Protein–RNA interactions for Protein: Q9NUL7

DDX28, Probable ATP-dependent RNA helicase DDX28, humanhuman

Known RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX28Q9NUL7 SNORD19.2-201ENST00000516978 73 ntBASIC2.52□□□□□ -2.01
DDX28Q9NUL7 OR5B19P-201ENST00000531766 928 ntBASIC2.52□□□□□ -2.01
DDX28Q9NUL7 AC137800.2-201ENST00000574375 120 ntBASIC2.52□□□□□ -2.01
DDX28Q9NUL7 MIR1273C-201ENST00000578669 77 ntBASIC2.52□□□□□ -2.01
DDX28Q9NUL7 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC2.52□□□□□ -2.01
DDX28Q9NUL7 CLIC4P2-201ENST00000601934 717 ntBASIC2.52□□□□□ -2.01
DDX28Q9NUL7 AL590229.1-201ENST00000603497 542 ntBASIC2.52□□□□□ -2.01
DDX28Q9NUL7 AC025811.1-201ENST00000604312 472 ntBASIC2.52□□□□□ -2.01
DDX28Q9NUL7 MIR15A-201ENST00000607334 83 ntBASIC2.52□□□□□ -2.01
DDX28Q9NUL7 AC104237.2-201ENST00000612456 443 ntBASIC2.52□□□□□ -2.01
DDX28Q9NUL7 MIR3974-201ENST00000637126 96 ntBASIC2.52□□□□□ -2.01
DDX28Q9NUL7 U6.99-201ENST00000637524 83 ntBASIC2.52□□□□□ -2.01
DDX28Q9NUL7 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
DDX28Q9NUL7 ADAM3A-203ENST00000461344 2157 ntBASIC2.51□□□□□ -2.01
DDX28Q9NUL7 Z82209.1-201ENST00000422141 2135 ntBASIC2.51□□□□□ -2.01
DDX28Q9NUL7 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.51□□□□□ -2.01
DDX28Q9NUL7 RNU6-461P-201ENST00000364195 107 ntBASIC2.51□□□□□ -2.01
DDX28Q9NUL7 RNU6-169P-201ENST00000365336 107 ntBASIC2.51□□□□□ -2.01
DDX28Q9NUL7 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
DDX28Q9NUL7 EEF1A1P41-201ENST00000414667 207 ntBASIC2.51□□□□□ -2.01
DDX28Q9NUL7 AC080125.1-201ENST00000414888 684 ntBASIC2.51□□□□□ -2.01
DDX28Q9NUL7 AC092809.3-201ENST00000415453 231 ntBASIC2.51□□□□□ -2.01
DDX28Q9NUL7 AC114491.1-201ENST00000416095 246 ntBASIC2.51□□□□□ -2.01
DDX28Q9NUL7 AC090960.1-201ENST00000421072 306 ntBASIC2.51□□□□□ -2.01
DDX28Q9NUL7 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC2.51□□□□□ -2.01
DDX28Q9NUL7 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC2.51□□□□□ -2.01
DDX28Q9NUL7 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC2.51□□□□□ -2.01
DDX28Q9NUL7 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC2.51□□□□□ -2.01
DDX28Q9NUL7 AC098826.1-201ENST00000433943 471 ntBASIC2.51□□□□□ -2.01
DDX28Q9NUL7 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC2.51□□□□□ -2.01
DDX28Q9NUL7 AC073614.1-201ENST00000438690 650 ntBASIC2.51□□□□□ -2.01
DDX28Q9NUL7 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC2.51□□□□□ -2.01
DDX28Q9NUL7 FABP5P13-201ENST00000452144 328 ntBASIC2.51□□□□□ -2.01
DDX28Q9NUL7 AC107626.1-201ENST00000471084 183 ntBASIC2.51□□□□□ -2.01
DDX28Q9NUL7 AC117522.1-201ENST00000509821 380 ntBASIC2.51□□□□□ -2.01
DDX28Q9NUL7 HMGB3P3-201ENST00000510526 400 ntBASIC2.51□□□□□ -2.01
DDX28Q9NUL7 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC2.51□□□□□ -2.01
DDX28Q9NUL7 SNORA9.3-201ENST00000516383 129 ntBASIC2.51□□□□□ -2.01
DDX28Q9NUL7 RNU6-1183P-201ENST00000517054 60 ntBASIC2.51□□□□□ -2.01
DDX28Q9NUL7 RNU6-1315P-201ENST00000517187 99 ntBASIC2.51□□□□□ -2.01
DDX28Q9NUL7 SCARNA11.3-201ENST00000517276 130 ntBASIC2.51□□□□□ -2.01
DDX28Q9NUL7 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.51□□□□□ -2.01
DDX28Q9NUL7 AC009902.1-201ENST00000519351 183 ntBASIC2.51□□□□□ -2.01
DDX28Q9NUL7 AC025755.1-201ENST00000521306 278 ntBASIC2.51□□□□□ -2.01
DDX28Q9NUL7 AC087883.1-201ENST00000551882 391 ntBASIC2.51□□□□□ -2.01
DDX28Q9NUL7 NRBF2P1-201ENST00000587407 859 ntBASIC2.51□□□□□ -2.01
DDX28Q9NUL7 AC060766.3-201ENST00000591442 263 ntBASIC2.51□□□□□ -2.01
DDX28Q9NUL7 NRBF2P5-201ENST00000603087 788 ntBASIC2.51□□□□□ -2.01
DDX28Q9NUL7 AC007938.3-201ENST00000604965 623 ntBASIC2.51□□□□□ -2.01
DDX28Q9NUL7 AL359547.2-201ENST00000615810 418 ntBASIC2.51□□□□□ -2.01
DDX28Q9NUL7 AC110994.2-201ENST00000635481 492 ntBASIC2.51□□□□□ -2.01
DDX28Q9NUL7 TEX21P-201ENST00000447107 1476 ntBASIC2.51□□□□□ -2.01
DDX28Q9NUL7 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.51□□□□□ -2.01
DDX28Q9NUL7 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
DDX28Q9NUL7 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
DDX28Q9NUL7 OR5J1P-201ENST00000313544 939 ntBASIC2.5□□□□□ -2.01
DDX28Q9NUL7 RNU6-297P-201ENST00000384636 107 ntBASIC2.5□□□□□ -2.01
DDX28Q9NUL7 USP9YP6-201ENST00000413550 854 ntBASIC2.5□□□□□ -2.01
DDX28Q9NUL7 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.5□□□□□ -2.01
DDX28Q9NUL7 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC2.5□□□□□ -2.01
DDX28Q9NUL7 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC2.5□□□□□ -2.01
DDX28Q9NUL7 AL022238.1-201ENST00000442557 355 ntBASIC2.5□□□□□ -2.01
DDX28Q9NUL7 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
DDX28Q9NUL7 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC2.5□□□□□ -2.01
DDX28Q9NUL7 AC117522.3-201ENST00000507974 584 ntBASIC2.5□□□□□ -2.01
DDX28Q9NUL7 AC010486.3-201ENST00000511602 785 ntBASIC2.5□□□□□ -2.01
DDX28Q9NUL7 AC010486.1-201ENST00000511793 424 ntBASIC2.5□□□□□ -2.01
DDX28Q9NUL7 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.5□□□□□ -2.01
DDX28Q9NUL7 AC022447.1-201ENST00000515358 464 ntBASIC2.5□□□□□ -2.01
DDX28Q9NUL7 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC2.5□□□□□ -2.01
DDX28Q9NUL7 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC2.5□□□□□ -2.01
DDX28Q9NUL7 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC2.5□□□□□ -2.01
DDX28Q9NUL7 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC2.5□□□□□ -2.01
DDX28Q9NUL7 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.5□□□□□ -2.01
DDX28Q9NUL7 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC2.5□□□□□ -2.01
DDX28Q9NUL7 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC2.5□□□□□ -2.01
DDX28Q9NUL7 AC024619.4-201ENST00000580924 316 ntBASIC2.5□□□□□ -2.01
DDX28Q9NUL7 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.5□□□□□ -2.01
DDX28Q9NUL7 ELOCP29-201ENST00000588193 334 ntBASIC2.5□□□□□ -2.01
DDX28Q9NUL7 AL391813.1-201ENST00000603098 260 ntBASIC2.5□□□□□ -2.01
DDX28Q9NUL7 AC090578.1-201ENST00000604955 591 ntBASIC2.5□□□□□ -2.01
DDX28Q9NUL7 AC073114.1-201ENST00000612027 490 ntBASIC2.5□□□□□ -2.01
DDX28Q9NUL7 CU459211.1-201ENST00000635667 749 ntBASIC2.5□□□□□ -2.01
DDX28Q9NUL7 MIR7515-201ENST00000637837 67 ntBASIC2.5□□□□□ -2.01
DDX28Q9NUL7 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
DDX28Q9NUL7 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.5□□□□□ -2.01
DDX28Q9NUL7 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC2.5□□□□□ -2.01
DDX28Q9NUL7 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.5□□□□□ -2.01
DDX28Q9NUL7 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.49□□□□□ -2.01
DDX28Q9NUL7 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
DDX28Q9NUL7 MIR6073-201ENST00000352083 89 ntBASIC2.49□□□□□ -2.01
DDX28Q9NUL7 Y_RNA.22-201ENST00000362492 102 ntBASIC2.49□□□□□ -2.01
DDX28Q9NUL7 RNU6-641P-201ENST00000384006 107 ntBASIC2.49□□□□□ -2.01
DDX28Q9NUL7 MIR144-201ENST00000384886 86 ntBASIC2.49□□□□□ -2.01
DDX28Q9NUL7 AC009518.2-201ENST00000418056 731 ntBASIC2.49□□□□□ -2.01
DDX28Q9NUL7 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.49□□□□□ -2.01
DDX28Q9NUL7 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC2.49□□□□□ -2.01
DDX28Q9NUL7 ISCA1P6-201ENST00000427740 390 ntBASIC2.49□□□□□ -2.01
DDX28Q9NUL7 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC2.49□□□□□ -2.01
DDX28Q9NUL7 AL445687.1-201ENST00000439946 251 ntBASIC2.49□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 114.3 ms