Protein–RNA interactions for Protein: Q96K76

USP47, Ubiquitin carboxyl-terminal hydrolase 47, humanhuman

Predictions only

Length 1,375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP47Q96K76 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
USP47Q96K76 RNU4-68P-201ENST00000364314 141 ntBASIC2.24□□□□□ -2.05
USP47Q96K76 Y_RNA.466-201ENST00000384294 113 ntBASIC2.24□□□□□ -2.05
USP47Q96K76 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC2.24□□□□□ -2.05
USP47Q96K76 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC2.24□□□□□ -2.05
USP47Q96K76 BX510359.4-201ENST00000423750 193 ntBASIC2.24□□□□□ -2.05
USP47Q96K76 ELOCP14-201ENST00000428070 331 ntBASIC2.24□□□□□ -2.05
USP47Q96K76 NDUFA5P4-201ENST00000436704 385 ntBASIC2.24□□□□□ -2.05
USP47Q96K76 AL117351.1-201ENST00000438864 766 ntBASIC2.24□□□□□ -2.05
USP47Q96K76 ELOCP7-201ENST00000439968 331 ntBASIC2.24□□□□□ -2.05
USP47Q96K76 OSTCP8-201ENST00000445117 448 ntBASIC2.24□□□□□ -2.05
USP47Q96K76 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC2.24□□□□□ -2.05
USP47Q96K76 AC245517.4-201ENST00000448601 281 ntBASIC2.24□□□□□ -2.05
USP47Q96K76 AMD1P1-201ENST00000457220 922 ntBASIC2.24□□□□□ -2.05
USP47Q96K76 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC2.24□□□□□ -2.05
USP47Q96K76 RNU7-26P-201ENST00000458980 63 ntBASIC2.24□□□□□ -2.05
USP47Q96K76 AHI1-208ENST00000488690 712 ntTSL 5 BASIC2.24□□□□□ -2.05
USP47Q96K76 AC034222.1-201ENST00000494052 532 ntBASIC2.24□□□□□ -2.05
USP47Q96K76 AC098591.2-201ENST00000510152 315 ntBASIC2.24□□□□□ -2.05
USP47Q96K76 SCARNA11.3-201ENST00000517276 130 ntBASIC2.24□□□□□ -2.05
USP47Q96K76 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.24□□□□□ -2.05
USP47Q96K76 AC087441.2-201ENST00000529141 262 ntBASIC2.24□□□□□ -2.05
USP47Q96K76 MTCO2P15-201ENST00000532655 656 ntBASIC2.24□□□□□ -2.05
USP47Q96K76 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC2.24□□□□□ -2.05
USP47Q96K76 AC121758.2-201ENST00000553271 193 ntBASIC2.24□□□□□ -2.05
USP47Q96K76 AL359212.1-201ENST00000556608 614 ntBASIC2.24□□□□□ -2.05
USP47Q96K76 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.24□□□□□ -2.05
USP47Q96K76 AC068944.2-201ENST00000610373 403 ntBASIC2.24□□□□□ -2.05
USP47Q96K76 AP000676.3-201ENST00000623299 569 ntBASIC2.24□□□□□ -2.05
USP47Q96K76 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.24□□□□□ -2.05
USP47Q96K76 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC2.24□□□□□ -2.05
USP47Q96K76 SNORA67.1-201ENST00000364749 141 ntBASIC2.23□□□□□ -2.05
USP47Q96K76 AP000275.1-201ENST00000411943 390 ntBASIC2.23□□□□□ -2.05
USP47Q96K76 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC2.23□□□□□ -2.05
USP47Q96K76 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC2.23□□□□□ -2.05
USP47Q96K76 USP9YP26-201ENST00000421008 661 ntBASIC2.23□□□□□ -2.05
USP47Q96K76 SKA2P1-201ENST00000425592 390 ntBASIC2.23□□□□□ -2.05
USP47Q96K76 AC244035.1-201ENST00000430042 390 ntBASIC2.23□□□□□ -2.05
USP47Q96K76 AL451074.3-201ENST00000437709 472 ntBASIC2.23□□□□□ -2.05
USP47Q96K76 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC2.23□□□□□ -2.05
USP47Q96K76 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC2.23□□□□□ -2.05
USP47Q96K76 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC2.23□□□□□ -2.05
USP47Q96K76 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC2.23□□□□□ -2.05
USP47Q96K76 RPS27AP10-201ENST00000496103 208 ntBASIC2.23□□□□□ -2.05
USP47Q96K76 AC010587.2-201ENST00000511727 448 ntBASIC2.23□□□□□ -2.05
USP47Q96K76 RNU5F-8P-201ENST00000515941 111 ntBASIC2.23□□□□□ -2.05
USP47Q96K76 RNU6-927P-201ENST00000516199 100 ntBASIC2.23□□□□□ -2.05
USP47Q96K76 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2.23□□□□□ -2.05
USP47Q96K76 AL133153.1-201ENST00000557756 303 ntBASIC2.23□□□□□ -2.05
USP47Q96K76 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC2.23□□□□□ -2.05
USP47Q96K76 AC007349.4-201ENST00000608114 532 ntBASIC2.23□□□□□ -2.05
USP47Q96K76 AC010889.1-201ENST00000566193 2666 ntBASIC2.23□□□□□ -2.05
USP47Q96K76 AC080100.1-201ENST00000624239 5356 ntBASIC2.23□□□□□ -2.05
USP47Q96K76 MTND5P33-201ENST00000571250 1450 ntBASIC2.23□□□□□ -2.05
USP47Q96K76 RNU6-462P-201ENST00000362659 105 ntBASIC2.23□□□□□ -2.05
USP47Q96K76 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC2.23□□□□□ -2.05
USP47Q96K76 MIR122-201ENST00000385044 85 ntBASIC2.23□□□□□ -2.05
USP47Q96K76 RNU2-68P-201ENST00000410878 191 ntBASIC2.23□□□□□ -2.05
USP47Q96K76 AL359704.1-201ENST00000411586 781 ntBASIC2.23□□□□□ -2.05
USP47Q96K76 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC2.23□□□□□ -2.05
USP47Q96K76 ELOCP30-201ENST00000447108 299 ntBASIC2.23□□□□□ -2.05
USP47Q96K76 AC020550.1-201ENST00000447385 163 ntBASIC2.23□□□□□ -2.05
USP47Q96K76 AL121769.1-201ENST00000469473 401 ntBASIC2.23□□□□□ -2.05
USP47Q96K76 AC093809.1-201ENST00000509155 340 ntBASIC2.23□□□□□ -2.05
USP47Q96K76 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC2.23□□□□□ -2.05
USP47Q96K76 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC2.23□□□□□ -2.05
USP47Q96K76 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC2.23□□□□□ -2.05
USP47Q96K76 AC093012.1-202ENST00000549403 582 ntBASIC2.23□□□□□ -2.05
USP47Q96K76 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC2.23□□□□□ -2.05
USP47Q96K76 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC2.23□□□□□ -2.05
USP47Q96K76 AC023824.2-201ENST00000566185 400 ntBASIC2.23□□□□□ -2.05
USP47Q96K76 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC2.23□□□□□ -2.05
USP47Q96K76 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC2.23□□□□□ -2.05
USP47Q96K76 AC021171.1-201ENST00000603137 706 ntBASIC2.23□□□□□ -2.05
USP47Q96K76 DPPA3P3-201ENST00000603842 430 ntBASIC2.23□□□□□ -2.05
USP47Q96K76 AC135507.1-201ENST00000607214 561 ntBASIC2.23□□□□□ -2.05
USP47Q96K76 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC2.23□□□□□ -2.05
USP47Q96K76 HMGB1P24-202ENST00000615653 685 ntBASIC2.23□□□□□ -2.05
USP47Q96K76 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC2.23□□□□□ -2.05
USP47Q96K76 AL589994.2-201ENST00000621124 579 ntBASIC2.23□□□□□ -2.05
USP47Q96K76 MIR3199-2-201ENST00000636243 86 ntBASIC2.23□□□□□ -2.05
USP47Q96K76 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.22□□□□□ -2.05
USP47Q96K76 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
USP47Q96K76 MTND4P27-201ENST00000450813 1354 ntBASIC2.22□□□□□ -2.05
USP47Q96K76 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.22□□□□□ -2.05
USP47Q96K76 MIR489-201ENST00000384923 84 ntBASIC2.22□□□□□ -2.05
USP47Q96K76 AC119751.3-201ENST00000399720 670 ntBASIC2.22□□□□□ -2.05
USP47Q96K76 AC004965.1-201ENST00000413033 213 ntBASIC2.22□□□□□ -2.05
USP47Q96K76 MTND1P28-201ENST00000435623 950 ntBASIC2.22□□□□□ -2.05
USP47Q96K76 COX6CP12-201ENST00000446748 202 ntBASIC2.22□□□□□ -2.05
USP47Q96K76 AC013267.1-201ENST00000458227 267 ntBASIC2.22□□□□□ -2.05
USP47Q96K76 AL049829.1-201ENST00000465411 156 ntBASIC2.22□□□□□ -2.05
USP47Q96K76 RPL7P18-201ENST00000478965 734 ntBASIC2.22□□□□□ -2.05
USP47Q96K76 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC2.22□□□□□ -2.05
USP47Q96K76 NDUFB4P2-201ENST00000509515 391 ntBASIC2.22□□□□□ -2.05
USP47Q96K76 MTCYBP43-201ENST00000513621 740 ntBASIC2.22□□□□□ -2.05
USP47Q96K76 AC022447.1-201ENST00000515358 464 ntBASIC2.22□□□□□ -2.05
USP47Q96K76 RNA5SP165-201ENST00000517142 115 ntBASIC2.22□□□□□ -2.05
USP47Q96K76 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.22□□□□□ -2.05
USP47Q96K76 BTF3P12-201ENST00000519620 469 ntBASIC2.22□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 127.9 ms