Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
NPC1L1Q9UHC9 AC109486.1-201ENST00000486833 374 ntBASIC2.7□□□□□ -1.98
NPC1L1Q9UHC9 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC2.7□□□□□ -1.98
NPC1L1Q9UHC9 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.7□□□□□ -1.98
NPC1L1Q9UHC9 RPPH1-2P-201ENST00000516688 293 ntBASIC2.7□□□□□ -1.98
NPC1L1Q9UHC9 RNU6-295P-201ENST00000516901 104 ntBASIC2.7□□□□□ -1.98
NPC1L1Q9UHC9 SUB1P1-201ENST00000524415 382 ntBASIC2.7□□□□□ -1.98
NPC1L1Q9UHC9 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC2.7□□□□□ -1.98
NPC1L1Q9UHC9 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC2.7□□□□□ -1.98
NPC1L1Q9UHC9 MIR3146-201ENST00000580367 79 ntBASIC2.7□□□□□ -1.98
NPC1L1Q9UHC9 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC2.7□□□□□ -1.98
NPC1L1Q9UHC9 AC103710.2-201ENST00000609912 942 ntBASIC2.7□□□□□ -1.98
NPC1L1Q9UHC9 AC087683.2-201ENST00000611384 326 ntBASIC2.7□□□□□ -1.98
NPC1L1Q9UHC9 AC079416.3-201ENST00000624479 549 ntBASIC2.7□□□□□ -1.98
NPC1L1Q9UHC9 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.69□□□□□ -1.98
NPC1L1Q9UHC9 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.69□□□□□ -1.98
NPC1L1Q9UHC9 RNU5F-7P-201ENST00000363696 115 ntBASIC2.69□□□□□ -1.98
NPC1L1Q9UHC9 Y_RNA.338-201ENST00000365320 114 ntBASIC2.69□□□□□ -1.98
NPC1L1Q9UHC9 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC2.69□□□□□ -1.98
NPC1L1Q9UHC9 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC2.69□□□□□ -1.98
NPC1L1Q9UHC9 AL365184.2-201ENST00000431139 435 ntBASIC2.69□□□□□ -1.98
NPC1L1Q9UHC9 AL512286.1-201ENST00000439244 400 ntBASIC2.69□□□□□ -1.98
NPC1L1Q9UHC9 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC2.69□□□□□ -1.98
NPC1L1Q9UHC9 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC2.69□□□□□ -1.98
NPC1L1Q9UHC9 SNORD97-201ENST00000459187 142 ntBASIC2.69□□□□□ -1.98
NPC1L1Q9UHC9 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
NPC1L1Q9UHC9 AC114786.4-201ENST00000508771 728 ntBASIC2.69□□□□□ -1.98
NPC1L1Q9UHC9 AC117522.2-201ENST00000510049 657 ntBASIC2.69□□□□□ -1.98
NPC1L1Q9UHC9 AC114797.1-201ENST00000514003 728 ntBASIC2.69□□□□□ -1.98
NPC1L1Q9UHC9 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC2.69□□□□□ -1.98
NPC1L1Q9UHC9 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
NPC1L1Q9UHC9 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
NPC1L1Q9UHC9 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC2.69□□□□□ -1.98
NPC1L1Q9UHC9 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.69□□□□□ -1.98
NPC1L1Q9UHC9 AC012435.1-202ENST00000568772 240 ntBASIC2.69□□□□□ -1.98
NPC1L1Q9UHC9 MIR4293-201ENST00000584305 78 ntBASIC2.69□□□□□ -1.98
NPC1L1Q9UHC9 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC2.69□□□□□ -1.98
NPC1L1Q9UHC9 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
NPC1L1Q9UHC9 AP000942.3-201ENST00000603702 160 ntBASIC2.69□□□□□ -1.98
NPC1L1Q9UHC9 AL670379.6-201ENST00000603753 252 ntBASIC2.69□□□□□ -1.98
NPC1L1Q9UHC9 AL670379.11-201ENST00000604059 253 ntBASIC2.69□□□□□ -1.98
NPC1L1Q9UHC9 AC008162.1-201ENST00000604718 254 ntBASIC2.69□□□□□ -1.98
NPC1L1Q9UHC9 AL670379.1-201ENST00000604752 252 ntBASIC2.69□□□□□ -1.98
NPC1L1Q9UHC9 AL670379.5-201ENST00000605253 252 ntBASIC2.69□□□□□ -1.98
NPC1L1Q9UHC9 AL670379.12-201ENST00000605291 253 ntBASIC2.69□□□□□ -1.98
NPC1L1Q9UHC9 AL670379.8-201ENST00000605353 252 ntBASIC2.69□□□□□ -1.98
NPC1L1Q9UHC9 AL670379.7-201ENST00000605823 252 ntBASIC2.69□□□□□ -1.98
NPC1L1Q9UHC9 AC018638.7-201ENST00000605836 1114 ntBASIC2.69□□□□□ -1.98
NPC1L1Q9UHC9 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC2.69□□□□□ -1.98
NPC1L1Q9UHC9 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
NPC1L1Q9UHC9 AC140725.3-201ENST00000616193 880 ntBASIC2.69□□□□□ -1.98
NPC1L1Q9UHC9 AC009159.2-201ENST00000617603 606 ntBASIC2.69□□□□□ -1.98
NPC1L1Q9UHC9 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC2.69□□□□□ -1.98
NPC1L1Q9UHC9 AP000770.2-201ENST00000623694 100 ntBASIC2.69□□□□□ -1.98
NPC1L1Q9UHC9 AP000553.5-201ENST00000641933 54 ntBASIC2.69□□□□□ -1.98
NPC1L1Q9UHC9 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
NPC1L1Q9UHC9 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
NPC1L1Q9UHC9 RNU6-809P-201ENST00000384461 107 ntBASIC2.68□□□□□ -1.98
NPC1L1Q9UHC9 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
NPC1L1Q9UHC9 SNORA26.9-201ENST00000391322 122 ntBASIC2.68□□□□□ -1.98
NPC1L1Q9UHC9 RPS20P2-201ENST00000402520 389 ntBASIC2.68□□□□□ -1.98
NPC1L1Q9UHC9 RNA5SP338-201ENST00000410495 85 ntBASIC2.68□□□□□ -1.98
NPC1L1Q9UHC9 HMGB3P2-201ENST00000411913 584 ntBASIC2.68□□□□□ -1.98
NPC1L1Q9UHC9 ZNF90P2-204ENST00000419323 1075 ntBASIC2.68□□□□□ -1.98
NPC1L1Q9UHC9 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC2.68□□□□□ -1.98
NPC1L1Q9UHC9 Z99497.1-201ENST00000421282 135 ntBASIC2.68□□□□□ -1.98
NPC1L1Q9UHC9 AC011233.1-201ENST00000422812 283 ntBASIC2.68□□□□□ -1.98
NPC1L1Q9UHC9 AL358075.3-201ENST00000426289 226 ntBASIC2.68□□□□□ -1.98
NPC1L1Q9UHC9 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC2.68□□□□□ -1.98
NPC1L1Q9UHC9 AC007677.1-201ENST00000445757 515 ntBASIC2.68□□□□□ -1.98
NPC1L1Q9UHC9 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC2.68□□□□□ -1.98
NPC1L1Q9UHC9 MRPS36P5-201ENST00000551909 298 ntBASIC2.68□□□□□ -1.98
NPC1L1Q9UHC9 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC2.68□□□□□ -1.98
NPC1L1Q9UHC9 AC121758.2-201ENST00000553271 193 ntBASIC2.68□□□□□ -1.98
NPC1L1Q9UHC9 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2.68□□□□□ -1.98
NPC1L1Q9UHC9 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC2.68□□□□□ -1.98
NPC1L1Q9UHC9 CLPTM1LP1-201ENST00000604519 484 ntBASIC2.68□□□□□ -1.98
NPC1L1Q9UHC9 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.68□□□□□ -1.98
NPC1L1Q9UHC9 Y_RNA.783-201ENST00000613546 102 ntBASIC2.68□□□□□ -1.98
NPC1L1Q9UHC9 uc_338.12-201ENST00000616344 181 ntBASIC2.68□□□□□ -1.98
NPC1L1Q9UHC9 AL136313.1-201ENST00000624804 202 ntBASIC2.68□□□□□ -1.98
NPC1L1Q9UHC9 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC2.68□□□□□ -1.98
NPC1L1Q9UHC9 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.68□□□□□ -1.98
NPC1L1Q9UHC9 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
NPC1L1Q9UHC9 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.68□□□□□ -1.98
NPC1L1Q9UHC9 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
NPC1L1Q9UHC9 AL445523.1-201ENST00000451184 1362 ntBASIC2.67□□□□□ -1.98
NPC1L1Q9UHC9 RNU6-1167P-201ENST00000363227 94 ntBASIC2.67□□□□□ -1.98
NPC1L1Q9UHC9 Y_RNA.140-201ENST00000363474 103 ntBASIC2.67□□□□□ -1.98
NPC1L1Q9UHC9 SNORA51.11-201ENST00000384442 131 ntBASIC2.67□□□□□ -1.98
NPC1L1Q9UHC9 MIR144-201ENST00000384886 86 ntBASIC2.67□□□□□ -1.98
NPC1L1Q9UHC9 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
NPC1L1Q9UHC9 SNORD115.1-201ENST00000391109 76 ntBASIC2.67□□□□□ -1.98
NPC1L1Q9UHC9 AL356057.2-201ENST00000403318 432 ntBASIC2.67□□□□□ -1.98
NPC1L1Q9UHC9 TEX41-202ENST00000414256 604 ntTSL 5 BASIC2.67□□□□□ -1.98
NPC1L1Q9UHC9 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.67□□□□□ -1.98
NPC1L1Q9UHC9 BTF3L4P3-201ENST00000418879 476 ntBASIC2.67□□□□□ -1.98
NPC1L1Q9UHC9 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC2.67□□□□□ -1.98
NPC1L1Q9UHC9 ELOCP14-201ENST00000428070 331 ntBASIC2.67□□□□□ -1.98
NPC1L1Q9UHC9 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.67□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 115.8 ms