Protein–RNA interactions for Protein: Q9UH17

APOBEC3B, DNA dC->dU-editing enzyme APOBEC-3B, humanhuman

Known RBP Predictions only

Length 382 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3BQ9UH17 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC2.41□□□□□ -2.02
APOBEC3BQ9UH17 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC2.41□□□□□ -2.02
APOBEC3BQ9UH17 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC2.41□□□□□ -2.02
APOBEC3BQ9UH17 MIR3124-201ENST00000582636 67 ntBASIC2.41□□□□□ -2.02
APOBEC3BQ9UH17 AL451064.1-201ENST00000607718 471 ntBASIC2.41□□□□□ -2.02
APOBEC3BQ9UH17 AC006566.1-201ENST00000608943 513 ntBASIC2.41□□□□□ -2.02
APOBEC3BQ9UH17 AP003399.1-201ENST00000637534 361 ntBASIC2.41□□□□□ -2.02
APOBEC3BQ9UH17 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
APOBEC3BQ9UH17 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
APOBEC3BQ9UH17 ZNF658B-202ENST00000615961 3375 ntBASIC2.4□□□□□ -2.02
APOBEC3BQ9UH17 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
APOBEC3BQ9UH17 RNA5SP456-201ENST00000364002 114 ntBASIC2.4□□□□□ -2.03
APOBEC3BQ9UH17 RNU6-188P-201ENST00000364207 107 ntBASIC2.4□□□□□ -2.03
APOBEC3BQ9UH17 RNU6-39P-201ENST00000384344 107 ntBASIC2.4□□□□□ -2.03
APOBEC3BQ9UH17 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
APOBEC3BQ9UH17 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
APOBEC3BQ9UH17 AL139397.2-201ENST00000404529 772 ntBASIC2.4□□□□□ -2.03
APOBEC3BQ9UH17 AC127391.1-201ENST00000411737 98 ntBASIC2.4□□□□□ -2.03
APOBEC3BQ9UH17 BX295541.1-201ENST00000417774 250 ntBASIC2.4□□□□□ -2.03
APOBEC3BQ9UH17 ELOCP4-201ENST00000420090 333 ntBASIC2.4□□□□□ -2.03
APOBEC3BQ9UH17 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.4□□□□□ -2.03
APOBEC3BQ9UH17 AC006366.1-201ENST00000422002 759 ntBASIC2.4□□□□□ -2.03
APOBEC3BQ9UH17 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC2.4□□□□□ -2.03
APOBEC3BQ9UH17 AL590383.1-201ENST00000428602 75 ntBASIC2.4□□□□□ -2.03
APOBEC3BQ9UH17 AL512844.2-201ENST00000433990 593 ntBASIC2.4□□□□□ -2.03
APOBEC3BQ9UH17 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC2.4□□□□□ -2.03
APOBEC3BQ9UH17 AL353706.1-201ENST00000436728 494 ntBASIC2.4□□□□□ -2.03
APOBEC3BQ9UH17 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.4□□□□□ -2.03
APOBEC3BQ9UH17 MTND1P29-201ENST00000448112 647 ntBASIC2.4□□□□□ -2.03
APOBEC3BQ9UH17 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC2.4□□□□□ -2.03
APOBEC3BQ9UH17 AC133134.1-201ENST00000466800 359 ntBASIC2.4□□□□□ -2.03
APOBEC3BQ9UH17 MTND4LP3-201ENST00000468320 276 ntBASIC2.4□□□□□ -2.03
APOBEC3BQ9UH17 MTND4P2-201ENST00000507767 1203 ntBASIC2.4□□□□□ -2.03
APOBEC3BQ9UH17 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC2.4□□□□□ -2.03
APOBEC3BQ9UH17 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
APOBEC3BQ9UH17 AC021269.2-201ENST00000532318 330 ntBASIC2.4□□□□□ -2.03
APOBEC3BQ9UH17 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC2.4□□□□□ -2.03
APOBEC3BQ9UH17 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC2.4□□□□□ -2.03
APOBEC3BQ9UH17 MIR3611-201ENST00000584484 83 ntBASIC2.4□□□□□ -2.03
APOBEC3BQ9UH17 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC2.4□□□□□ -2.03
APOBEC3BQ9UH17 AC064872.1-201ENST00000604823 1072 ntBASIC2.4□□□□□ -2.03
APOBEC3BQ9UH17 AC090578.1-201ENST00000604955 591 ntBASIC2.4□□□□□ -2.03
APOBEC3BQ9UH17 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC2.4□□□□□ -2.03
APOBEC3BQ9UH17 AL133173.2-201ENST00000614270 90 ntBASIC2.4□□□□□ -2.03
APOBEC3BQ9UH17 AL589994.2-201ENST00000621124 579 ntBASIC2.4□□□□□ -2.03
APOBEC3BQ9UH17 VPS8-228ENST00000628962 207 ntTSL 5 BASIC2.4□□□□□ -2.03
APOBEC3BQ9UH17 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
APOBEC3BQ9UH17 AC007785.2-201ENST00000598627 1916 ntBASIC2.4□□□□□ -2.03
APOBEC3BQ9UH17 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
APOBEC3BQ9UH17 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
