Protein–RNA interactions for Protein: Q9C026

TRIM9, E3 ubiquitin-protein ligase TRIM9, humanhuman

Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM9Q9C026 RNU6-195P-201ENST00000411352 109 ntBASIC2.54□□□□□ -2
TRIM9Q9C026 RPS3AP3-201ENST00000411933 242 ntBASIC2.54□□□□□ -2
TRIM9Q9C026 AC006366.1-201ENST00000422002 759 ntBASIC2.54□□□□□ -2
TRIM9Q9C026 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.54□□□□□ -2
TRIM9Q9C026 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC2.54□□□□□ -2
TRIM9Q9C026 GTF2IP20-201ENST00000431663 360 ntBASIC2.54□□□□□ -2
TRIM9Q9C026 PGBD4P3-201ENST00000440731 581 ntBASIC2.54□□□□□ -2
TRIM9Q9C026 MTND1P12-201ENST00000455231 147 ntBASIC2.54□□□□□ -2
TRIM9Q9C026 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC2.54□□□□□ -2
TRIM9Q9C026 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.54□□□□□ -2
TRIM9Q9C026 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC2.54□□□□□ -2
TRIM9Q9C026 ANXA2P1-201ENST00000505539 926 ntBASIC2.54□□□□□ -2
TRIM9Q9C026 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.54□□□□□ -2
TRIM9Q9C026 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC2.54□□□□□ -2
TRIM9Q9C026 AC117532.1-201ENST00000514638 323 ntBASIC2.54□□□□□ -2
TRIM9Q9C026 Y_RNA.672-201ENST00000516289 104 ntBASIC2.54□□□□□ -2
TRIM9Q9C026 RNA5SP471-201ENST00000516971 106 ntBASIC2.54□□□□□ -2
TRIM9Q9C026 RNA5SP290-201ENST00000517133 127 ntBASIC2.54□□□□□ -2
TRIM9Q9C026 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC2.54□□□□□ -2
TRIM9Q9C026 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC2.54□□□□□ -2
TRIM9Q9C026 AP006587.4-201ENST00000526053 529 ntBASIC2.54□□□□□ -2
TRIM9Q9C026 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC2.54□□□□□ -2
TRIM9Q9C026 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.54□□□□□ -2
TRIM9Q9C026 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.54□□□□□ -2
TRIM9Q9C026 AC008498.1-201ENST00000613012 531 ntBASIC2.54□□□□□ -2
TRIM9Q9C026 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC2.54□□□□□ -2
TRIM9Q9C026 AL589994.2-201ENST00000621124 579 ntBASIC2.54□□□□□ -2
TRIM9Q9C026 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.54□□□□□ -2
TRIM9Q9C026 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.54□□□□□ -2
TRIM9Q9C026 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
TRIM9Q9C026 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.53□□□□□ -2
TRIM9Q9C026 RNU6-188P-201ENST00000364207 107 ntBASIC2.53□□□□□ -2
TRIM9Q9C026 SNORA70B-201ENST00000384210 135 ntBASIC2.53□□□□□ -2
TRIM9Q9C026 SNORD116-2-201ENST00000384274 95 ntBASIC2.53□□□□□ -2
TRIM9Q9C026 RNU6-297P-201ENST00000384636 107 ntBASIC2.53□□□□□ -2
TRIM9Q9C026 SNORD116-6-201ENST00000384711 96 ntBASIC2.53□□□□□ -2
TRIM9Q9C026 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC2.53□□□□□ -2
TRIM9Q9C026 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.53□□□□□ -2
TRIM9Q9C026 SEPT2P1-201ENST00000419651 180 ntBASIC2.53□□□□□ -2
TRIM9Q9C026 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC2.53□□□□□ -2
TRIM9Q9C026 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC2.53□□□□□ -2
TRIM9Q9C026 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.53□□□□□ -2
TRIM9Q9C026 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC2.53□□□□□ -2
TRIM9Q9C026 USP9YP15-201ENST00000442391 422 ntBASIC2.53□□□□□ -2
TRIM9Q9C026 MTND6P13-201ENST00000443510 523 ntBASIC2.53□□□□□ -2
TRIM9Q9C026 RPL12P25-201ENST00000455592 494 ntBASIC2.53□□□□□ -2
TRIM9Q9C026 RNA5SP269-201ENST00000459032 137 ntBASIC2.53□□□□□ -2
TRIM9Q9C026 MRPS17P3-201ENST00000465453 385 ntBASIC2.53□□□□□ -2
TRIM9Q9C026 RAP1BP2-201ENST00000478270 544 ntBASIC2.53□□□□□ -2
TRIM9Q9C026 NDUFB4P2-201ENST00000509515 391 ntBASIC2.53□□□□□ -2
TRIM9Q9C026 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.53□□□□□ -2
TRIM9Q9C026 AP000889.2-201ENST00000532684 490 ntBASIC2.53□□□□□ -2
TRIM9Q9C026 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC2.53□□□□□ -2
TRIM9Q9C026 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC2.53□□□□□ -2
TRIM9Q9C026 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC2.53□□□□□ -2
TRIM9Q9C026 AC091304.9-201ENST00000612091 226 ntBASIC2.53□□□□□ -2
TRIM9Q9C026 AC087241.4-201ENST00000612441 480 ntBASIC2.53□□□□□ -2
TRIM9Q9C026 AC025594.3-201ENST00000613068 790 ntBASIC2.53□□□□□ -2
TRIM9Q9C026 AL158063.1-201ENST00000615349 536 ntBASIC2.53□□□□□ -2
TRIM9Q9C026 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.53□□□□□ -2
TRIM9Q9C026 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC2.53□□□□□ -2
TRIM9Q9C026 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC2.53□□□□□ -2
TRIM9Q9C026 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
TRIM9Q9C026 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
TRIM9Q9C026 RNU6-1167P-201ENST00000363227 94 ntBASIC2.52□□□□□ -2.01
TRIM9Q9C026 U8.3-201ENST00000363321 132 ntBASIC2.52□□□□□ -2.01
TRIM9Q9C026 RNU6-512P-201ENST00000364438 103 ntBASIC2.52□□□□□ -2.01
TRIM9Q9C026 SNORA68.1-201ENST00000364537 132 ntBASIC2.52□□□□□ -2.01
TRIM9Q9C026 RNU6-14P-201ENST00000384630 106 ntBASIC2.52□□□□□ -2.01
TRIM9Q9C026 AL513475.1-201ENST00000406602 315 ntBASIC2.52□□□□□ -2.01
TRIM9Q9C026 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.52□□□□□ -2.01
TRIM9Q9C026 RAC1P6-201ENST00000423911 575 ntBASIC2.52□□□□□ -2.01
TRIM9Q9C026 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC2.52□□□□□ -2.01
TRIM9Q9C026 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC2.52□□□□□ -2.01
TRIM9Q9C026 AC104850.1-201ENST00000435940 476 ntBASIC2.52□□□□□ -2.01
TRIM9Q9C026 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.52□□□□□ -2.01
TRIM9Q9C026 NEFMP1-201ENST00000443423 1006 ntBASIC2.52□□□□□ -2.01
TRIM9Q9C026 MTND2P22-201ENST00000444325 1033 ntBASIC2.52□□□□□ -2.01
TRIM9Q9C026 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
TRIM9Q9C026 CECR9-201ENST00000453421 199 ntBASIC2.52□□□□□ -2.01
TRIM9Q9C026 AL033528.1-201ENST00000453780 140 ntBASIC2.52□□□□□ -2.01
TRIM9Q9C026 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC2.52□□□□□ -2.01
TRIM9Q9C026 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC2.52□□□□□ -2.01
TRIM9Q9C026 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.52□□□□□ -2.01
TRIM9Q9C026 Y_RNA.695-201ENST00000516715 107 ntBASIC2.52□□□□□ -2.01
TRIM9Q9C026 RN7SKP40-201ENST00000517211 242 ntBASIC2.52□□□□□ -2.01
TRIM9Q9C026 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2.52□□□□□ -2.01
TRIM9Q9C026 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.52□□□□□ -2.01
TRIM9Q9C026 AL356057.1-201ENST00000533798 831 ntBASIC2.52□□□□□ -2.01
TRIM9Q9C026 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC2.52□□□□□ -2.01
TRIM9Q9C026 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC2.52□□□□□ -2.01
TRIM9Q9C026 AC137800.2-201ENST00000574375 120 ntBASIC2.52□□□□□ -2.01
TRIM9Q9C026 AC103810.1-201ENST00000579873 453 ntBASIC2.52□□□□□ -2.01
TRIM9Q9C026 AC005771.1-201ENST00000585581 349 ntBASIC2.52□□□□□ -2.01
TRIM9Q9C026 AL355877.2-201ENST00000603670 358 ntBASIC2.52□□□□□ -2.01
TRIM9Q9C026 AC098826.3-201ENST00000603823 466 ntBASIC2.52□□□□□ -2.01
TRIM9Q9C026 SEPT7P9-203ENST00000604116 343 ntBASIC2.52□□□□□ -2.01
TRIM9Q9C026 AC007363.1-201ENST00000604736 620 ntBASIC2.52□□□□□ -2.01
TRIM9Q9C026 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
TRIM9Q9C026 AC034102.8-201ENST00000615146 484 ntBASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms