Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
NXF3Q9H4D5 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
NXF3Q9H4D5 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC2.3□□□□□ -2.04
NXF3Q9H4D5 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.3□□□□□ -2.04
NXF3Q9H4D5 AF131216.2-201ENST00000512316 564 ntBASIC2.3□□□□□ -2.04
NXF3Q9H4D5 FABP5P5-201ENST00000515537 406 ntBASIC2.3□□□□□ -2.04
NXF3Q9H4D5 AC022878.1-201ENST00000530684 149 ntBASIC2.3□□□□□ -2.04
NXF3Q9H4D5 ZNF519P3-201ENST00000557158 1032 ntBASIC2.3□□□□□ -2.04
NXF3Q9H4D5 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC2.3□□□□□ -2.04
NXF3Q9H4D5 AC068135.2-201ENST00000569293 1028 ntBASIC2.3□□□□□ -2.04
NXF3Q9H4D5 MIR3117-201ENST00000584034 78 ntBASIC2.3□□□□□ -2.04
NXF3Q9H4D5 AC110760.3-201ENST00000598794 467 ntBASIC2.3□□□□□ -2.04
NXF3Q9H4D5 AL590229.1-201ENST00000603497 542 ntBASIC2.3□□□□□ -2.04
NXF3Q9H4D5 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.3□□□□□ -2.04
NXF3Q9H4D5 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
NXF3Q9H4D5 AC092140.2-201ENST00000618027 521 ntBASIC2.3□□□□□ -2.04
NXF3Q9H4D5 AC009878.1-201ENST00000621819 340 ntBASIC2.3□□□□□ -2.04
NXF3Q9H4D5 CU459211.1-201ENST00000635667 749 ntBASIC2.3□□□□□ -2.04
NXF3Q9H4D5 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
NXF3Q9H4D5 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC2.3□□□□□ -2.04
NXF3Q9H4D5 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.3□□□□□ -2.04
NXF3Q9H4D5 AL137003.2-201ENST00000606924 2538 ntBASIC2.3□□□□□ -2.04
NXF3Q9H4D5 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
NXF3Q9H4D5 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
NXF3Q9H4D5 RNU4-91P-201ENST00000364778 135 ntBASIC2.29□□□□□ -2.04
NXF3Q9H4D5 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC2.29□□□□□ -2.04
NXF3Q9H4D5 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC2.29□□□□□ -2.04
NXF3Q9H4D5 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC2.29□□□□□ -2.04
NXF3Q9H4D5 MIR504-201ENST00000385065 83 ntBASIC2.29□□□□□ -2.04
NXF3Q9H4D5 TXNP7-201ENST00000406296 293 ntBASIC2.29□□□□□ -2.04
NXF3Q9H4D5 RNU2-33P-201ENST00000410344 192 ntBASIC2.29□□□□□ -2.04
NXF3Q9H4D5 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
NXF3Q9H4D5 USP9YP13-201ENST00000417797 480 ntBASIC2.29□□□□□ -2.04
NXF3Q9H4D5 AL356583.2-201ENST00000426536 280 ntBASIC2.29□□□□□ -2.04
NXF3Q9H4D5 ZNF863P-201ENST00000426746 417 ntBASIC2.29□□□□□ -2.04
NXF3Q9H4D5 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC2.29□□□□□ -2.04
NXF3Q9H4D5 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC2.29□□□□□ -2.04
NXF3Q9H4D5 TIMM9P1-201ENST00000436122 256 ntBASIC2.29□□□□□ -2.04
NXF3Q9H4D5 RPL22P17-201ENST00000438729 315 ntBASIC2.29□□□□□ -2.04
NXF3Q9H4D5 AC005094.1-201ENST00000440420 368 ntBASIC2.29□□□□□ -2.04
NXF3Q9H4D5 MTATP6P26-201ENST00000445926 662 ntBASIC2.29□□□□□ -2.04
NXF3Q9H4D5 Z83846.1-201ENST00000446798 265 ntBASIC2.29□□□□□ -2.04
NXF3Q9H4D5 ELOCP30-201ENST00000447108 299 ntBASIC2.29□□□□□ -2.04
NXF3Q9H4D5 RPS15AP27-201ENST00000449183 343 ntBASIC2.29□□□□□ -2.04
NXF3Q9H4D5 AC011753.1-201ENST00000451001 220 ntBASIC2.29□□□□□ -2.04
NXF3Q9H4D5 AC233279.1-201ENST00000455300 423 ntBASIC2.29□□□□□ -2.04
NXF3Q9H4D5 SNRPFP4-201ENST00000456366 242 ntBASIC2.29□□□□□ -2.04
NXF3Q9H4D5 AC108059.3-201ENST00000456388 214 ntBASIC2.29□□□□□ -2.04
NXF3Q9H4D5 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC2.29□□□□□ -2.04
NXF3Q9H4D5 MRPL42P6-201ENST00000486397 371 ntBASIC2.29□□□□□ -2.04
NXF3Q9H4D5 AC138853.1-201ENST00000503549 823 ntBASIC2.29□□□□□ -2.04
