Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 RN7SKP282-201ENST00000516824 299 ntBASIC3.15□□□□□ -1.91
PKP4Q99569 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.15□□□□□ -1.91
PKP4Q99569 OR5AL2P-201ENST00000532185 920 ntBASIC3.15□□□□□ -1.91
PKP4Q99569 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC3.15□□□□□ -1.91
PKP4Q99569 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC3.15□□□□□ -1.91
PKP4Q99569 AC004024.1-201ENST00000549244 247 ntBASIC3.15□□□□□ -1.91
PKP4Q99569 BNIP3P6-201ENST00000549284 499 ntBASIC3.15□□□□□ -1.91
PKP4Q99569 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.15□□□□□ -1.91
PKP4Q99569 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.15□□□□□ -1.91
PKP4Q99569 MIR4775-201ENST00000581168 75 ntBASIC3.15□□□□□ -1.91
PKP4Q99569 AC069200.1-201ENST00000609511 323 ntBASIC3.15□□□□□ -1.91
PKP4Q99569 FRG1KP-201ENST00000623592 341 ntBASIC3.15□□□□□ -1.91
PKP4Q99569 ASNSP3-201ENST00000451989 1306 ntBASIC3.15□□□□□ -1.91
PKP4Q99569 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
PKP4Q99569 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
PKP4Q99569 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.14□□□□□ -1.91
PKP4Q99569 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.14□□□□□ -1.91
PKP4Q99569 SNORA62.1-201ENST00000364287 154 ntBASIC3.14□□□□□ -1.91
PKP4Q99569 RNU5E-6P-201ENST00000365574 115 ntBASIC3.14□□□□□ -1.91
PKP4Q99569 MIR34B-201ENST00000385076 84 ntBASIC3.14□□□□□ -1.91
PKP4Q99569 RNU6-510P-201ENST00000391239 108 ntBASIC3.14□□□□□ -1.91
PKP4Q99569 AL357075.1-201ENST00000404107 726 ntBASIC3.14□□□□□ -1.91
PKP4Q99569 RNU2-36P-201ENST00000410361 191 ntBASIC3.14□□□□□ -1.91
PKP4Q99569 RNU6-193P-201ENST00000410977 107 ntBASIC3.14□□□□□ -1.91
PKP4Q99569 AC005326.1-201ENST00000429197 123 ntBASIC3.14□□□□□ -1.91
PKP4Q99569 RPL36AP6-201ENST00000435770 321 ntBASIC3.14□□□□□ -1.91
PKP4Q99569 SNORD97-201ENST00000459187 142 ntBASIC3.14□□□□□ -1.91
PKP4Q99569 HMGN2P26-201ENST00000463169 339 ntBASIC3.14□□□□□ -1.91
PKP4Q99569 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC3.14□□□□□ -1.91
PKP4Q99569 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.14□□□□□ -1.91
PKP4Q99569 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.14□□□□□ -1.91
PKP4Q99569 RN7SKP219-201ENST00000516825 296 ntBASIC3.14□□□□□ -1.91
PKP4Q99569 AC104027.1-201ENST00000521887 300 ntBASIC3.14□□□□□ -1.91
PKP4Q99569 PSMA2P1-201ENST00000526365 646 ntBASIC3.14□□□□□ -1.91
PKP4Q99569 MIR2682-201ENST00000580305 110 ntBASIC3.14□□□□□ -1.91
PKP4Q99569 MIR4293-201ENST00000584305 78 ntBASIC3.14□□□□□ -1.91
PKP4Q99569 AC044792.1-201ENST00000593294 196 ntBASIC3.14□□□□□ -1.91
PKP4Q99569 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.14□□□□□ -1.91
PKP4Q99569 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC3.14□□□□□ -1.91
PKP4Q99569 AC093913.1-201ENST00000614178 329 ntBASIC3.14□□□□□ -1.91
PKP4Q99569 AC009248.2-201ENST00000619826 254 ntBASIC3.14□□□□□ -1.91
PKP4Q99569 AC090617.10-201ENST00000624308 134 ntBASIC3.14□□□□□ -1.91
PKP4Q99569 AC091903.1-201ENST00000624322 454 ntBASIC3.14□□□□□ -1.91
PKP4Q99569 AC006026.1-201ENST00000444025 1803 ntBASIC3.14□□□□□ -1.91
PKP4Q99569 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
PKP4Q99569 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
PKP4Q99569 ATP8A2P2-201ENST00000437678 1568 ntBASIC3.13□□□□□ -1.91
PKP4Q99569 AC099654.7-201ENST00000635788 2127 ntBASIC3.13□□□□□ -1.91
PKP4Q99569 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
PKP4Q99569 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
