Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
CHAMP1Q96JM3 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
CHAMP1Q96JM3 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CHAMP1Q96JM3 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC4.31□□□□□ -1.72
CHAMP1Q96JM3 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CHAMP1Q96JM3 AC138393.1-203ENST00000327086 343 ntBASIC4.31□□□□□ -1.72
CHAMP1Q96JM3 RNA5SP72-201ENST00000364442 117 ntBASIC4.31□□□□□ -1.72
CHAMP1Q96JM3 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CHAMP1Q96JM3 U1.1-201ENST00000384101 164 ntBASIC4.31□□□□□ -1.72
CHAMP1Q96JM3 RHEBP3-201ENST00000411920 351 ntBASIC4.31□□□□□ -1.72
CHAMP1Q96JM3 AC017079.2-201ENST00000416102 485 ntBASIC4.31□□□□□ -1.72
CHAMP1Q96JM3 MCFD2P1-201ENST00000417812 300 ntBASIC4.31□□□□□ -1.72
CHAMP1Q96JM3 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.31□□□□□ -1.72
CHAMP1Q96JM3 CYCSP32-201ENST00000440548 321 ntBASIC4.31□□□□□ -1.72
CHAMP1Q96JM3 RPS24P13-201ENST00000442520 397 ntBASIC4.31□□□□□ -1.72
CHAMP1Q96JM3 NOTCH2P1-201ENST00000443481 624 ntBASIC4.31□□□□□ -1.72
CHAMP1Q96JM3 AC084357.1-201ENST00000473404 255 ntBASIC4.31□□□□□ -1.72
CHAMP1Q96JM3 AL135752.1-201ENST00000479477 471 ntBASIC4.31□□□□□ -1.72
CHAMP1Q96JM3 RPL7P42-201ENST00000481005 679 ntBASIC4.31□□□□□ -1.72
CHAMP1Q96JM3 AC026801.1-201ENST00000497178 464 ntBASIC4.31□□□□□ -1.72
CHAMP1Q96JM3 MTND3P25-201ENST00000509243 135 ntBASIC4.31□□□□□ -1.72
CHAMP1Q96JM3 APOOP4-201ENST00000513530 597 ntBASIC4.31□□□□□ -1.72
CHAMP1Q96JM3 Y_RNA.708-201ENST00000516950 96 ntBASIC4.31□□□□□ -1.72
CHAMP1Q96JM3 Y_RNA.720-201ENST00000517166 92 ntBASIC4.31□□□□□ -1.72
CHAMP1Q96JM3 RN7SKP289-201ENST00000517244 295 ntBASIC4.31□□□□□ -1.72
CHAMP1Q96JM3 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC4.31□□□□□ -1.72
CHAMP1Q96JM3 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC4.31□□□□□ -1.72
CHAMP1Q96JM3 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC4.31□□□□□ -1.72
CHAMP1Q96JM3 AC025423.5-201ENST00000550230 219 ntBASIC4.31□□□□□ -1.72
CHAMP1Q96JM3 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC4.31□□□□□ -1.72
CHAMP1Q96JM3 HMGB3P26-201ENST00000560051 582 ntBASIC4.31□□□□□ -1.72
CHAMP1Q96JM3 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC4.31□□□□□ -1.72
CHAMP1Q96JM3 RN7SL703P-201ENST00000578485 302 ntBASIC4.31□□□□□ -1.72
CHAMP1Q96JM3 MIR5195-201ENST00000583555 115 ntBASIC4.31□□□□□ -1.72
CHAMP1Q96JM3 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC4.31□□□□□ -1.72
CHAMP1Q96JM3 AC106900.2-201ENST00000604994 317 ntBASIC4.31□□□□□ -1.72
CHAMP1Q96JM3 MIR6500-201ENST00000622700 86 ntBASIC4.31□□□□□ -1.72
CHAMP1Q96JM3 AC092608.2-201ENST00000624427 218 ntBASIC4.31□□□□□ -1.72
CHAMP1Q96JM3 TTK-211ENST00000627129 240 ntTSL 5 BASIC4.31□□□□□ -1.72
CHAMP1Q96JM3 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
CHAMP1Q96JM3 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CHAMP1Q96JM3 AL365361.1-201ENST00000566942 3481 ntBASIC4.31□□□□□ -1.72
CHAMP1Q96JM3 SDAD1P2-201ENST00000441308 2028 ntBASIC4.31□□□□□ -1.72
CHAMP1Q96JM3 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
CHAMP1Q96JM3 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CHAMP1Q96JM3 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC4.3□□□□□ -1.72
CHAMP1Q96JM3 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CHAMP1Q96JM3 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC4.3□□□□□ -1.72
CHAMP1Q96JM3 USP33-201ENST00000357428 4155 ntTSL 5 BASIC4.3□□□□□ -1.72
CHAMP1Q96JM3 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC4.3□□□□□ -1.72
