Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 Y_RNA.280-201ENST00000364765 112 ntBASIC0.71□□□□□ -2.3
SCN11AQ9UI33 RNU2-70P-201ENST00000410718 179 ntBASIC0.71□□□□□ -2.3
SCN11AQ9UI33 RPL37P10-201ENST00000412884 288 ntBASIC0.71□□□□□ -2.3
SCN11AQ9UI33 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC0.71□□□□□ -2.3
SCN11AQ9UI33 FGF7P5-201ENST00000441829 291 ntBASIC0.71□□□□□ -2.3
SCN11AQ9UI33 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC0.71□□□□□ -2.3
SCN11AQ9UI33 RPL30P6-201ENST00000475925 342 ntBASIC0.71□□□□□ -2.3
SCN11AQ9UI33 RNA5SP404-201ENST00000517118 132 ntBASIC0.71□□□□□ -2.3
SCN11AQ9UI33 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC0.71□□□□□ -2.3
SCN11AQ9UI33 OR5B19P-201ENST00000531766 928 ntBASIC0.71□□□□□ -2.3
SCN11AQ9UI33 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC0.71□□□□□ -2.3
SCN11AQ9UI33 MIR4422-201ENST00000581938 83 ntBASIC0.71□□□□□ -2.3
SCN11AQ9UI33 AC023932.2-201ENST00000603176 175 ntBASIC0.71□□□□□ -2.3
SCN11AQ9UI33 AC012213.4-201ENST00000606457 354 ntBASIC0.71□□□□□ -2.3
SCN11AQ9UI33 AP002826.1-201ENST00000608835 315 ntBASIC0.71□□□□□ -2.3
SCN11AQ9UI33 AC008443.7-201ENST00000622195 246 ntBASIC0.71□□□□□ -2.3
SCN11AQ9UI33 Z69720.2-201ENST00000624755 279 ntBASIC0.71□□□□□ -2.3
SCN11AQ9UI33 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC0.71□□□□□ -2.3
SCN11AQ9UI33 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC0.71□□□□□ -2.3
SCN11AQ9UI33 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC0.71□□□□□ -2.3
SCN11AQ9UI33 RNU6-272P-201ENST00000411028 104 ntBASIC0.7□□□□□ -2.3
SCN11AQ9UI33 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC0.7□□□□□ -2.3
SCN11AQ9UI33 RNU7-23P-201ENST00000459465 62 ntBASIC0.7□□□□□ -2.3
SCN11AQ9UI33 SNORA70.16-201ENST00000516390 95 ntBASIC0.7□□□□□ -2.3
SCN11AQ9UI33 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC0.7□□□□□ -2.3
SCN11AQ9UI33 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC0.7□□□□□ -2.3
SCN11AQ9UI33 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC0.7□□□□□ -2.3
SCN11AQ9UI33 MTND5P11-201ENST00000511037 1812 ntBASIC0.7□□□□□ -2.3
SCN11AQ9UI33 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC0.7□□□□□ -2.3
SCN11AQ9UI33 Y_RNA.471-201ENST00000384312 102 ntBASIC0.7□□□□□ -2.3
SCN11AQ9UI33 MIR30A-201ENST00000385092 71 ntBASIC0.7□□□□□ -2.3
SCN11AQ9UI33 MIR92A1-201ENST00000385233 78 ntBASIC0.7□□□□□ -2.3
SCN11AQ9UI33 AL356421.1-201ENST00000403255 413 ntBASIC0.7□□□□□ -2.3
SCN11AQ9UI33 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC0.7□□□□□ -2.3
SCN11AQ9UI33 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC0.7□□□□□ -2.3
SCN11AQ9UI33 AC099513.1-201ENST00000490423 301 ntBASIC0.7□□□□□ -2.3
SCN11AQ9UI33 HMGB1P35-201ENST00000503360 598 ntBASIC0.7□□□□□ -2.3
SCN11AQ9UI33 AF213884.2-201ENST00000510417 903 ntBASIC0.7□□□□□ -2.3
SCN11AQ9UI33 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC0.7□□□□□ -2.3
SCN11AQ9UI33 LRRC34P2-201ENST00000514850 553 ntBASIC0.7□□□□□ -2.3
SCN11AQ9UI33 OR8K4P-201ENST00000534608 872 ntBASIC0.7□□□□□ -2.3
SCN11AQ9UI33 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC0.7□□□□□ -2.3
SCN11AQ9UI33 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.69□□□□□ -2.3
SCN11AQ9UI33 RNU4-23P-201ENST00000362839 140 ntBASIC0.69□□□□□ -2.3
SCN11AQ9UI33 RNA5SP63-201ENST00000391225 112 ntBASIC0.69□□□□□ -2.3
SCN11AQ9UI33 MTCYBP16-201ENST00000509187 1129 ntBASIC0.69□□□□□ -2.3
SCN11AQ9UI33 MTCYBP27-201ENST00000555160 670 ntBASIC0.69□□□□□ -2.3
SCN11AQ9UI33 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC0.68□□□□□ -2.3
SCN11AQ9UI33 RNU6-222P-201ENST00000362438 107 ntBASIC0.68□□□□□ -2.3
SCN11AQ9UI33 RNA5SP240-201ENST00000365355 128 ntBASIC0.68□□□□□ -2.3
SCN11AQ9UI33 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC0.68□□□□□ -2.3
SCN11AQ9UI33 MRPS36P1-201ENST00000421291 307 ntBASIC0.68□□□□□ -2.3
SCN11AQ9UI33 HMGN2P9-201ENST00000476875 229 ntBASIC0.68□□□□□ -2.3
SCN11AQ9UI33 RPL31P60-201ENST00000478450 367 ntBASIC0.68□□□□□ -2.3
SCN11AQ9UI33 AC016065.2-201ENST00000514530 444 ntBASIC0.68□□□□□ -2.3
SCN11AQ9UI33 RNU6-1282P-201ENST00000516735 96 ntBASIC0.68□□□□□ -2.3
SCN11AQ9UI33 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC0.68□□□□□ -2.3
SCN11AQ9UI33 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC0.68□□□□□ -2.3
SCN11AQ9UI33 AC010809.3-201ENST00000621310 641 ntBASIC0.68□□□□□ -2.3
SCN11AQ9UI33 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC0.68□□□□□ -2.3
SCN11AQ9UI33 AL356585.4-201ENST00000623078 1229 ntBASIC0.68□□□□□ -2.3
SCN11AQ9UI33 MIR7157-201ENST00000635801 60 ntBASIC0.68□□□□□ -2.3
SCN11AQ9UI33 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC0.68□□□□□ -2.3
SCN11AQ9UI33 AGR3-202ENST00000402239 563 ntTSL 2 BASIC0.68□□□□□ -2.3
SCN11AQ9UI33 SNRPEP7-201ENST00000438350 220 ntBASIC0.68□□□□□ -2.3
SCN11AQ9UI33 RPL9P9-202ENST00000466501 579 ntBASIC0.68□□□□□ -2.3
SCN11AQ9UI33 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC0.68□□□□□ -2.3
SCN11AQ9UI33 MIR892C-201ENST00000516410 77 ntBASIC0.68□□□□□ -2.3
SCN11AQ9UI33 AL512506.2-201ENST00000624472 458 ntBASIC0.68□□□□□ -2.3
SCN11AQ9UI33 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC0.67□□□□□ -2.3
SCN11AQ9UI33 RNU6-418P-201ENST00000384035 107 ntBASIC0.67□□□□□ -2.3
SCN11AQ9UI33 AL606490.4-201ENST00000423117 127 ntBASIC0.67□□□□□ -2.3
SCN11AQ9UI33 AL354941.1-201ENST00000438600 464 ntBASIC0.67□□□□□ -2.3
SCN11AQ9UI33 ZNF736P11Y-201ENST00000442535 1213 ntBASIC0.67□□□□□ -2.3
SCN11AQ9UI33 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC0.67□□□□□ -2.3
SCN11AQ9UI33 AC114786.4-201ENST00000508771 728 ntBASIC0.67□□□□□ -2.3
SCN11AQ9UI33 AC114797.1-201ENST00000514003 728 ntBASIC0.67□□□□□ -2.3
SCN11AQ9UI33 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC0.67□□□□□ -2.3
SCN11AQ9UI33 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC0.67□□□□□ -2.3
SCN11AQ9UI33 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC0.67□□□□□ -2.3
SCN11AQ9UI33 CYP2C61P-201ENST00000604072 290 ntBASIC0.67□□□□□ -2.3
SCN11AQ9UI33 U4atac.1-201ENST00000618345 95 ntBASIC0.67□□□□□ -2.3
SCN11AQ9UI33 RNA5SP258-201ENST00000362750 119 ntBASIC0.66□□□□□ -2.3
SCN11AQ9UI33 PIGPP2-201ENST00000411569 458 ntBASIC0.66□□□□□ -2.3
SCN11AQ9UI33 OFD1P18Y-201ENST00000420889 959 ntBASIC0.66□□□□□ -2.3
SCN11AQ9UI33 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC0.66□□□□□ -2.3
SCN11AQ9UI33 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC0.66□□□□□ -2.3
SCN11AQ9UI33 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC0.66□□□□□ -2.3
SCN11AQ9UI33 AP001025.1-201ENST00000486139 332 ntBASIC0.66□□□□□ -2.3
SCN11AQ9UI33 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC0.66□□□□□ -2.3
SCN11AQ9UI33 RNA5SP137-201ENST00000516833 135 ntBASIC0.66□□□□□ -2.3
SCN11AQ9UI33 AC107953.1-201ENST00000522216 297 ntBASIC0.66□□□□□ -2.3
SCN11AQ9UI33 EEF1B2P4-201ENST00000551398 348 ntBASIC0.66□□□□□ -2.3
SCN11AQ9UI33 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC0.66□□□□□ -2.3
SCN11AQ9UI33 AP001269.3-201ENST00000588718 329 ntBASIC0.66□□□□□ -2.3
SCN11AQ9UI33 AC079791.1-201ENST00000605356 973 ntBASIC0.66□□□□□ -2.3
SCN11AQ9UI33 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC0.66□□□□□ -2.3
SCN11AQ9UI33 MIR6759-201ENST00000638110 65 ntBASIC0.66□□□□□ -2.3
SCN11AQ9UI33 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC0.65□□□□□ -2.3
SCN11AQ9UI33 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC0.65□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 117.7 ms