PKP4Q99569 Y_RNA.231-201ENST00000364358 102 ntBASIC3.13□□□□□ -1.91
PKP4Q99569 RNU6-116P-201ENST00000384042 109 ntBASIC3.13□□□□□ -1.91
PKP4Q99569 RNU2-29P-201ENST00000410423 189 ntBASIC3.13□□□□□ -1.91
PKP4Q99569 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC3.13□□□□□ -1.91
PKP4Q99569 RPL7L1P10-201ENST00000427790 463 ntBASIC3.13□□□□□ -1.91
PKP4Q99569 Z75741.1-201ENST00000446793 314 ntBASIC3.13□□□□□ -1.91
PKP4Q99569 MTND1P18-201ENST00000448191 573 ntBASIC3.13□□□□□ -1.91
PKP4Q99569 MTND3P16-201ENST00000452205 344 ntBASIC3.13□□□□□ -1.91
PKP4Q99569 RPS29P15-201ENST00000458329 171 ntBASIC3.13□□□□□ -1.91
PKP4Q99569 RPS27P29-201ENST00000463110 252 ntBASIC3.13□□□□□ -1.91
PKP4Q99569 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC3.13□□□□□ -1.91
PKP4Q99569 RPS15AP36-201ENST00000492022 382 ntBASIC3.13□□□□□ -1.91
PKP4Q99569 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC3.13□□□□□ -1.91
PKP4Q99569 AC074250.1-201ENST00000511117 192 ntBASIC3.13□□□□□ -1.91
PKP4Q99569 SNORA64.4-201ENST00000516632 81 ntBASIC3.13□□□□□ -1.91
PKP4Q99569 SCARNA20.6-201ENST00000517251 106 ntBASIC3.13□□□□□ -1.91
PKP4Q99569 AC100870.1-201ENST00000522035 505 ntBASIC3.13□□□□□ -1.91
PKP4Q99569 AC087241.2-201ENST00000535801 324 ntBASIC3.13□□□□□ -1.91
PKP4Q99569 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC3.13□□□□□ -1.91
PKP4Q99569 MIR4795-201ENST00000584182 89 ntBASIC3.13□□□□□ -1.91
PKP4Q99569 SRGNP1-201ENST00000603392 451 ntBASIC3.13□□□□□ -1.91
PKP4Q99569 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC3.13□□□□□ -1.91
PKP4Q99569 AL132765.2-201ENST00000610812 351 ntBASIC3.13□□□□□ -1.91
PKP4Q99569 uc_338.11-201ENST00000619132 160 ntBASIC3.13□□□□□ -1.91
PKP4Q99569 AC073476.4-201ENST00000628409 72 ntBASIC3.13□□□□□ -1.91
PKP4Q99569 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
PKP4Q99569 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.13□□□□□ -1.91
PKP4Q99569 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
PKP4Q99569 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
PKP4Q99569 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC3.12□□□□□ -1.91
PKP4Q99569 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
PKP4Q99569 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.12□□□□□ -1.91
PKP4Q99569 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.12□□□□□ -1.91
PKP4Q99569 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.12□□□□□ -1.91
PKP4Q99569 AP003122.5-201ENST00000527668 3766 ntBASIC3.12□□□□□ -1.91
PKP4Q99569 API5P2-201ENST00000397055 1498 ntBASIC3.12□□□□□ -1.91
PKP4Q99569 AL139276.1-201ENST00000311910 1001 ntBASIC3.12□□□□□ -1.91
PKP4Q99569 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
PKP4Q99569 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
PKP4Q99569 RNU6-179P-201ENST00000363350 107 ntBASIC3.12□□□□□ -1.91
PKP4Q99569 RNU6-1284P-201ENST00000363701 100 ntBASIC3.12□□□□□ -1.91
PKP4Q99569 SNORA32.2-201ENST00000384049 122 ntBASIC3.12□□□□□ -1.91
PKP4Q99569 MIR514A2-201ENST00000385131 88 ntBASIC3.12□□□□□ -1.91
PKP4Q99569 MIR514A3-201ENST00000385132 88 ntBASIC3.12□□□□□ -1.91
PKP4Q99569 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
PKP4Q99569 RNA5SP120-201ENST00000410900 112 ntBASIC3.12□□□□□ -1.91
PKP4Q99569 ERLEC1P1-201ENST00000433806 578 ntBASIC3.12□□□□□ -1.91
PKP4Q99569 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC3.12□□□□□ -1.91
PKP4Q99569 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC3.12□□□□□ -1.91
PKP4Q99569 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 148.8 ms