Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.68□□□□□ -1.98
NDE1Q9NXR1 HMGB1P33-201ENST00000563485 527 ntBASIC2.68□□□□□ -1.98
NDE1Q9NXR1 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC2.68□□□□□ -1.98
NDE1Q9NXR1 MIR3922-201ENST00000585192 84 ntBASIC2.68□□□□□ -1.98
NDE1Q9NXR1 AC020895.1-201ENST00000595362 272 ntBASIC2.68□□□□□ -1.98
NDE1Q9NXR1 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC2.68□□□□□ -1.98
NDE1Q9NXR1 AC017083.3-201ENST00000609955 700 ntBASIC2.68□□□□□ -1.98
NDE1Q9NXR1 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC2.68□□□□□ -1.98
NDE1Q9NXR1 AC130324.3-201ENST00000614165 542 ntBASIC2.68□□□□□ -1.98
NDE1Q9NXR1 FRG1KP-201ENST00000623592 341 ntBASIC2.68□□□□□ -1.98
NDE1Q9NXR1 AC138915.1-201ENST00000565427 1685 ntBASIC2.68□□□□□ -1.98
NDE1Q9NXR1 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
NDE1Q9NXR1 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
NDE1Q9NXR1 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
NDE1Q9NXR1 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC2.68□□□□□ -1.98
NDE1Q9NXR1 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC2.67□□□□□ -1.98
NDE1Q9NXR1 RNU6-1120P-201ENST00000362988 108 ntBASIC2.67□□□□□ -1.98
NDE1Q9NXR1 RNU6-960P-201ENST00000364056 120 ntBASIC2.67□□□□□ -1.98
NDE1Q9NXR1 SNORA71.1-201ENST00000364523 117 ntBASIC2.67□□□□□ -1.98
NDE1Q9NXR1 RNU6-483P-201ENST00000384088 108 ntBASIC2.67□□□□□ -1.98
NDE1Q9NXR1 MIR325-201ENST00000385260 98 ntBASIC2.67□□□□□ -1.98
NDE1Q9NXR1 RNU6-1158P-201ENST00000391167 107 ntBASIC2.67□□□□□ -1.98
NDE1Q9NXR1 BTF3P7-201ENST00000407097 488 ntBASIC2.67□□□□□ -1.98
NDE1Q9NXR1 RNU6ATAC25P-201ENST00000408798 117 ntBASIC2.67□□□□□ -1.98
NDE1Q9NXR1 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC2.67□□□□□ -1.98
NDE1Q9NXR1 AL513331.1-201ENST00000411908 397 ntBASIC2.67□□□□□ -1.98
NDE1Q9NXR1 Z85995.1-201ENST00000415547 335 ntBASIC2.67□□□□□ -1.98
NDE1Q9NXR1 AL606489.2-201ENST00000433886 234 ntBASIC2.67□□□□□ -1.98
NDE1Q9NXR1 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC2.67□□□□□ -1.98
NDE1Q9NXR1 MTATP6P13-201ENST00000438531 667 ntBASIC2.67□□□□□ -1.98
NDE1Q9NXR1 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC2.67□□□□□ -1.98
NDE1Q9NXR1 Z75741.1-201ENST00000446793 314 ntBASIC2.67□□□□□ -1.98
NDE1Q9NXR1 FABP5P13-201ENST00000452144 328 ntBASIC2.67□□□□□ -1.98
NDE1Q9NXR1 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC2.67□□□□□ -1.98
NDE1Q9NXR1 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC2.67□□□□□ -1.98
NDE1Q9NXR1 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC2.67□□□□□ -1.98
NDE1Q9NXR1 RNU6-420P-201ENST00000458780 107 ntBASIC2.67□□□□□ -1.98
NDE1Q9NXR1 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC2.67□□□□□ -1.98
NDE1Q9NXR1 AC126389.1-201ENST00000477436 290 ntBASIC2.67□□□□□ -1.98
NDE1Q9NXR1 RBBP4P6-201ENST00000508098 202 ntBASIC2.67□□□□□ -1.98
NDE1Q9NXR1 AP001804.3-201ENST00000525146 880 ntBASIC2.67□□□□□ -1.98
NDE1Q9NXR1 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC2.67□□□□□ -1.98
NDE1Q9NXR1 AL359212.1-201ENST00000556608 614 ntBASIC2.67□□□□□ -1.98
NDE1Q9NXR1 ZNF519P2-201ENST00000557032 169 ntBASIC2.67□□□□□ -1.98
NDE1Q9NXR1 MIR3200-201ENST00000580767 85 ntBASIC2.67□□□□□ -1.98
NDE1Q9NXR1 MTATP6P3-201ENST00000581686 676 ntBASIC2.67□□□□□ -1.98
NDE1Q9NXR1 U6atac.1-201ENST00000616025 117 ntBASIC2.67□□□□□ -1.98
NDE1Q9NXR1 U4.5-201ENST00000617137 123 ntBASIC2.67□□□□□ -1.98
NDE1Q9NXR1 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC2.67□□□□□ -1.98
NDE1Q9NXR1 AC025034.2-201ENST00000623264 286 ntBASIC2.67□□□□□ -1.98