CHAMP1Q96JM3 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CHAMP1Q96JM3 SNORD62.1-201ENST00000362541 86 ntBASIC4.3□□□□□ -1.72
CHAMP1Q96JM3 RNA5SP235-201ENST00000365411 114 ntBASIC4.3□□□□□ -1.72
CHAMP1Q96JM3 RNU6-1032P-201ENST00000384100 107 ntBASIC4.3□□□□□ -1.72
CHAMP1Q96JM3 Y_RNA.480-201ENST00000384364 102 ntBASIC4.3□□□□□ -1.72
CHAMP1Q96JM3 SNORA75.6-201ENST00000391318 127 ntBASIC4.3□□□□□ -1.72
CHAMP1Q96JM3 AL356057.3-201ENST00000402607 340 ntBASIC4.3□□□□□ -1.72
CHAMP1Q96JM3 RPL23AP48-201ENST00000406913 488 ntBASIC4.3□□□□□ -1.72
CHAMP1Q96JM3 RNU2-3P-201ENST00000410144 191 ntBASIC4.3□□□□□ -1.72
CHAMP1Q96JM3 AL513331.1-201ENST00000411908 397 ntBASIC4.3□□□□□ -1.72
CHAMP1Q96JM3 TOMM22P1-201ENST00000418578 312 ntBASIC4.3□□□□□ -1.72
CHAMP1Q96JM3 AC087588.1-201ENST00000462203 316 ntBASIC4.3□□□□□ -1.72
CHAMP1Q96JM3 RPL31P60-201ENST00000478450 367 ntBASIC4.3□□□□□ -1.72
CHAMP1Q96JM3 VN1R104P-201ENST00000505115 1009 ntBASIC4.3□□□□□ -1.72
CHAMP1Q96JM3 RNA5SP471-201ENST00000516971 106 ntBASIC4.3□□□□□ -1.72
CHAMP1Q96JM3 SNORA31.20-201ENST00000517111 133 ntBASIC4.3□□□□□ -1.72
CHAMP1Q96JM3 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CHAMP1Q96JM3 FAM60BP-201ENST00000578364 658 ntBASIC4.3□□□□□ -1.72
CHAMP1Q96JM3 MIR4680-201ENST00000580906 66 ntBASIC4.3□□□□□ -1.72
CHAMP1Q96JM3 AC005000.2-201ENST00000605468 310 ntBASIC4.3□□□□□ -1.72
CHAMP1Q96JM3 PLCE1P1-201ENST00000622094 305 ntBASIC4.3□□□□□ -1.72
CHAMP1Q96JM3 FP236240.3-201ENST00000623061 327 ntBASIC4.3□□□□□ -1.72
CHAMP1Q96JM3 AC091925.1-201ENST00000623204 462 ntBASIC4.3□□□□□ -1.72
CHAMP1Q96JM3 PCNP-208ENST00000627393 136 ntTSL 2 BASIC4.3□□□□□ -1.72
CHAMP1Q96JM3 AL732372.2-225ENST00000642124 456 ntBASIC4.3□□□□□ -1.72
CHAMP1Q96JM3 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CHAMP1Q96JM3 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CHAMP1Q96JM3 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CHAMP1Q96JM3 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CHAMP1Q96JM3 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CHAMP1Q96JM3 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CHAMP1Q96JM3 RNA5SP42-201ENST00000364278 115 ntBASIC4.29□□□□□ -1.72
CHAMP1Q96JM3 Y_RNA.252-201ENST00000364556 101 ntBASIC4.29□□□□□ -1.72
CHAMP1Q96JM3 RNU6-463P-201ENST00000384340 107 ntBASIC4.29□□□□□ -1.72
CHAMP1Q96JM3 RNU6-607P-201ENST00000411283 108 ntBASIC4.29□□□□□ -1.72
CHAMP1Q96JM3 CYCSP33-201ENST00000414485 327 ntBASIC4.29□□□□□ -1.72
CHAMP1Q96JM3 HMGB1P27-201ENST00000431429 603 ntBASIC4.29□□□□□ -1.72
CHAMP1Q96JM3 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC4.29□□□□□ -1.72
CHAMP1Q96JM3 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.29□□□□□ -1.72
CHAMP1Q96JM3 AC096745.1-201ENST00000509945 370 ntBASIC4.29□□□□□ -1.72
CHAMP1Q96JM3 AC007991.1-201ENST00000522680 631 ntBASIC4.29□□□□□ -1.72
CHAMP1Q96JM3 AP004371.1-201ENST00000525240 214 ntBASIC4.29□□□□□ -1.72
CHAMP1Q96JM3 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC4.29□□□□□ -1.72
CHAMP1Q96JM3 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC4.29□□□□□ -1.72
CHAMP1Q96JM3 AC120057.2-201ENST00000571520 271 ntBASIC4.29□□□□□ -1.72
CHAMP1Q96JM3 LRRC37A5P-203ENST00000580181 585 ntBASIC4.29□□□□□ -1.72
CHAMP1Q96JM3 KLKP1-201ENST00000595979 403 ntBASIC4.29□□□□□ -1.72
CHAMP1Q96JM3 AC244505.7-201ENST00000599675 272 ntBASIC4.29□□□□□ -1.72
CHAMP1Q96JM3 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC4.29□□□□□ -1.72
CHAMP1Q96JM3 AL161423.1-201ENST00000613700 262 ntBASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 112.1 ms