Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 Y_RNA.515-201ENST00000384535 112 ntBASIC4.03□□□□□ -1.76
VPS11Q9H270 RNU6-1127P-201ENST00000384580 107 ntBASIC4.03□□□□□ -1.76
VPS11Q9H270 MIR1251-201ENST00000408552 70 ntBASIC4.03□□□□□ -1.76
VPS11Q9H270 MIR1252-201ENST00000408861 65 ntBASIC4.03□□□□□ -1.76
VPS11Q9H270 MTCO3P19-201ENST00000415864 321 ntBASIC4.03□□□□□ -1.76
VPS11Q9H270 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC4.03□□□□□ -1.76
VPS11Q9H270 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC4.03□□□□□ -1.76
VPS11Q9H270 AC011816.1-201ENST00000441346 546 ntBASIC4.03□□□□□ -1.76
VPS11Q9H270 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.03□□□□□ -1.76
VPS11Q9H270 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
VPS11Q9H270 RPS15AP27-201ENST00000449183 343 ntBASIC4.03□□□□□ -1.76
VPS11Q9H270 CHEK2P4-201ENST00000450340 246 ntBASIC4.03□□□□□ -1.76
VPS11Q9H270 MTND4LP30-201ENST00000454092 297 ntBASIC4.03□□□□□ -1.76
VPS11Q9H270 AC116533.1-201ENST00000459748 321 ntBASIC4.03□□□□□ -1.76
VPS11Q9H270 RN7SL738P-201ENST00000470264 297 ntBASIC4.03□□□□□ -1.76
VPS11Q9H270 AC010631.1-201ENST00000474150 156 ntBASIC4.03□□□□□ -1.76
VPS11Q9H270 ENSA-210ENST00000503241 574 ntTSL 3 BASIC4.03□□□□□ -1.76
VPS11Q9H270 AC114801.2-201ENST00000503825 781 ntBASIC4.03□□□□□ -1.76
VPS11Q9H270 RNU1-61P-201ENST00000516107 151 ntBASIC4.03□□□□□ -1.76
VPS11Q9H270 Y_RNA.673-201ENST00000516306 88 ntBASIC4.03□□□□□ -1.76
VPS11Q9H270 IGHV3-76-201ENST00000522465 295 ntBASIC4.03□□□□□ -1.76
VPS11Q9H270 AC022616.4-201ENST00000522985 181 ntBASIC4.03□□□□□ -1.76
VPS11Q9H270 FAM60DP-201ENST00000524174 632 ntBASIC4.03□□□□□ -1.76
VPS11Q9H270 HSPE1P5-201ENST00000561489 272 ntBASIC4.03□□□□□ -1.76
VPS11Q9H270 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC4.03□□□□□ -1.76
VPS11Q9H270 AC025627.2-201ENST00000576220 160 ntBASIC4.03□□□□□ -1.76
VPS11Q9H270 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.03□□□□□ -1.76
VPS11Q9H270 AC244505.7-201ENST00000599675 272 ntBASIC4.03□□□□□ -1.76
VPS11Q9H270 SDR42E1P2-201ENST00000614861 481 ntBASIC4.03□□□□□ -1.76
VPS11Q9H270 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.03□□□□□ -1.76
VPS11Q9H270 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC4.03□□□□□ -1.76
VPS11Q9H270 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
VPS11Q9H270 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
VPS11Q9H270 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.03□□□□□ -1.76
VPS11Q9H270 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
VPS11Q9H270 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
VPS11Q9H270 PRO1804-201ENST00000623780 2050 ntBASIC4.02□□□□□ -1.77
VPS11Q9H270 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
VPS11Q9H270 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
VPS11Q9H270 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
VPS11Q9H270 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
VPS11Q9H270 RNU6-188P-201ENST00000364207 107 ntBASIC4.02□□□□□ -1.77
VPS11Q9H270 SNORA20.1-201ENST00000364790 130 ntBASIC4.02□□□□□ -1.77
VPS11Q9H270 RNU6-806P-201ENST00000365147 105 ntBASIC4.02□□□□□ -1.77
VPS11Q9H270 RNU6-187P-201ENST00000384139 106 ntBASIC4.02□□□□□ -1.77
VPS11Q9H270 Y_RNA.785-201ENST00000384290 109 ntBASIC4.02□□□□□ -1.77
VPS11Q9H270 RNU6-713P-201ENST00000384761 107 ntBASIC4.02□□□□□ -1.77
VPS11Q9H270 MIR192-201ENST00000384915 110 ntBASIC4.02□□□□□ -1.77
VPS11Q9H270 MIR514A1-201ENST00000385133 98 ntBASIC4.02□□□□□ -1.77
VPS11Q9H270 RNU6-550P-201ENST00000391057 101 ntBASIC4.02□□□□□ -1.77
VPS11Q9H270 AL138878.1-201ENST00000405131 347 ntBASIC4.02□□□□□ -1.77
VPS11Q9H270 BX682237.1-201ENST00000415016 335 ntBASIC4.02□□□□□ -1.77
VPS11Q9H270 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC4.02□□□□□ -1.77
VPS11Q9H270 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC4.02□□□□□ -1.77
VPS11Q9H270 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.02□□□□□ -1.77
VPS11Q9H270 FTH1P25-201ENST00000447665 469 ntBASIC4.02□□□□□ -1.77
VPS11Q9H270 SCARNA18-201ENST00000459004 134 ntBASIC4.02□□□□□ -1.77
VPS11Q9H270 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC4.02□□□□□ -1.77
VPS11Q9H270 DYNLL1P5-201ENST00000467158 270 ntBASIC4.02□□□□□ -1.77
VPS11Q9H270 AC099522.1-202ENST00000514718 367 ntBASIC4.02□□□□□ -1.77
VPS11Q9H270 RNU6-111P-201ENST00000517179 105 ntBASIC4.02□□□□□ -1.77
VPS11Q9H270 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
VPS11Q9H270 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC4.02□□□□□ -1.77
VPS11Q9H270 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC4.02□□□□□ -1.77
VPS11Q9H270 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
VPS11Q9H270 SYF2P1-201ENST00000550658 413 ntBASIC4.02□□□□□ -1.77
VPS11Q9H270 AC090115.3-201ENST00000553218 849 ntBASIC4.02□□□□□ -1.77
VPS11Q9H270 MIR4330-201ENST00000579077 105 ntBASIC4.02□□□□□ -1.77
VPS11Q9H270 MIR5684-201ENST00000585074 65 ntBASIC4.02□□□□□ -1.77
VPS11Q9H270 MIR5692C1-201ENST00000585309 91 ntBASIC4.02□□□□□ -1.77
VPS11Q9H270 AC096772.1-201ENST00000609146 564 ntBASIC4.02□□□□□ -1.77
VPS11Q9H270 AL110115.1-201ENST00000614396 364 ntBASIC4.02□□□□□ -1.77
VPS11Q9H270 FTX_2.1-201ENST00000618816 94 ntBASIC4.02□□□□□ -1.77
VPS11Q9H270 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC4.02□□□□□ -1.77
VPS11Q9H270 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC4.02□□□□□ -1.77
VPS11Q9H270 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
VPS11Q9H270 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.02□□□□□ -1.77
VPS11Q9H270 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC4.02□□□□□ -1.77
VPS11Q9H270 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
VPS11Q9H270 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
VPS11Q9H270 Y_RNA.150-201ENST00000363562 102 ntBASIC4.01□□□□□ -1.77
VPS11Q9H270 RNU6-1059P-201ENST00000363752 98 ntBASIC4.01□□□□□ -1.77
VPS11Q9H270 Y_RNA.214-201ENST00000364201 112 ntBASIC4.01□□□□□ -1.77
VPS11Q9H270 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC4.01□□□□□ -1.77
VPS11Q9H270 Y_RNA.518-201ENST00000384552 113 ntBASIC4.01□□□□□ -1.77
VPS11Q9H270 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC4.01□□□□□ -1.77
VPS11Q9H270 YPEL5P1-201ENST00000419731 367 ntBASIC4.01□□□□□ -1.77
VPS11Q9H270 AL159169.1-201ENST00000421119 127 ntBASIC4.01□□□□□ -1.77
VPS11Q9H270 NDUFB4P7-201ENST00000423198 363 ntBASIC4.01□□□□□ -1.77
VPS11Q9H270 USMG5P1-201ENST00000425964 177 ntBASIC4.01□□□□□ -1.77
VPS11Q9H270 AL356867.1-201ENST00000429623 299 ntBASIC4.01□□□□□ -1.77
VPS11Q9H270 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.01□□□□□ -1.77
VPS11Q9H270 LAMTOR5P1-201ENST00000444290 270 ntBASIC4.01□□□□□ -1.77
VPS11Q9H270 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC4.01□□□□□ -1.77
VPS11Q9H270 RPS29P33-201ENST00000456717 146 ntBASIC4.01□□□□□ -1.77
VPS11Q9H270 RNA5SP246-201ENST00000458909 119 ntBASIC4.01□□□□□ -1.77
VPS11Q9H270 SNRPGP3-201ENST00000469405 227 ntBASIC4.01□□□□□ -1.77
VPS11Q9H270 RN7SL481P-201ENST00000477764 299 ntBASIC4.01□□□□□ -1.77
VPS11Q9H270 AC009901.1-201ENST00000506703 541 ntBASIC4.01□□□□□ -1.77
VPS11Q9H270 TBCAP3-201ENST00000512475 312 ntBASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 166.2 ms