NDE1Q9NXR1 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.67□□□□□ -1.98
NDE1Q9NXR1 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.67□□□□□ -1.98
NDE1Q9NXR1 SDAD1P2-201ENST00000441308 2028 ntBASIC2.67□□□□□ -1.98
NDE1Q9NXR1 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
NDE1Q9NXR1 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC2.66□□□□□ -1.98
NDE1Q9NXR1 RNU6-179P-201ENST00000363350 107 ntBASIC2.66□□□□□ -1.98
NDE1Q9NXR1 Y_RNA.256-201ENST00000364594 104 ntBASIC2.66□□□□□ -1.98
NDE1Q9NXR1 RNU6-61P-201ENST00000365528 109 ntBASIC2.66□□□□□ -1.98
NDE1Q9NXR1 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC2.66□□□□□ -1.98
NDE1Q9NXR1 MIR490-201ENST00000384865 128 ntBASIC2.66□□□□□ -1.98
NDE1Q9NXR1 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
NDE1Q9NXR1 Z92545.1-201ENST00000411782 234 ntBASIC2.66□□□□□ -1.98
NDE1Q9NXR1 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC2.66□□□□□ -1.98
NDE1Q9NXR1 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC2.66□□□□□ -1.98
NDE1Q9NXR1 EIF1P1-201ENST00000421436 341 ntBASIC2.66□□□□□ -1.98
NDE1Q9NXR1 NDUFB4P7-201ENST00000423198 363 ntBASIC2.66□□□□□ -1.98
NDE1Q9NXR1 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC2.66□□□□□ -1.98
NDE1Q9NXR1 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC2.66□□□□□ -1.98
NDE1Q9NXR1 AL139415.2-201ENST00000431968 163 ntBASIC2.66□□□□□ -1.98
NDE1Q9NXR1 NDUFB4P6-201ENST00000436819 366 ntBASIC2.66□□□□□ -1.98
NDE1Q9NXR1 PRDX3P3-201ENST00000447765 522 ntBASIC2.66□□□□□ -1.98
NDE1Q9NXR1 AC003071.1-201ENST00000451219 789 ntBASIC2.66□□□□□ -1.98
NDE1Q9NXR1 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC2.66□□□□□ -1.98
NDE1Q9NXR1 NIPA2P5-201ENST00000452282 464 ntBASIC2.66□□□□□ -1.98
NDE1Q9NXR1 CACYBPP2-201ENST00000453625 678 ntBASIC2.66□□□□□ -1.98
NDE1Q9NXR1 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC2.66□□□□□ -1.98
NDE1Q9NXR1 AC022364.2-201ENST00000457963 554 ntBASIC2.66□□□□□ -1.98
NDE1Q9NXR1 SRIP1-201ENST00000489235 288 ntBASIC2.66□□□□□ -1.98
NDE1Q9NXR1 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC2.66□□□□□ -1.98
NDE1Q9NXR1 Y_RNA.693-201ENST00000516641 110 ntBASIC2.66□□□□□ -1.98
NDE1Q9NXR1 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC2.66□□□□□ -1.98
NDE1Q9NXR1 RPL23AP84-201ENST00000571193 464 ntBASIC2.66□□□□□ -1.98
NDE1Q9NXR1 AC007621.1-201ENST00000604544 437 ntBASIC2.66□□□□□ -1.98
NDE1Q9NXR1 NUTF2P8-201ENST00000604593 363 ntBASIC2.66□□□□□ -1.98
NDE1Q9NXR1 AL158032.1-201ENST00000605401 106 ntBASIC2.66□□□□□ -1.98
NDE1Q9NXR1 AP001330.5-201ENST00000607176 411 ntBASIC2.66□□□□□ -1.98
NDE1Q9NXR1 AC093788.1-201ENST00000609356 927 ntBASIC2.66□□□□□ -1.98
NDE1Q9NXR1 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC2.66□□□□□ -1.98
NDE1Q9NXR1 AC068944.2-201ENST00000610373 403 ntBASIC2.66□□□□□ -1.98
NDE1Q9NXR1 MIR3651-201ENST00000630427 90 ntBASIC2.66□□□□□ -1.98
NDE1Q9NXR1 AC008568.2-201ENST00000623862 2313 ntBASIC2.65□□□□□ -1.98
NDE1Q9NXR1 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.65□□□□□ -1.98
NDE1Q9NXR1 ZNF271P-202ENST00000465539 1970 ntBASIC2.65□□□□□ -1.98
NDE1Q9NXR1 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.98
NDE1Q9NXR1 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.65□□□□□ -1.98
NDE1Q9NXR1 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
NDE1Q9NXR1 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
NDE1Q9NXR1 RNU6-1180P-201ENST00000364935 107 ntBASIC2.65□□□□□ -1.99
NDE1Q9NXR1 RNU1-100P-201ENST00000365255 165 ntBASIC2.65□□□□□ -1.99
NDE1Q9NXR1 RNU4-48P-201ENST00000365559 182 ntBASIC2.65□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms