Protein–RNA interactions for Protein: Q96MR9

ZNF560, Zinc finger protein 560, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF560Q96MR9 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.57□□□□□ -2
ZNF560Q96MR9 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC2.57□□□□□ -2
ZNF560Q96MR9 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC2.57□□□□□ -2
ZNF560Q96MR9 AC060766.3-201ENST00000591442 263 ntBASIC2.57□□□□□ -2
ZNF560Q96MR9 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.57□□□□□ -2
ZNF560Q96MR9 AC022893.3-201ENST00000607665 437 ntBASIC2.57□□□□□ -2
ZNF560Q96MR9 AL360219.1-201ENST00000610230 366 ntBASIC2.57□□□□□ -2
ZNF560Q96MR9 U6.99-201ENST00000637524 83 ntBASIC2.57□□□□□ -2
ZNF560Q96MR9 MTND4P27-201ENST00000450813 1354 ntBASIC2.57□□□□□ -2
ZNF560Q96MR9 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
ZNF560Q96MR9 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.57□□□□□ -2
ZNF560Q96MR9 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.57□□□□□ -2
ZNF560Q96MR9 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC2.57□□□□□ -2
ZNF560Q96MR9 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.56□□□□□ -2
ZNF560Q96MR9 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.56□□□□□ -2
ZNF560Q96MR9 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.56□□□□□ -2
ZNF560Q96MR9 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.56□□□□□ -2
ZNF560Q96MR9 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
ZNF560Q96MR9 RNA5SP289-201ENST00000362332 137 ntBASIC2.56□□□□□ -2
ZNF560Q96MR9 RNU5F-7P-201ENST00000363696 115 ntBASIC2.56□□□□□ -2
ZNF560Q96MR9 SNORA67.1-201ENST00000364749 141 ntBASIC2.56□□□□□ -2
ZNF560Q96MR9 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC2.56□□□□□ -2
ZNF560Q96MR9 XGY1-201ENST00000381172 446 ntBASIC2.56□□□□□ -2
ZNF560Q96MR9 DEFA7P-201ENST00000382676 285 ntBASIC2.56□□□□□ -2
ZNF560Q96MR9 AL031577.2-201ENST00000404133 280 ntBASIC2.56□□□□□ -2
ZNF560Q96MR9 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC2.56□□□□□ -2
ZNF560Q96MR9 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC2.56□□□□□ -2
ZNF560Q96MR9 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.56□□□□□ -2
ZNF560Q96MR9 USP9YP12-201ENST00000450481 570 ntBASIC2.56□□□□□ -2
ZNF560Q96MR9 AC093899.1-201ENST00000457984 376 ntBASIC2.56□□□□□ -2
ZNF560Q96MR9 AL139824.2-201ENST00000458731 1095 ntBASIC2.56□□□□□ -2
ZNF560Q96MR9 RNU7-125P-201ENST00000458760 62 ntBASIC2.56□□□□□ -2
ZNF560Q96MR9 BZW1P2-201ENST00000473537 826 ntBASIC2.56□□□□□ -2
ZNF560Q96MR9 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC2.56□□□□□ -2
ZNF560Q96MR9 AC010587.1-201ENST00000505809 469 ntBASIC2.56□□□□□ -2
ZNF560Q96MR9 AC026436.1-201ENST00000510537 270 ntBASIC2.56□□□□□ -2
ZNF560Q96MR9 MRPS33P3-201ENST00000513456 322 ntBASIC2.56□□□□□ -2
ZNF560Q96MR9 RNU6-914P-201ENST00000516749 109 ntBASIC2.56□□□□□ -2
ZNF560Q96MR9 AC009902.1-201ENST00000519351 183 ntBASIC2.56□□□□□ -2
ZNF560Q96MR9 BTF3P12-201ENST00000519620 469 ntBASIC2.56□□□□□ -2
ZNF560Q96MR9 AP003181.2-201ENST00000528941 181 ntBASIC2.56□□□□□ -2
ZNF560Q96MR9 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC2.56□□□□□ -2
ZNF560Q96MR9 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC2.56□□□□□ -2
ZNF560Q96MR9 AL121821.2-201ENST00000556081 394 ntBASIC2.56□□□□□ -2
ZNF560Q96MR9 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC2.56□□□□□ -2
ZNF560Q96MR9 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC2.56□□□□□ -2
ZNF560Q96MR9 MIR3167-201ENST00000579623 85 ntBASIC2.56□□□□□ -2
ZNF560Q96MR9 AC073544.2-201ENST00000601155 540 ntBASIC2.56□□□□□ -2
ZNF560Q96MR9 WISP1-OT1-201ENST00000602893 642 ntBASIC2.56□□□□□ -2
ZNF560Q96MR9 AL353778.1-201ENST00000603149 408 ntBASIC2.56□□□□□ -2
ZNF560Q96MR9 AL022161.1-201ENST00000604390 213 ntBASIC2.56□□□□□ -2
ZNF560Q96MR9 AP002360.4-201ENST00000606980 481 ntBASIC2.56□□□□□ -2
ZNF560Q96MR9 AC067747.1-201ENST00000608026 250 ntBASIC2.56□□□□□ -2
ZNF560Q96MR9 uc_338.14-201ENST00000613162 166 ntBASIC2.56□□□□□ -2
ZNF560Q96MR9 AC122133.1-201ENST00000613964 233 ntBASIC2.56□□□□□ -2
ZNF560Q96MR9 AL512643.1-201ENST00000635735 524 ntBASIC2.56□□□□□ -2
ZNF560Q96MR9 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC2.56□□□□□ -2
ZNF560Q96MR9 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
ZNF560Q96MR9 AC004944.1-201ENST00000517807 3059 ntBASIC2.55□□□□□ -2
ZNF560Q96MR9 AC073343.1-201ENST00000328239 651 ntBASIC2.55□□□□□ -2
ZNF560Q96MR9 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.55□□□□□ -2
ZNF560Q96MR9 AL356583.2-201ENST00000426536 280 ntBASIC2.55□□□□□ -2
ZNF560Q96MR9 ATP8A2P3-201ENST00000426792 1536 ntBASIC2.55□□□□□ -2
ZNF560Q96MR9 AC093106.2-201ENST00000428212 385 ntBASIC2.55□□□□□ -2
ZNF560Q96MR9 AC119618.1-201ENST00000434191 222 ntBASIC2.55□□□□□ -2
ZNF560Q96MR9 MTND5P30-201ENST00000452896 1731 ntBASIC2.55□□□□□ -2
ZNF560Q96MR9 ZNF271P-202ENST00000465539 1970 ntBASIC2.55□□□□□ -2
ZNF560Q96MR9 RPS3AP22-201ENST00000488297 769 ntBASIC2.55□□□□□ -2
ZNF560Q96MR9 AC007182.2-201ENST00000489251 402 ntBASIC2.55□□□□□ -2
ZNF560Q96MR9 MTCYBP35-201ENST00000503630 1137 ntBASIC2.55□□□□□ -2
ZNF560Q96MR9 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC2.55□□□□□ -2
ZNF560Q96MR9 AC109927.2-201ENST00000506416 303 ntBASIC2.55□□□□□ -2
ZNF560Q96MR9 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC2.55□□□□□ -2
ZNF560Q96MR9 AC106038.2-201ENST00000520706 568 ntBASIC2.55□□□□□ -2
ZNF560Q96MR9 AP003122.4-201ENST00000530980 758 ntBASIC2.55□□□□□ -2
ZNF560Q96MR9 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.55□□□□□ -2
ZNF560Q96MR9 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC2.55□□□□□ -2
ZNF560Q96MR9 MIR4782-201ENST00000577987 79 ntBASIC2.55□□□□□ -2
ZNF560Q96MR9 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.55□□□□□ -2
ZNF560Q96MR9 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC2.55□□□□□ -2
ZNF560Q96MR9 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.55□□□□□ -2
ZNF560Q96MR9 AC112191.3-201ENST00000604371 277 ntBASIC2.55□□□□□ -2
ZNF560Q96MR9 AC092354.1-201ENST00000606057 376 ntBASIC2.55□□□□□ -2
ZNF560Q96MR9 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC2.55□□□□□ -2
ZNF560Q96MR9 MIR6134-201ENST00000617606 109 ntBASIC2.55□□□□□ -2
ZNF560Q96MR9 AL449363.1-201ENST00000617815 186 ntBASIC2.55□□□□□ -2
ZNF560Q96MR9 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
ZNF560Q96MR9 AC069528.2-201ENST00000624849 1991 ntBASIC2.55□□□□□ -2
ZNF560Q96MR9 MIR7157-201ENST00000635801 60 ntBASIC2.55□□□□□ -2
ZNF560Q96MR9 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.54□□□□□ -2
ZNF560Q96MR9 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.54□□□□□ -2
ZNF560Q96MR9 CDC27P3-201ENST00000635418 1910 ntBASIC2.54□□□□□ -2
ZNF560Q96MR9 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.54□□□□□ -2
ZNF560Q96MR9 SNORD56.2-201ENST00000363242 71 ntBASIC2.54□□□□□ -2
ZNF560Q96MR9 RNU6-553P-201ENST00000364047 96 ntBASIC2.54□□□□□ -2
ZNF560Q96MR9 SNORA4.3-201ENST00000365564 137 ntBASIC2.54□□□□□ -2
ZNF560Q96MR9 Z98749.2-208ENST00000381646 500 ntBASIC2.54□□□□□ -2
ZNF560Q96MR9 Y_RNA.560-201ENST00000384689 102 ntBASIC2.54□□□□□ -2
ZNF560Q96MR9 RNU6-19P-201ENST00000384718 107 ntBASIC2.54□□□□□ -2
ZNF560Q96MR9 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 138.3 ms