Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC4□□□□□ -1.77
CDK5RAP1Q96SZ6 SNORD62.1-201ENST00000362541 86 ntBASIC4□□□□□ -1.77
CDK5RAP1Q96SZ6 Y_RNA.150-201ENST00000363562 102 ntBASIC4□□□□□ -1.77
CDK5RAP1Q96SZ6 RNU6-1243P-201ENST00000364028 107 ntBASIC4□□□□□ -1.77
CDK5RAP1Q96SZ6 SNORA20.1-201ENST00000364790 130 ntBASIC4□□□□□ -1.77
CDK5RAP1Q96SZ6 RNU6-715P-201ENST00000365204 103 ntBASIC4□□□□□ -1.77
CDK5RAP1Q96SZ6 RNU6-33P-201ENST00000384793 107 ntBASIC4□□□□□ -1.77
CDK5RAP1Q96SZ6 AL138878.1-201ENST00000405131 347 ntBASIC4□□□□□ -1.77
CDK5RAP1Q96SZ6 MIR1302-6-201ENST00000408466 90 ntBASIC4□□□□□ -1.77
CDK5RAP1Q96SZ6 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC4□□□□□ -1.77
CDK5RAP1Q96SZ6 PIGPP3-201ENST00000425307 415 ntBASIC4□□□□□ -1.77
CDK5RAP1Q96SZ6 AL353997.1-201ENST00000432936 108 ntBASIC4□□□□□ -1.77
CDK5RAP1Q96SZ6 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC4□□□□□ -1.77
CDK5RAP1Q96SZ6 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC4□□□□□ -1.77
CDK5RAP1Q96SZ6 NDUFB4P9-201ENST00000511646 388 ntBASIC4□□□□□ -1.77
CDK5RAP1Q96SZ6 AC104057.1-201ENST00000515547 497 ntBASIC4□□□□□ -1.77
CDK5RAP1Q96SZ6 RNU2-69P-201ENST00000516061 100 ntBASIC4□□□□□ -1.77
CDK5RAP1Q96SZ6 RNU6-1023P-201ENST00000516137 106 ntBASIC4□□□□□ -1.77
CDK5RAP1Q96SZ6 RNU6-570P-201ENST00000517051 105 ntBASIC4□□□□□ -1.77
CDK5RAP1Q96SZ6 RNU6-685P-201ENST00000517088 95 ntBASIC4□□□□□ -1.77
CDK5RAP1Q96SZ6 AC022616.4-201ENST00000522985 181 ntBASIC4□□□□□ -1.77
CDK5RAP1Q96SZ6 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC4□□□□□ -1.77
CDK5RAP1Q96SZ6 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC4□□□□□ -1.77
CDK5RAP1Q96SZ6 AC034105.4-201ENST00000568304 277 ntBASIC4□□□□□ -1.77
CDK5RAP1Q96SZ6 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC4□□□□□ -1.77
CDK5RAP1Q96SZ6 AC087499.8-201ENST00000578406 226 ntBASIC4□□□□□ -1.77
CDK5RAP1Q96SZ6 MIR5188-201ENST00000583467 113 ntBASIC4□□□□□ -1.77
CDK5RAP1Q96SZ6 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC4□□□□□ -1.77
CDK5RAP1Q96SZ6 AC010900.2-201ENST00000604508 210 ntBASIC4□□□□□ -1.77
CDK5RAP1Q96SZ6 AL158032.1-201ENST00000605401 106 ntBASIC4□□□□□ -1.77
CDK5RAP1Q96SZ6 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC4□□□□□ -1.77
CDK5RAP1Q96SZ6 AL589994.2-201ENST00000621124 579 ntBASIC4□□□□□ -1.77
CDK5RAP1Q96SZ6 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4□□□□□ -1.77
CDK5RAP1Q96SZ6 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4□□□□□ -1.77
CDK5RAP1Q96SZ6 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
CDK5RAP1Q96SZ6 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4□□□□□ -1.77
CDK5RAP1Q96SZ6 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC4□□□□□ -1.77
CDK5RAP1Q96SZ6 HSPA8P4-201ENST00000511877 1920 ntBASIC3.99□□□□□ -1.77
CDK5RAP1Q96SZ6 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC3.99□□□□□ -1.77
CDK5RAP1Q96SZ6 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.99□□□□□ -1.77
CDK5RAP1Q96SZ6 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CDK5RAP1Q96SZ6 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
CDK5RAP1Q96SZ6 Y_RNA.39-201ENST00000362620 98 ntBASIC3.99□□□□□ -1.77
CDK5RAP1Q96SZ6 Y_RNA.151-201ENST00000363566 112 ntBASIC3.99□□□□□ -1.77
CDK5RAP1Q96SZ6 RNU6-1303P-201ENST00000364841 107 ntBASIC3.99□□□□□ -1.77
CDK5RAP1Q96SZ6 Y_RNA.380-201ENST00000365663 111 ntBASIC3.99□□□□□ -1.77
CDK5RAP1Q96SZ6 RNU6-946P-201ENST00000383878 107 ntBASIC3.99□□□□□ -1.77
CDK5RAP1Q96SZ6 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC3.99□□□□□ -1.77
CDK5RAP1Q96SZ6 MTATP6P29-201ENST00000415057 132 ntBASIC3.99□□□□□ -1.77
CDK5RAP1Q96SZ6 AC092809.3-201ENST00000415453 231 ntBASIC3.99□□□□□ -1.77
CDK5RAP1Q96SZ6 AC139712.2-201ENST00000424302 339 ntBASIC3.99□□□□□ -1.77
CDK5RAP1Q96SZ6 AC087650.1-201ENST00000431445 468 ntBASIC3.99□□□□□ -1.77
CDK5RAP1Q96SZ6 AC011742.1-201ENST00000431448 434 ntBASIC3.99□□□□□ -1.77
CDK5RAP1Q96SZ6 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC3.99□□□□□ -1.77
CDK5RAP1Q96SZ6 NOTCH2P1-201ENST00000443481 624 ntBASIC3.99□□□□□ -1.77
CDK5RAP1Q96SZ6 RPS17P13-201ENST00000448974 407 ntBASIC3.99□□□□□ -1.77
CDK5RAP1Q96SZ6 FABP5P13-201ENST00000452144 328 ntBASIC3.99□□□□□ -1.77
CDK5RAP1Q96SZ6 RPS23P3-201ENST00000470993 430 ntBASIC3.99□□□□□ -1.77
CDK5RAP1Q96SZ6 COX7A2P2-201ENST00000505291 250 ntBASIC3.99□□□□□ -1.77
CDK5RAP1Q96SZ6 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC3.99□□□□□ -1.77
CDK5RAP1Q96SZ6 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC3.99□□□□□ -1.77
CDK5RAP1Q96SZ6 AC026726.1-201ENST00000512859 601 ntBASIC3.99□□□□□ -1.77
CDK5RAP1Q96SZ6 RNU1-45P-201ENST00000517191 141 ntBASIC3.99□□□□□ -1.77
CDK5RAP1Q96SZ6 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC3.99□□□□□ -1.77
CDK5RAP1Q96SZ6 STX3-204ENST00000530221 534 ntTSL 5 BASIC3.99□□□□□ -1.77
CDK5RAP1Q96SZ6 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.99□□□□□ -1.77
CDK5RAP1Q96SZ6 MIR3941-201ENST00000582572 103 ntBASIC3.99□□□□□ -1.77
CDK5RAP1Q96SZ6 MIR5187-201ENST00000583479 76 ntBASIC3.99□□□□□ -1.77
CDK5RAP1Q96SZ6 AC098479.1-201ENST00000609225 154 ntBASIC3.99□□□□□ -1.77
CDK5RAP1Q96SZ6 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.99□□□□□ -1.77
CDK5RAP1Q96SZ6 AC006065.5-201ENST00000623427 349 ntBASIC3.99□□□□□ -1.77
CDK5RAP1Q96SZ6 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.99□□□□□ -1.77
CDK5RAP1Q96SZ6 MIR4272-201ENST00000635924 64 ntBASIC3.99□□□□□ -1.77
CDK5RAP1Q96SZ6 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
CDK5RAP1Q96SZ6 HSPA8P1-201ENST00000425843 1833 ntBASIC3.99□□□□□ -1.77
CDK5RAP1Q96SZ6 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
CDK5RAP1Q96SZ6 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC3.99□□□□□ -1.77
CDK5RAP1Q96SZ6 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.99□□□□□ -1.77
CDK5RAP1Q96SZ6 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CDK5RAP1Q96SZ6 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
CDK5RAP1Q96SZ6 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.99□□□□□ -1.77
CDK5RAP1Q96SZ6 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.98□□□□□ -1.77
CDK5RAP1Q96SZ6 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
CDK5RAP1Q96SZ6 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.98□□□□□ -1.77
CDK5RAP1Q96SZ6 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
CDK5RAP1Q96SZ6 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
CDK5RAP1Q96SZ6 RNA5SP322-201ENST00000363617 119 ntBASIC3.98□□□□□ -1.77
CDK5RAP1Q96SZ6 RNU6-960P-201ENST00000364056 120 ntBASIC3.98□□□□□ -1.77
CDK5RAP1Q96SZ6 SNORA62.3-201ENST00000365110 153 ntBASIC3.98□□□□□ -1.77
CDK5RAP1Q96SZ6 SNORD14.1-201ENST00000365609 90 ntBASIC3.98□□□□□ -1.77
CDK5RAP1Q96SZ6 RNU6-187P-201ENST00000384139 106 ntBASIC3.98□□□□□ -1.77
CDK5RAP1Q96SZ6 RNU6-393P-201ENST00000384475 107 ntBASIC3.98□□□□□ -1.77
CDK5RAP1Q96SZ6 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
CDK5RAP1Q96SZ6 AC110754.1-201ENST00000399740 601 ntBASIC3.98□□□□□ -1.77
CDK5RAP1Q96SZ6 AL109755.1-201ENST00000401791 649 ntBASIC3.98□□□□□ -1.77
CDK5RAP1Q96SZ6 RN7SKP27-201ENST00000410684 333 ntBASIC3.98□□□□□ -1.77
CDK5RAP1Q96SZ6 AC097713.2-201ENST00000430199 356 ntBASIC3.98□□□□□ -1.77
CDK5RAP1Q96SZ6 Z95327.1-201ENST00000446082 482 ntBASIC3.98□□□□□ -1.77
CDK5RAP1Q96SZ6 GAPDHP27-201ENST00000447427 1020 ntBASIC3.98□□□□□ -1.77
CDK5RAP1Q96SZ6 HMGN2P7-201ENST00000456186 273 ntBASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 369.8 ms