Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC2.94□□□□□ -1.94
PCGF1Q9BSM1 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC2.94□□□□□ -1.94
PCGF1Q9BSM1 AC012119.1-201ENST00000603184 222 ntBASIC2.94□□□□□ -1.94
PCGF1Q9BSM1 SRGNP1-201ENST00000603392 451 ntBASIC2.94□□□□□ -1.94
PCGF1Q9BSM1 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC2.94□□□□□ -1.94
PCGF1Q9BSM1 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
PCGF1Q9BSM1 U6.99-201ENST00000637524 83 ntBASIC2.94□□□□□ -1.94
PCGF1Q9BSM1 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC2.93□□□□□ -1.94
PCGF1Q9BSM1 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC2.93□□□□□ -1.94
PCGF1Q9BSM1 MIR412-201ENST00000362142 91 ntBASIC2.93□□□□□ -1.94
PCGF1Q9BSM1 RNA5SP42-201ENST00000364278 115 ntBASIC2.93□□□□□ -1.94
PCGF1Q9BSM1 RNU4-66P-201ENST00000365199 138 ntBASIC2.93□□□□□ -1.94
PCGF1Q9BSM1 AP002088.1-201ENST00000382740 395 ntBASIC2.93□□□□□ -1.94
PCGF1Q9BSM1 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
PCGF1Q9BSM1 EIF4EBP2P3-201ENST00000403144 334 ntBASIC2.93□□□□□ -1.94
PCGF1Q9BSM1 AL592114.1-201ENST00000403842 483 ntBASIC2.93□□□□□ -1.94
PCGF1Q9BSM1 AL592148.1-201ENST00000413568 445 ntBASIC2.93□□□□□ -1.94
PCGF1Q9BSM1 AL353621.1-201ENST00000418219 243 ntBASIC2.93□□□□□ -1.94
PCGF1Q9BSM1 BPY2DP-201ENST00000422208 265 ntBASIC2.93□□□□□ -1.94
PCGF1Q9BSM1 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC2.93□□□□□ -1.94
PCGF1Q9BSM1 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC2.93□□□□□ -1.94
PCGF1Q9BSM1 AC007560.1-201ENST00000426912 237 ntBASIC2.93□□□□□ -1.94
PCGF1Q9BSM1 CYCSP4-201ENST00000429682 331 ntBASIC2.93□□□□□ -1.94
PCGF1Q9BSM1 MRPS10P2-201ENST00000431226 381 ntBASIC2.93□□□□□ -1.94
PCGF1Q9BSM1 AL078601.1-201ENST00000444542 271 ntBASIC2.93□□□□□ -1.94
PCGF1Q9BSM1 AC125238.1-201ENST00000448842 249 ntBASIC2.93□□□□□ -1.94
PCGF1Q9BSM1 AL583843.1-201ENST00000456070 346 ntBASIC2.93□□□□□ -1.94
PCGF1Q9BSM1 RNU7-23P-201ENST00000459465 62 ntBASIC2.93□□□□□ -1.94
PCGF1Q9BSM1 AC010401.1-201ENST00000463867 348 ntBASIC2.93□□□□□ -1.94
PCGF1Q9BSM1 RN7SL442P-201ENST00000473804 320 ntBASIC2.93□□□□□ -1.94
PCGF1Q9BSM1 RPL21P93-201ENST00000480465 489 ntBASIC2.93□□□□□ -1.94
PCGF1Q9BSM1 AC069439.1-201ENST00000494739 167 ntBASIC2.93□□□□□ -1.94
PCGF1Q9BSM1 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
PCGF1Q9BSM1 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.93□□□□□ -1.94
PCGF1Q9BSM1 RNU6-1183P-201ENST00000517054 60 ntBASIC2.93□□□□□ -1.94
PCGF1Q9BSM1 SNORA31.21-201ENST00000517180 77 ntBASIC2.93□□□□□ -1.94
PCGF1Q9BSM1 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC2.93□□□□□ -1.94
PCGF1Q9BSM1 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC2.93□□□□□ -1.94
PCGF1Q9BSM1 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC2.93□□□□□ -1.94
PCGF1Q9BSM1 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC2.93□□□□□ -1.94
PCGF1Q9BSM1 CYCSP39-201ENST00000565821 309 ntBASIC2.93□□□□□ -1.94
PCGF1Q9BSM1 AC106782.4-201ENST00000568264 210 ntBASIC2.93□□□□□ -1.94
PCGF1Q9BSM1 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC2.93□□□□□ -1.94
PCGF1Q9BSM1 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC2.93□□□□□ -1.94
PCGF1Q9BSM1 AL161629.2-201ENST00000615347 275 ntBASIC2.93□□□□□ -1.94
PCGF1Q9BSM1 AC002553.4-201ENST00000616896 331 ntBASIC2.93□□□□□ -1.94
PCGF1Q9BSM1 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC2.93□□□□□ -1.94
PCGF1Q9BSM1 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC2.93□□□□□ -1.94
PCGF1Q9BSM1 TEX41-280ENST00000629185 591 ntTSL 5 BASIC2.93□□□□□ -1.94
PCGF1Q9BSM1 AC058791.1-201ENST00000608412 3198 ntBASIC2.93□□□□□ -1.94
PCGF1Q9BSM1 AL513302.2-201ENST00000562313 1842 ntBASIC2.93□□□□□ -1.94
PCGF1Q9BSM1 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC2.92□□□□□ -1.94
PCGF1Q9BSM1 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
PCGF1Q9BSM1 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
PCGF1Q9BSM1 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
PCGF1Q9BSM1 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
PCGF1Q9BSM1 Y_RNA.231-201ENST00000364358 102 ntBASIC2.92□□□□□ -1.94
PCGF1Q9BSM1 RNA5SP72-201ENST00000364442 117 ntBASIC2.92□□□□□ -1.94
PCGF1Q9BSM1 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC2.92□□□□□ -1.94
PCGF1Q9BSM1 Z98749.2-208ENST00000381646 500 ntBASIC2.92□□□□□ -1.94
PCGF1Q9BSM1 Y_RNA.399-201ENST00000383955 105 ntBASIC2.92□□□□□ -1.94
PCGF1Q9BSM1 RNU6-434P-201ENST00000384376 107 ntBASIC2.92□□□□□ -1.94
PCGF1Q9BSM1 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.92□□□□□ -1.94
PCGF1Q9BSM1 MIR887-201ENST00000401258 79 ntBASIC2.92□□□□□ -1.94
PCGF1Q9BSM1 RPS4XP7-201ENST00000406274 780 ntBASIC2.92□□□□□ -1.94
PCGF1Q9BSM1 RNU6-55P-201ENST00000411092 107 ntBASIC2.92□□□□□ -1.94
PCGF1Q9BSM1 Y_RNA.623-201ENST00000411128 95 ntBASIC2.92□□□□□ -1.94
PCGF1Q9BSM1 RNU6-954P-201ENST00000411355 107 ntBASIC2.92□□□□□ -1.94
PCGF1Q9BSM1 DBIP2-201ENST00000419076 262 ntBASIC2.92□□□□□ -1.94
PCGF1Q9BSM1 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC2.92□□□□□ -1.94
PCGF1Q9BSM1 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC2.92□□□□□ -1.94
PCGF1Q9BSM1 MTND1P2-201ENST00000430604 821 ntBASIC2.92□□□□□ -1.94
PCGF1Q9BSM1 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC2.92□□□□□ -1.94
PCGF1Q9BSM1 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC2.92□□□□□ -1.94
PCGF1Q9BSM1 RPL21P10-201ENST00000463521 490 ntBASIC2.92□□□□□ -1.94
PCGF1Q9BSM1 RN7SL594P-201ENST00000470590 287 ntBASIC2.92□□□□□ -1.94
PCGF1Q9BSM1 AC025518.1-201ENST00000479856 347 ntBASIC2.92□□□□□ -1.94
PCGF1Q9BSM1 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.92□□□□□ -1.94
PCGF1Q9BSM1 FCF1P3-201ENST00000496394 590 ntBASIC2.92□□□□□ -1.94
PCGF1Q9BSM1 AC114786.4-201ENST00000508771 728 ntBASIC2.92□□□□□ -1.94
PCGF1Q9BSM1 NAF1-205ENST00000509434 385 ntTSL 3 BASIC2.92□□□□□ -1.94
PCGF1Q9BSM1 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.92□□□□□ -1.94
PCGF1Q9BSM1 RNU1-86P-201ENST00000516108 154 ntBASIC2.92□□□□□ -1.94
PCGF1Q9BSM1 RNU6-1038P-201ENST00000516516 104 ntBASIC2.92□□□□□ -1.94
PCGF1Q9BSM1 RNU1-107P-201ENST00000516617 154 ntBASIC2.92□□□□□ -1.94
PCGF1Q9BSM1 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.92□□□□□ -1.94
PCGF1Q9BSM1 AHI1-217ENST00000534469 680 ntTSL 3 BASIC2.92□□□□□ -1.94
PCGF1Q9BSM1 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC2.92□□□□□ -1.94
PCGF1Q9BSM1 MTCO3P23-201ENST00000561363 289 ntBASIC2.92□□□□□ -1.94
PCGF1Q9BSM1 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC2.92□□□□□ -1.94
PCGF1Q9BSM1 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC2.92□□□□□ -1.94
PCGF1Q9BSM1 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC2.92□□□□□ -1.94
PCGF1Q9BSM1 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC2.92□□□□□ -1.94
PCGF1Q9BSM1 U6.42-201ENST00000618440 107 ntBASIC2.92□□□□□ -1.94
PCGF1Q9BSM1 AC022418.1-201ENST00000624118 445 ntBASIC2.92□□□□□ -1.94
PCGF1Q9BSM1 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC2.92□□□□□ -1.94
PCGF1Q9BSM1 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC2.92□□□□□ -1.94
PCGF1Q9BSM1 MIR3662-201ENST00000637030 95 ntBASIC2.92□□□□□ -1.94
PCGF1Q9BSM1 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC2.92□□□□□ -1.94
PCGF1Q9BSM1 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms