Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.51□□□□□ -1.85
USP29Q9HBJ7 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC3.51□□□□□ -1.85
USP29Q9HBJ7 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.51□□□□□ -1.85
USP29Q9HBJ7 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.51□□□□□ -1.85
USP29Q9HBJ7 AC087045.1-201ENST00000605856 382 ntBASIC3.51□□□□□ -1.85
USP29Q9HBJ7 MIR15A-201ENST00000607334 83 ntBASIC3.51□□□□□ -1.85
USP29Q9HBJ7 AL132765.2-201ENST00000610812 351 ntBASIC3.51□□□□□ -1.85
USP29Q9HBJ7 AP003400.5-201ENST00000624827 617 ntBASIC3.51□□□□□ -1.85
USP29Q9HBJ7 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.51□□□□□ -1.85
USP29Q9HBJ7 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
USP29Q9HBJ7 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.51□□□□□ -1.85
USP29Q9HBJ7 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.51□□□□□ -1.85
USP29Q9HBJ7 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
USP29Q9HBJ7 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
USP29Q9HBJ7 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
USP29Q9HBJ7 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
USP29Q9HBJ7 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
USP29Q9HBJ7 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
USP29Q9HBJ7 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.5□□□□□ -1.85
USP29Q9HBJ7 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC3.5□□□□□ -1.85
USP29Q9HBJ7 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
USP29Q9HBJ7 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
USP29Q9HBJ7 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
USP29Q9HBJ7 Y_RNA.11-201ENST00000362375 109 ntBASIC3.5□□□□□ -1.85
USP29Q9HBJ7 Y_RNA.356-201ENST00000365475 113 ntBASIC3.5□□□□□ -1.85
USP29Q9HBJ7 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC3.5□□□□□ -1.85
USP29Q9HBJ7 SNORD17-201ENST00000390930 237 ntBASIC3.5□□□□□ -1.85
USP29Q9HBJ7 Z99755.1-201ENST00000414048 380 ntBASIC3.5□□□□□ -1.85
USP29Q9HBJ7 NDUFB4P5-201ENST00000415445 361 ntBASIC3.5□□□□□ -1.85
USP29Q9HBJ7 AC007390.1-201ENST00000415722 356 ntBASIC3.5□□□□□ -1.85
USP29Q9HBJ7 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC3.5□□□□□ -1.85
USP29Q9HBJ7 AL160275.3-201ENST00000423876 471 ntBASIC3.5□□□□□ -1.85
USP29Q9HBJ7 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.5□□□□□ -1.85
USP29Q9HBJ7 RPL23AP82-202ENST00000427528 469 ntBASIC3.5□□□□□ -1.85
USP29Q9HBJ7 AL591704.1-201ENST00000432574 275 ntBASIC3.5□□□□□ -1.85
USP29Q9HBJ7 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.5□□□□□ -1.85
USP29Q9HBJ7 CENPBD1P1-201ENST00000464061 469 ntBASIC3.5□□□□□ -1.85
USP29Q9HBJ7 AC012181.1-201ENST00000479895 423 ntBASIC3.5□□□□□ -1.85
USP29Q9HBJ7 RPS4XP22-201ENST00000480755 780 ntBASIC3.5□□□□□ -1.85
USP29Q9HBJ7 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
USP29Q9HBJ7 AC103851.1-201ENST00000506833 274 ntBASIC3.5□□□□□ -1.85
USP29Q9HBJ7 AL359273.1-201ENST00000510918 627 ntBASIC3.5□□□□□ -1.85
USP29Q9HBJ7 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.5□□□□□ -1.85
USP29Q9HBJ7 APOOP4-201ENST00000513530 597 ntBASIC3.5□□□□□ -1.85
USP29Q9HBJ7 RNA5SP471-201ENST00000516971 106 ntBASIC3.5□□□□□ -1.85
USP29Q9HBJ7 AC105029.1-201ENST00000520250 669 ntBASIC3.5□□□□□ -1.85
USP29Q9HBJ7 AP001804.3-201ENST00000525146 880 ntBASIC3.5□□□□□ -1.85
USP29Q9HBJ7 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.5□□□□□ -1.85
USP29Q9HBJ7 AC007458.1-201ENST00000542812 373 ntBASIC3.5□□□□□ -1.85
USP29Q9HBJ7 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC3.5□□□□□ -1.85
USP29Q9HBJ7 MIR4719-201ENST00000585233 84 ntBASIC3.5□□□□□ -1.85
USP29Q9HBJ7 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.5□□□□□ -1.85
USP29Q9HBJ7 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.5□□□□□ -1.85
USP29Q9HBJ7 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
USP29Q9HBJ7 MIR3651-201ENST00000630427 90 ntBASIC3.5□□□□□ -1.85
USP29Q9HBJ7 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
USP29Q9HBJ7 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC3.49□□□□□ -1.85
USP29Q9HBJ7 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
USP29Q9HBJ7 AC118273.1-201ENST00000525324 3006 ntBASIC3.49□□□□□ -1.85
USP29Q9HBJ7 AF127577.6-201ENST00000623352 2191 ntBASIC3.49□□□□□ -1.85
USP29Q9HBJ7 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
USP29Q9HBJ7 RNU1-75P-201ENST00000347264 129 ntBASIC3.49□□□□□ -1.85
USP29Q9HBJ7 Y_RNA.184-201ENST00000363884 108 ntBASIC3.49□□□□□ -1.85
USP29Q9HBJ7 RNU6-371P-201ENST00000364283 108 ntBASIC3.49□□□□□ -1.85
USP29Q9HBJ7 RNU6-805P-201ENST00000365643 106 ntBASIC3.49□□□□□ -1.85
USP29Q9HBJ7 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
USP29Q9HBJ7 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
USP29Q9HBJ7 Y_RNA.399-201ENST00000383955 105 ntBASIC3.49□□□□□ -1.85
USP29Q9HBJ7 Y_RNA.530-201ENST00000384587 101 ntBASIC3.49□□□□□ -1.85
USP29Q9HBJ7 MIR634-201ENST00000385208 97 ntBASIC3.49□□□□□ -1.85
USP29Q9HBJ7 SNORD70.1-201ENST00000391007 85 ntBASIC3.49□□□□□ -1.85
USP29Q9HBJ7 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.49□□□□□ -1.85
USP29Q9HBJ7 NDUFB4P4-201ENST00000404822 243 ntBASIC3.49□□□□□ -1.85
USP29Q9HBJ7 Z92545.1-201ENST00000411782 234 ntBASIC3.49□□□□□ -1.85
USP29Q9HBJ7 POLHP1-201ENST00000411806 470 ntBASIC3.49□□□□□ -1.85
USP29Q9HBJ7 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC3.49□□□□□ -1.85
USP29Q9HBJ7 BX682237.1-201ENST00000415016 335 ntBASIC3.49□□□□□ -1.85
USP29Q9HBJ7 AL356968.1-201ENST00000416622 474 ntBASIC3.49□□□□□ -1.85
USP29Q9HBJ7 USP9YP20-201ENST00000419224 558 ntBASIC3.49□□□□□ -1.85
USP29Q9HBJ7 HSPE1P1-201ENST00000421494 318 ntBASIC3.49□□□□□ -1.85
USP29Q9HBJ7 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC3.49□□□□□ -1.85
USP29Q9HBJ7 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC3.49□□□□□ -1.85
USP29Q9HBJ7 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC3.49□□□□□ -1.85
USP29Q9HBJ7 AL365400.1-201ENST00000431854 640 ntBASIC3.49□□□□□ -1.85
USP29Q9HBJ7 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC3.49□□□□□ -1.85
USP29Q9HBJ7 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC3.49□□□□□ -1.85
USP29Q9HBJ7 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.49□□□□□ -1.85
USP29Q9HBJ7 RPL21P10-201ENST00000463521 490 ntBASIC3.49□□□□□ -1.85
USP29Q9HBJ7 RPL7P5-201ENST00000471472 736 ntBASIC3.49□□□□□ -1.85
USP29Q9HBJ7 RNU6-914P-201ENST00000516749 109 ntBASIC3.49□□□□□ -1.85
USP29Q9HBJ7 IGKV2-26-201ENST00000518305 343 ntBASIC3.49□□□□□ -1.85
USP29Q9HBJ7 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC3.49□□□□□ -1.85
USP29Q9HBJ7 AC022690.1-201ENST00000526681 550 ntBASIC3.49□□□□□ -1.85
USP29Q9HBJ7 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.49□□□□□ -1.85
USP29Q9HBJ7 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC3.49□□□□□ -1.85
USP29Q9HBJ7 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC3.49□□□□□ -1.85
USP29Q9HBJ7 AC090115.3-201ENST00000553218 849 ntBASIC3.49□□□□□ -1.85
USP29Q9HBJ7 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC3.49□□□□□ -1.85
USP29Q9HBJ7 AC026464.5-201ENST00000562497 722 ntBASIC3.49□□□□□ -1.85
USP29Q9HBJ7 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.49□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 84.6 ms