Protein–RNA interactions for Protein: Q9UBR4

LHX3, LIM/homeobox protein Lhx3, humanhuman

Predictions only

Length 397 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX3Q9UBR4 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC2.46□□□□□ -2.02
LHX3Q9UBR4 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC2.46□□□□□ -2.02
LHX3Q9UBR4 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC2.46□□□□□ -2.02
LHX3Q9UBR4 AC008088.1-201ENST00000580993 280 ntBASIC2.46□□□□□ -2.02
LHX3Q9UBR4 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.46□□□□□ -2.02
LHX3Q9UBR4 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.46□□□□□ -2.02
LHX3Q9UBR4 AC091304.9-201ENST00000612091 226 ntBASIC2.46□□□□□ -2.02
LHX3Q9UBR4 IGHVIII-44-202ENST00000636235 289 ntBASIC2.46□□□□□ -2.02
LHX3Q9UBR4 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
LHX3Q9UBR4 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.46□□□□□ -2.02
LHX3Q9UBR4 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.46□□□□□ -2.02
LHX3Q9UBR4 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
LHX3Q9UBR4 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.45□□□□□ -2.02
LHX3Q9UBR4 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
LHX3Q9UBR4 RNA5SP289-201ENST00000362332 137 ntBASIC2.45□□□□□ -2.02
LHX3Q9UBR4 U3.4-201ENST00000363352 213 ntBASIC2.45□□□□□ -2.02
LHX3Q9UBR4 SNORD116-8-201ENST00000384365 95 ntBASIC2.45□□□□□ -2.02
LHX3Q9UBR4 AC092809.3-201ENST00000415453 231 ntBASIC2.45□□□□□ -2.02
LHX3Q9UBR4 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC2.45□□□□□ -2.02
LHX3Q9UBR4 AC092427.1-202ENST00000430569 476 ntBASIC2.45□□□□□ -2.02
LHX3Q9UBR4 RPL23AP30-201ENST00000432419 501 ntBASIC2.45□□□□□ -2.02
LHX3Q9UBR4 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC2.45□□□□□ -2.02
LHX3Q9UBR4 RPL21P2-201ENST00000440049 481 ntBASIC2.45□□□□□ -2.02
LHX3Q9UBR4 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.45□□□□□ -2.02
LHX3Q9UBR4 RPL39P40-201ENST00000445481 146 ntBASIC2.45□□□□□ -2.02
LHX3Q9UBR4 AC104389.3-201ENST00000445629 235 ntBASIC2.45□□□□□ -2.02
LHX3Q9UBR4 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC2.45□□□□□ -2.02
LHX3Q9UBR4 FABP5P13-201ENST00000452144 328 ntBASIC2.45□□□□□ -2.02
LHX3Q9UBR4 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC2.45□□□□□ -2.02
LHX3Q9UBR4 AC234781.5-201ENST00000508429 271 ntBASIC2.45□□□□□ -2.02
LHX3Q9UBR4 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.45□□□□□ -2.02
LHX3Q9UBR4 RNU2-46P-201ENST00000517038 113 ntBASIC2.45□□□□□ -2.02
LHX3Q9UBR4 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2.45□□□□□ -2.02
LHX3Q9UBR4 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.45□□□□□ -2.02
LHX3Q9UBR4 HSPE1P20-201ENST00000538133 289 ntBASIC2.45□□□□□ -2.02
LHX3Q9UBR4 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC2.45□□□□□ -2.02
LHX3Q9UBR4 AC006199.1-201ENST00000548728 219 ntBASIC2.45□□□□□ -2.02
LHX3Q9UBR4 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC2.45□□□□□ -2.02
LHX3Q9UBR4 AC012414.6-201ENST00000568241 401 ntBASIC2.45□□□□□ -2.02
LHX3Q9UBR4 AC005261.5-201ENST00000596280 355 ntBASIC2.45□□□□□ -2.02
LHX3Q9UBR4 AC073544.2-201ENST00000601155 540 ntBASIC2.45□□□□□ -2.02
LHX3Q9UBR4 AC121247.2-201ENST00000604776 136 ntBASIC2.45□□□□□ -2.02
LHX3Q9UBR4 AC103810.6-201ENST00000606708 136 ntBASIC2.45□□□□□ -2.02
LHX3Q9UBR4 AL451064.1-201ENST00000607718 471 ntBASIC2.45□□□□□ -2.02
LHX3Q9UBR4 AL359198.2-201ENST00000611836 194 ntBASIC2.45□□□□□ -2.02
LHX3Q9UBR4 AC008250.2-201ENST00000615261 205 ntBASIC2.45□□□□□ -2.02
LHX3Q9UBR4 AL603839.4-201ENST00000624658 1005 ntBASIC2.45□□□□□ -2.02
LHX3Q9UBR4 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC2.45□□□□□ -2.02
LHX3Q9UBR4 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
LHX3Q9UBR4 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.44□□□□□ -2.02
LHX3Q9UBR4 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.44□□□□□ -2.02
LHX3Q9UBR4 AC004520.1-201ENST00000608362 1413 ntBASIC2.44□□□□□ -2.02
LHX3Q9UBR4 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.44□□□□□ -2.02
LHX3Q9UBR4 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.44□□□□□ -2.02
LHX3Q9UBR4 RNU6-461P-201ENST00000364195 107 ntBASIC2.44□□□□□ -2.02
LHX3Q9UBR4 SNORA4.3-201ENST00000365564 137 ntBASIC2.44□□□□□ -2.02
LHX3Q9UBR4 RNU6-39P-201ENST00000384344 107 ntBASIC2.44□□□□□ -2.02
LHX3Q9UBR4 RNY3P10-201ENST00000384764 102 ntBASIC2.44□□□□□ -2.02
LHX3Q9UBR4 SNORA26.7-201ENST00000391288 122 ntBASIC2.44□□□□□ -2.02
LHX3Q9UBR4 RPS3AP36-201ENST00000398190 775 ntBASIC2.44□□□□□ -2.02
LHX3Q9UBR4 RNU2-25P-201ENST00000411041 191 ntBASIC2.44□□□□□ -2.02
LHX3Q9UBR4 RPS3AP3-201ENST00000411933 242 ntBASIC2.44□□□□□ -2.02
LHX3Q9UBR4 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC2.44□□□□□ -2.02
LHX3Q9UBR4 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC2.44□□□□□ -2.02
LHX3Q9UBR4 USP9YP6-201ENST00000413550 854 ntBASIC2.44□□□□□ -2.02
LHX3Q9UBR4 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.44□□□□□ -2.02
LHX3Q9UBR4 AL109913.1-201ENST00000421173 514 ntBASIC2.44□□□□□ -2.02
LHX3Q9UBR4 SLC44A3-AS1-205ENST00000424505 612 ntBASIC2.44□□□□□ -2.02
LHX3Q9UBR4 AC098826.1-201ENST00000433943 471 ntBASIC2.44□□□□□ -2.02
LHX3Q9UBR4 RPS24P1-201ENST00000438550 371 ntBASIC2.44□□□□□ -2.02
LHX3Q9UBR4 RPS12P2-201ENST00000439728 269 ntBASIC2.44□□□□□ -2.02
LHX3Q9UBR4 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC2.44□□□□□ -2.02
LHX3Q9UBR4 snoU109.1-201ENST00000459339 135 ntBASIC2.44□□□□□ -2.02
LHX3Q9UBR4 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.44□□□□□ -2.02
LHX3Q9UBR4 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC2.44□□□□□ -2.02
LHX3Q9UBR4 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.44□□□□□ -2.02
LHX3Q9UBR4 RNU6-1183P-201ENST00000517054 60 ntBASIC2.44□□□□□ -2.02
LHX3Q9UBR4 RNU6-1315P-201ENST00000517187 99 ntBASIC2.44□□□□□ -2.02
LHX3Q9UBR4 RN7SKP40-201ENST00000517211 242 ntBASIC2.44□□□□□ -2.02
LHX3Q9UBR4 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC2.44□□□□□ -2.02
LHX3Q9UBR4 AC009902.1-201ENST00000519351 183 ntBASIC2.44□□□□□ -2.02
LHX3Q9UBR4 AC025755.1-201ENST00000521306 278 ntBASIC2.44□□□□□ -2.02
LHX3Q9UBR4 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC2.44□□□□□ -2.02
LHX3Q9UBR4 AL512310.1-201ENST00000548639 172 ntBASIC2.44□□□□□ -2.02
LHX3Q9UBR4 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC2.44□□□□□ -2.02
LHX3Q9UBR4 AL121821.2-201ENST00000556081 394 ntBASIC2.44□□□□□ -2.02
LHX3Q9UBR4 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC2.44□□□□□ -2.02
LHX3Q9UBR4 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC2.44□□□□□ -2.02
LHX3Q9UBR4 MIR4782-201ENST00000577987 79 ntBASIC2.44□□□□□ -2.02
LHX3Q9UBR4 MIR3167-201ENST00000579623 85 ntBASIC2.44□□□□□ -2.02
LHX3Q9UBR4 MIR3682-201ENST00000581338 84 ntBASIC2.44□□□□□ -2.02
LHX3Q9UBR4 AC090616.3-201ENST00000582184 217 ntBASIC2.44□□□□□ -2.02
LHX3Q9UBR4 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC2.44□□□□□ -2.02
LHX3Q9UBR4 AC005771.1-201ENST00000585581 349 ntBASIC2.44□□□□□ -2.02
LHX3Q9UBR4 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC2.44□□□□□ -2.02
LHX3Q9UBR4 CLIC4P2-201ENST00000601934 717 ntBASIC2.44□□□□□ -2.02
LHX3Q9UBR4 AL391813.1-201ENST00000603098 260 ntBASIC2.44□□□□□ -2.02
LHX3Q9UBR4 Z99497.2-201ENST00000603634 310 ntBASIC2.44□□□□□ -2.02
LHX3Q9UBR4 AC068276.1-201ENST00000605793 379 ntBASIC2.44□□□□□ -2.02
LHX3Q9UBR4 AL627309.6-201ENST00000606857 840 ntBASIC2.44□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms