Protein–RNA interactions for Protein: Q9BRP4

PAAF1, Proteasomal ATPase-associated factor 1, humanhuman

Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1Q9BRP4 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC3.41□□□□□ -1.86
PAAF1Q9BRP4 FABP5P15-201ENST00000453566 214 ntBASIC3.41□□□□□ -1.86
PAAF1Q9BRP4 AL590639.1-201ENST00000456484 337 ntBASIC3.41□□□□□ -1.86
PAAF1Q9BRP4 SNRPGP3-201ENST00000469405 227 ntBASIC3.41□□□□□ -1.86
PAAF1Q9BRP4 AC021205.2-201ENST00000480069 347 ntBASIC3.41□□□□□ -1.86
PAAF1Q9BRP4 SUMO2P6-201ENST00000505273 288 ntBASIC3.41□□□□□ -1.86
PAAF1Q9BRP4 MTCO3P9-201ENST00000506989 781 ntBASIC3.41□□□□□ -1.86
PAAF1Q9BRP4 AC010486.1-201ENST00000511793 424 ntBASIC3.41□□□□□ -1.86
PAAF1Q9BRP4 RNU1-103P-201ENST00000516502 125 ntBASIC3.41□□□□□ -1.86
PAAF1Q9BRP4 Y_RNA.702-201ENST00000516843 96 ntBASIC3.41□□□□□ -1.86
PAAF1Q9BRP4 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.41□□□□□ -1.86
PAAF1Q9BRP4 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC3.41□□□□□ -1.86
PAAF1Q9BRP4 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC3.41□□□□□ -1.86
PAAF1Q9BRP4 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.41□□□□□ -1.86
PAAF1Q9BRP4 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC3.41□□□□□ -1.86
PAAF1Q9BRP4 AP000763.2-201ENST00000540641 163 ntBASIC3.41□□□□□ -1.86
PAAF1Q9BRP4 AC023050.3-201ENST00000541142 333 ntBASIC3.41□□□□□ -1.86
PAAF1Q9BRP4 AL157871.3-201ENST00000557231 293 ntBASIC3.41□□□□□ -1.86
PAAF1Q9BRP4 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.41□□□□□ -1.86
PAAF1Q9BRP4 MIR1273C-201ENST00000578669 77 ntBASIC3.41□□□□□ -1.86
PAAF1Q9BRP4 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.41□□□□□ -1.86
PAAF1Q9BRP4 AC092747.3-201ENST00000603769 301 ntBASIC3.41□□□□□ -1.86
PAAF1Q9BRP4 AC008962.1-201ENST00000605729 304 ntBASIC3.41□□□□□ -1.86
PAAF1Q9BRP4 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
PAAF1Q9BRP4 AP003122.6-201ENST00000623831 495 ntBASIC3.41□□□□□ -1.86
PAAF1Q9BRP4 AC090617.10-201ENST00000624308 134 ntBASIC3.41□□□□□ -1.86
PAAF1Q9BRP4 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC3.41□□□□□ -1.86
PAAF1Q9BRP4 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
PAAF1Q9BRP4 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.41□□□□□ -1.86
PAAF1Q9BRP4 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.41□□□□□ -1.86
PAAF1Q9BRP4 AC066616.2-201ENST00000559334 1481 ntBASIC3.41□□□□□ -1.86
PAAF1Q9BRP4 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.4□□□□□ -1.86
PAAF1Q9BRP4 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.4□□□□□ -1.86
PAAF1Q9BRP4 Y_RNA.378-201ENST00000365652 113 ntBASIC3.4□□□□□ -1.87
PAAF1Q9BRP4 RNU6-395P-201ENST00000365662 106 ntBASIC3.4□□□□□ -1.87
PAAF1Q9BRP4 MDM4-202ENST00000367180 547 ntTSL 3 BASIC3.4□□□□□ -1.87
PAAF1Q9BRP4 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.87
PAAF1Q9BRP4 SNORA44-201ENST00000384584 132 ntBASIC3.4□□□□□ -1.87
PAAF1Q9BRP4 RNA5SP219-201ENST00000390940 113 ntBASIC3.4□□□□□ -1.87
PAAF1Q9BRP4 AC007256.1-201ENST00000392253 2765 ntBASIC3.4□□□□□ -1.87
PAAF1Q9BRP4 RNU6-1025P-201ENST00000410629 104 ntBASIC3.4□□□□□ -1.87
PAAF1Q9BRP4 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.4□□□□□ -1.87
PAAF1Q9BRP4 RPL7P12-201ENST00000446719 750 ntBASIC3.4□□□□□ -1.87
PAAF1Q9BRP4 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC3.4□□□□□ -1.87
PAAF1Q9BRP4 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC3.4□□□□□ -1.87
PAAF1Q9BRP4 HMGN2P26-201ENST00000463169 339 ntBASIC3.4□□□□□ -1.87
PAAF1Q9BRP4 Y_RNA.654-201ENST00000497848 106 ntBASIC3.4□□□□□ -1.87
PAAF1Q9BRP4 AC008628.2-201ENST00000502605 298 ntBASIC3.4□□□□□ -1.87
PAAF1Q9BRP4 CCDC34P1-201ENST00000507441 517 ntBASIC3.4□□□□□ -1.87
PAAF1Q9BRP4 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.4□□□□□ -1.87
PAAF1Q9BRP4 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.4□□□□□ -1.87
PAAF1Q9BRP4 BTF3P12-201ENST00000519620 469 ntBASIC3.4□□□□□ -1.87
PAAF1Q9BRP4 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.4□□□□□ -1.87
PAAF1Q9BRP4 TGIF1P1-201ENST00000558095 802 ntBASIC3.4□□□□□ -1.87
PAAF1Q9BRP4 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.4□□□□□ -1.87
PAAF1Q9BRP4 AC136601.2-201ENST00000604356 474 ntBASIC3.4□□□□□ -1.87
PAAF1Q9BRP4 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.4□□□□□ -1.87
PAAF1Q9BRP4 AC092807.2-201ENST00000609367 243 ntBASIC3.4□□□□□ -1.87
PAAF1Q9BRP4 AP003400.5-201ENST00000624827 617 ntBASIC3.4□□□□□ -1.87
PAAF1Q9BRP4 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.4□□□□□ -1.87
PAAF1Q9BRP4 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
PAAF1Q9BRP4 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.87
PAAF1Q9BRP4 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
PAAF1Q9BRP4 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
PAAF1Q9BRP4 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.4□□□□□ -1.87
PAAF1Q9BRP4 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
PAAF1Q9BRP4 MTND4P12-201ENST00000498999 1377 ntBASIC3.39□□□□□ -1.87
PAAF1Q9BRP4 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
PAAF1Q9BRP4 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
PAAF1Q9BRP4 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.39□□□□□ -1.87
PAAF1Q9BRP4 CBX3P1-201ENST00000325243 554 ntBASIC3.39□□□□□ -1.87
PAAF1Q9BRP4 RNU6-82P-201ENST00000363970 107 ntBASIC3.39□□□□□ -1.87
PAAF1Q9BRP4 RNU6-45P-201ENST00000384471 107 ntBASIC3.39□□□□□ -1.87
PAAF1Q9BRP4 RNU6-1179P-201ENST00000384667 107 ntBASIC3.39□□□□□ -1.87
PAAF1Q9BRP4 SNORA1.3-201ENST00000384676 136 ntBASIC3.39□□□□□ -1.87
PAAF1Q9BRP4 POLHP1-201ENST00000411806 470 ntBASIC3.39□□□□□ -1.87
PAAF1Q9BRP4 AC012498.1-201ENST00000424037 437 ntBASIC3.39□□□□□ -1.87
PAAF1Q9BRP4 AC092047.1-201ENST00000424997 240 ntBASIC3.39□□□□□ -1.87
PAAF1Q9BRP4 RPL35AP12-201ENST00000425362 338 ntBASIC3.39□□□□□ -1.87
PAAF1Q9BRP4 SNRPEP9-201ENST00000436794 238 ntBASIC3.39□□□□□ -1.87
PAAF1Q9BRP4 CST9LP2-201ENST00000437612 320 ntBASIC3.39□□□□□ -1.87
PAAF1Q9BRP4 PRPS1P1-201ENST00000445305 876 ntBASIC3.39□□□□□ -1.87
PAAF1Q9BRP4 PMCHL2-203ENST00000457791 237 ntBASIC3.39□□□□□ -1.87
PAAF1Q9BRP4 AC012181.1-201ENST00000479895 423 ntBASIC3.39□□□□□ -1.87
PAAF1Q9BRP4 RPL30P14-201ENST00000482744 348 ntBASIC3.39□□□□□ -1.87
PAAF1Q9BRP4 AC006445.2-201ENST00000510061 472 ntBASIC3.39□□□□□ -1.87
PAAF1Q9BRP4 TBCAP3-201ENST00000512475 312 ntBASIC3.39□□□□□ -1.87
PAAF1Q9BRP4 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
PAAF1Q9BRP4 RPL7P20-201ENST00000520308 745 ntBASIC3.39□□□□□ -1.87
PAAF1Q9BRP4 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
PAAF1Q9BRP4 AC243972.3-201ENST00000539655 198 ntBASIC3.39□□□□□ -1.87
PAAF1Q9BRP4 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC3.39□□□□□ -1.87
PAAF1Q9BRP4 AL033523.1-201ENST00000605153 153 ntBASIC3.39□□□□□ -1.87
PAAF1Q9BRP4 ATP1B3P1-201ENST00000605365 821 ntBASIC3.39□□□□□ -1.87
PAAF1Q9BRP4 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.39□□□□□ -1.87
PAAF1Q9BRP4 AL355073.2-201ENST00000612106 557 ntBASIC3.39□□□□□ -1.87
PAAF1Q9BRP4 AC092794.2-201ENST00000620933 563 ntBASIC3.39□□□□□ -1.87
PAAF1Q9BRP4 AC099506.2-201ENST00000623074 221 ntBASIC3.39□□□□□ -1.87
PAAF1Q9BRP4 AC006386.2-201ENST00000624491 75 ntBASIC3.39□□□□□ -1.87
PAAF1Q9BRP4 AC012005.1-201ENST00000624575 75 ntBASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms