Protein–RNA interactions for Protein: Q9H6T3

RPAP3, RNA polymerase II-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP3Q9H6T3 AL359212.1-201ENST00000556608 614 ntBASIC2.56□□□□□ -2
RPAP3Q9H6T3 AC009094.1-201ENST00000564443 426 ntBASIC2.56□□□□□ -2
RPAP3Q9H6T3 MIR3146-201ENST00000580367 79 ntBASIC2.56□□□□□ -2
RPAP3Q9H6T3 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC2.56□□□□□ -2
RPAP3Q9H6T3 AL161798.1-201ENST00000604630 131 ntBASIC2.56□□□□□ -2
RPAP3Q9H6T3 BNIP3P10-201ENST00000605360 577 ntBASIC2.56□□□□□ -2
RPAP3Q9H6T3 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC2.56□□□□□ -2
RPAP3Q9H6T3 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC2.56□□□□□ -2
RPAP3Q9H6T3 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC2.56□□□□□ -2
RPAP3Q9H6T3 MTND5P29-201ENST00000458676 1807 ntBASIC2.56□□□□□ -2
RPAP3Q9H6T3 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
RPAP3Q9H6T3 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC2.55□□□□□ -2
RPAP3Q9H6T3 RNU6-500P-201ENST00000362349 107 ntBASIC2.55□□□□□ -2
RPAP3Q9H6T3 RNU6-288P-201ENST00000363690 104 ntBASIC2.55□□□□□ -2
RPAP3Q9H6T3 U8.8-201ENST00000365399 135 ntBASIC2.55□□□□□ -2
RPAP3Q9H6T3 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
RPAP3Q9H6T3 GSTA9P-201ENST00000406231 611 ntBASIC2.55□□□□□ -2
RPAP3Q9H6T3 AL355497.1-201ENST00000406262 551 ntBASIC2.55□□□□□ -2
RPAP3Q9H6T3 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC2.55□□□□□ -2
RPAP3Q9H6T3 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
RPAP3Q9H6T3 AL353777.1-201ENST00000425552 326 ntBASIC2.55□□□□□ -2
RPAP3Q9H6T3 TRIM60P10Y-201ENST00000425589 751 ntBASIC2.55□□□□□ -2
RPAP3Q9H6T3 SKA2P1-201ENST00000425592 390 ntBASIC2.55□□□□□ -2
RPAP3Q9H6T3 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC2.55□□□□□ -2
RPAP3Q9H6T3 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC2.55□□□□□ -2
RPAP3Q9H6T3 RPS15AP5-201ENST00000436276 388 ntBASIC2.55□□□□□ -2
RPAP3Q9H6T3 AC118469.1-201ENST00000442943 488 ntBASIC2.55□□□□□ -2
RPAP3Q9H6T3 ZNF114P1-201ENST00000453500 292 ntBASIC2.55□□□□□ -2
RPAP3Q9H6T3 Y_RNA.638-201ENST00000459374 113 ntBASIC2.55□□□□□ -2
RPAP3Q9H6T3 AC139453.3-201ENST00000493276 369 ntBASIC2.55□□□□□ -2
RPAP3Q9H6T3 MTCYBP35-201ENST00000503630 1137 ntBASIC2.55□□□□□ -2
RPAP3Q9H6T3 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC2.55□□□□□ -2
RPAP3Q9H6T3 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC2.55□□□□□ -2
RPAP3Q9H6T3 SNORA31.3-201ENST00000516029 96 ntBASIC2.55□□□□□ -2
RPAP3Q9H6T3 RNA5SP402-201ENST00000517148 110 ntBASIC2.55□□□□□ -2
RPAP3Q9H6T3 AP003467.2-201ENST00000520175 319 ntBASIC2.55□□□□□ -2
RPAP3Q9H6T3 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC2.55□□□□□ -2
RPAP3Q9H6T3 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
RPAP3Q9H6T3 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC2.55□□□□□ -2
RPAP3Q9H6T3 AC015712.3-201ENST00000559380 164 ntBASIC2.55□□□□□ -2
RPAP3Q9H6T3 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.55□□□□□ -2
RPAP3Q9H6T3 AC091489.2-201ENST00000566263 604 ntBASIC2.55□□□□□ -2
RPAP3Q9H6T3 MTATP6P24-201ENST00000576835 677 ntBASIC2.55□□□□□ -2
RPAP3Q9H6T3 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC2.55□□□□□ -2
RPAP3Q9H6T3 AC006338.1-201ENST00000618453 749 ntBASIC2.55□□□□□ -2
RPAP3Q9H6T3 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.55□□□□□ -2
RPAP3Q9H6T3 AC012640.5-201ENST00000623897 319 ntBASIC2.55□□□□□ -2
RPAP3Q9H6T3 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC2.55□□□□□ -2
RPAP3Q9H6T3 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.55□□□□□ -2
RPAP3Q9H6T3 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC2.55□□□□□ -2
RPAP3Q9H6T3 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
RPAP3Q9H6T3 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
RPAP3Q9H6T3 AC080100.1-201ENST00000624239 5356 ntBASIC2.55□□□□□ -2
RPAP3Q9H6T3 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
RPAP3Q9H6T3 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
RPAP3Q9H6T3 RNU6-501P-201ENST00000364072 100 ntBASIC2.54□□□□□ -2
RPAP3Q9H6T3 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
RPAP3Q9H6T3 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC2.54□□□□□ -2
RPAP3Q9H6T3 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC2.54□□□□□ -2
RPAP3Q9H6T3 ELOCP17-201ENST00000414751 326 ntBASIC2.54□□□□□ -2
RPAP3Q9H6T3 ZNF90P2-204ENST00000419323 1075 ntBASIC2.54□□□□□ -2
RPAP3Q9H6T3 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC2.54□□□□□ -2
RPAP3Q9H6T3 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC2.54□□□□□ -2
RPAP3Q9H6T3 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC2.54□□□□□ -2
RPAP3Q9H6T3 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC2.54□□□□□ -2
RPAP3Q9H6T3 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC2.54□□□□□ -2
RPAP3Q9H6T3 AC107626.1-201ENST00000471084 183 ntBASIC2.54□□□□□ -2
RPAP3Q9H6T3 TRBV1-201ENST00000476502 284 ntBASIC2.54□□□□□ -2
RPAP3Q9H6T3 HSPE1P18-201ENST00000517602 280 ntBASIC2.54□□□□□ -2
RPAP3Q9H6T3 AC107934.1-201ENST00000522215 217 ntBASIC2.54□□□□□ -2
RPAP3Q9H6T3 AP000889.2-201ENST00000532684 490 ntBASIC2.54□□□□□ -2
RPAP3Q9H6T3 ARL2BPP2-201ENST00000550907 489 ntBASIC2.54□□□□□ -2
RPAP3Q9H6T3 ZNF519P3-201ENST00000557158 1032 ntBASIC2.54□□□□□ -2
RPAP3Q9H6T3 PCMTD1P2-201ENST00000565017 355 ntBASIC2.54□□□□□ -2
RPAP3Q9H6T3 DEFB122-202ENST00000569013 197 ntBASIC2.54□□□□□ -2
RPAP3Q9H6T3 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC2.54□□□□□ -2
RPAP3Q9H6T3 MTCYBP22-201ENST00000603788 447 ntBASIC2.54□□□□□ -2
RPAP3Q9H6T3 AL645944.1-201ENST00000603857 493 ntBASIC2.54□□□□□ -2
RPAP3Q9H6T3 AC025811.1-201ENST00000604312 472 ntBASIC2.54□□□□□ -2
RPAP3Q9H6T3 AC025754.2-201ENST00000606491 432 ntBASIC2.54□□□□□ -2
RPAP3Q9H6T3 AC087683.2-201ENST00000611384 326 ntBASIC2.54□□□□□ -2
RPAP3Q9H6T3 AC013562.2-201ENST00000611632 603 ntBASIC2.54□□□□□ -2
RPAP3Q9H6T3 AC009159.2-201ENST00000617603 606 ntBASIC2.54□□□□□ -2
RPAP3Q9H6T3 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.54□□□□□ -2
RPAP3Q9H6T3 AL160394.1-201ENST00000624765 724 ntBASIC2.54□□□□□ -2
RPAP3Q9H6T3 AC093591.3-201ENST00000634516 308 ntBASIC2.54□□□□□ -2
RPAP3Q9H6T3 MIR219B-201ENST00000637023 88 ntBASIC2.54□□□□□ -2
RPAP3Q9H6T3 AC010329.5-201ENST00000623497 2174 ntBASIC2.54□□□□□ -2
RPAP3Q9H6T3 MTND4P27-201ENST00000450813 1354 ntBASIC2.53□□□□□ -2
RPAP3Q9H6T3 MIR6073-201ENST00000352083 89 ntBASIC2.53□□□□□ -2
RPAP3Q9H6T3 RNU6-14P-201ENST00000384630 106 ntBASIC2.53□□□□□ -2
RPAP3Q9H6T3 RNA5SP181-201ENST00000410246 98 ntBASIC2.53□□□□□ -2
RPAP3Q9H6T3 RNU2-36P-201ENST00000410361 191 ntBASIC2.53□□□□□ -2
RPAP3Q9H6T3 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC2.53□□□□□ -2
RPAP3Q9H6T3 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.53□□□□□ -2
RPAP3Q9H6T3 AL365184.2-201ENST00000431139 435 ntBASIC2.53□□□□□ -2
RPAP3Q9H6T3 GPM6BP2-201ENST00000432046 144 ntBASIC2.53□□□□□ -2
RPAP3Q9H6T3 RPL36AP53-201ENST00000432891 316 ntBASIC2.53□□□□□ -2
RPAP3Q9H6T3 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC2.53□□□□□ -2
RPAP3Q9H6T3 GPM6BP1-201ENST00000446387 144 ntBASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms