RNU6-387P-201ENST00000411331 105 ntBASIC3.8□□□□□ -1.8
HDAC9Q9UKV0 CST9LP2-201ENST00000437612 320 ntBASIC3.8□□□□□ -1.8
HDAC9Q9UKV0 MTND1P18-201ENST00000448191 573 ntBASIC3.8□□□□□ -1.8
HDAC9Q9UKV0 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 116.9 ms