NXF3Q9H4D5 AC114786.4-201ENST00000508771 728 ntBASIC2.29□□□□□ -2.04
NXF3Q9H4D5 HMGB3P3-201ENST00000510526 400 ntBASIC2.29□□□□□ -2.04
NXF3Q9H4D5 AC114797.1-201ENST00000514003 728 ntBASIC2.29□□□□□ -2.04
NXF3Q9H4D5 SNORA31.18-201ENST00000517043 134 ntBASIC2.29□□□□□ -2.04
NXF3Q9H4D5 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.29□□□□□ -2.04
NXF3Q9H4D5 AC022616.6-201ENST00000520479 119 ntBASIC2.29□□□□□ -2.04
NXF3Q9H4D5 AC022634.1-201ENST00000520765 532 ntBASIC2.29□□□□□ -2.04
NXF3Q9H4D5 DEFB108A-201ENST00000530110 222 ntBASIC2.29□□□□□ -2.04
NXF3Q9H4D5 AC123904.2-201ENST00000548059 300 ntBASIC2.29□□□□□ -2.04
NXF3Q9H4D5 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.29□□□□□ -2.04
NXF3Q9H4D5 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC2.29□□□□□ -2.04
NXF3Q9H4D5 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC2.29□□□□□ -2.04
NXF3Q9H4D5 MIR3146-201ENST00000580367 79 ntBASIC2.29□□□□□ -2.04
NXF3Q9H4D5 KC877982.1-201ENST00000602313 470 ntBASIC2.29□□□□□ -2.04
NXF3Q9H4D5 Z94722.1-201ENST00000604328 474 ntBASIC2.29□□□□□ -2.04
NXF3Q9H4D5 AL359999.1-201ENST00000604513 294 ntBASIC2.29□□□□□ -2.04
NXF3Q9H4D5 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC2.29□□□□□ -2.04
NXF3Q9H4D5 AC010133.1-201ENST00000615809 842 ntBASIC2.29□□□□□ -2.04
NXF3Q9H4D5 MIR7843-201ENST00000622274 79 ntBASIC2.29□□□□□ -2.04
NXF3Q9H4D5 AC025048.6-202ENST00000627667 438 ntBASIC2.29□□□□□ -2.04
NXF3Q9H4D5 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
NXF3Q9H4D5 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.29□□□□□ -2.04
NXF3Q9H4D5 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
NXF3Q9H4D5 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.28□□□□□ -2.04
NXF3Q9H4D5 RNU2-2P-201ENST00000410396 191 ntBASIC2.28□□□□□ -2.04
NXF3Q9H4D5 AL139156.1-201ENST00000412785 841 ntBASIC2.28□□□□□ -2.04
NXF3Q9H4D5 RPL21P24-201ENST00000413752 448 ntBASIC2.28□□□□□ -2.04
NXF3Q9H4D5 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
NXF3Q9H4D5 MTND2P4-201ENST00000445034 1004 ntBASIC2.28□□□□□ -2.04
NXF3Q9H4D5 USP9YP12-201ENST00000450481 570 ntBASIC2.28□□□□□ -2.04
NXF3Q9H4D5 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC2.28□□□□□ -2.04
NXF3Q9H4D5 AC008481.1-201ENST00000463278 396 ntBASIC2.28□□□□□ -2.04
NXF3Q9H4D5 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
NXF3Q9H4D5 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.28□□□□□ -2.04
NXF3Q9H4D5 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.28□□□□□ -2.04
NXF3Q9H4D5 RNA5SP82-201ENST00000516707 92 ntBASIC2.28□□□□□ -2.04
NXF3Q9H4D5 AC060788.1-201ENST00000521318 469 ntBASIC2.28□□□□□ -2.04
NXF3Q9H4D5 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC2.28□□□□□ -2.04
NXF3Q9H4D5 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC2.28□□□□□ -2.04
NXF3Q9H4D5 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.28□□□□□ -2.04
NXF3Q9H4D5 AC005951.2-201ENST00000576282 495 ntBASIC2.28□□□□□ -2.04
NXF3Q9H4D5 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC2.28□□□□□ -2.04
NXF3Q9H4D5 MIR3616-201ENST00000584070 92 ntBASIC2.28□□□□□ -2.04
NXF3Q9H4D5 MIR4658-201ENST00000584344 65 ntBASIC2.28□□□□□ -2.04
NXF3Q9H4D5 AC112191.3-201ENST00000604371 277 ntBASIC2.28□□□□□ -2.04
NXF3Q9H4D5 AC068276.1-201ENST00000605793 379 ntBASIC2.28□□□□□ -2.04
NXF3Q9H4D5 AL391813.2-201ENST00000609113 322 ntBASIC2.28□□□□□ -2.04
NXF3Q9H4D5 AC108747.1-201ENST00000609508 535 ntBASIC2.28□□□□□ -2.04
NXF3Q9H4D5 AC103710.1-201ENST00000610003 901 ntBASIC2.28□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 125.9 ms