APOBEC3BQ9UH17 MIR524-201ENST00000385242 87 ntBASIC2.39□□□□□ -2.03
APOBEC3BQ9UH17 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
APOBEC3BQ9UH17 DEFB108C-201ENST00000400154 252 ntBASIC2.39□□□□□ -2.03
APOBEC3BQ9UH17 AC007064.1-201ENST00000412238 351 ntBASIC2.39□□□□□ -2.03
APOBEC3BQ9UH17 AL135786.1-201ENST00000415892 214 ntBASIC2.39□□□□□ -2.03
APOBEC3BQ9UH17 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.39□□□□□ -2.03
APOBEC3BQ9UH17 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC2.39□□□□□ -2.03
APOBEC3BQ9UH17 RPL31P35-201ENST00000431058 377 ntBASIC2.39□□□□□ -2.03
APOBEC3BQ9UH17 ARPC3P1-201ENST00000437218 533 ntBASIC2.39□□□□□ -2.03
APOBEC3BQ9UH17 KATNBL1P3-201ENST00000443475 909 ntBASIC2.39□□□□□ -2.03
APOBEC3BQ9UH17 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC2.39□□□□□ -2.03
APOBEC3BQ9UH17 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC2.39□□□□□ -2.03
APOBEC3BQ9UH17 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC2.39□□□□□ -2.03
APOBEC3BQ9UH17 KLF3P2-201ENST00000465138 268 ntBASIC2.39□□□□□ -2.03
APOBEC3BQ9UH17 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.39□□□□□ -2.03
APOBEC3BQ9UH17 AC079140.3-201ENST00000511111 550 ntBASIC2.39□□□□□ -2.03
APOBEC3BQ9UH17 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC2.39□□□□□ -2.03
APOBEC3BQ9UH17 RNU1-41P-201ENST00000516161 162 ntBASIC2.39□□□□□ -2.03
APOBEC3BQ9UH17 RNU1-48P-201ENST00000516400 162 ntBASIC2.39□□□□□ -2.03
APOBEC3BQ9UH17 RNU6-928P-201ENST00000516876 104 ntBASIC2.39□□□□□ -2.03
APOBEC3BQ9UH17 AC022616.3-201ENST00000523940 148 ntBASIC2.39□□□□□ -2.03
APOBEC3BQ9UH17 AP006587.4-201ENST00000526053 529 ntBASIC2.39□□□□□ -2.03
APOBEC3BQ9UH17 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC2.39□□□□□ -2.03
APOBEC3BQ9UH17 OR4R1P-201ENST00000529879 463 ntBASIC2.39□□□□□ -2.03
APOBEC3BQ9UH17 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC2.39□□□□□ -2.03
APOBEC3BQ9UH17 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.39□□□□□ -2.03
APOBEC3BQ9UH17 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC2.39□□□□□ -2.03
APOBEC3BQ9UH17 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC2.39□□□□□ -2.03
APOBEC3BQ9UH17 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.39□□□□□ -2.03
APOBEC3BQ9UH17 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.39□□□□□ -2.03
APOBEC3BQ9UH17 MIR4528-201ENST00000577763 90 ntBASIC2.39□□□□□ -2.03
APOBEC3BQ9UH17 OR1M4P-201ENST00000589199 287 ntBASIC2.39□□□□□ -2.03
APOBEC3BQ9UH17 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.39□□□□□ -2.03
APOBEC3BQ9UH17 DLEU2_1.1-201ENST00000612089 120 ntBASIC2.39□□□□□ -2.03
APOBEC3BQ9UH17 AC008498.1-201ENST00000613012 531 ntBASIC2.39□□□□□ -2.03
APOBEC3BQ9UH17 DLEU2_1.2-201ENST00000614667 120 ntBASIC2.39□□□□□ -2.03
APOBEC3BQ9UH17 AC009509.4-201ENST00000619202 509 ntBASIC2.39□□□□□ -2.03
APOBEC3BQ9UH17 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC2.39□□□□□ -2.03
APOBEC3BQ9UH17 PISRT1-201ENST00000626175 531 ntBASIC2.39□□□□□ -2.03
APOBEC3BQ9UH17 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC2.39□□□□□ -2.03
APOBEC3BQ9UH17 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
APOBEC3BQ9UH17 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.39□□□□□ -2.03
APOBEC3BQ9UH17 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.38□□□□□ -2.03
APOBEC3BQ9UH17 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
APOBEC3BQ9UH17 SNORD56.2-201ENST00000363242 71 ntBASIC2.38□□□□□ -2.03
APOBEC3BQ9UH17 SNORD114-30-201ENST00000364448 72 ntBASIC2.38□□□□□ -2.03
APOBEC3BQ9UH17 RNU5E-6P-201ENST00000365574 115 ntBASIC2.38□□□□□ -2.03
APOBEC3BQ9UH17 SMIM11P1-201ENST00000369586 178 ntBASIC2.38□□□□□ -2.03
APOBEC3BQ9UH17 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC2.38□□□□□ -2.03
APOBEC3BQ9UH17 RNU6-741P-201ENST00000383889 107 ntBASIC2.38□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms