Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
RFT1Q96AA3 AC027673.1-201ENST00000456245 405 ntBASIC2.62□□□□□ -1.99
RFT1Q96AA3 SNORA84-201ENST00000459229 133 ntBASIC2.62□□□□□ -1.99
RFT1Q96AA3 AL121769.1-201ENST00000469473 401 ntBASIC2.62□□□□□ -1.99
RFT1Q96AA3 AC107626.1-201ENST00000471084 183 ntBASIC2.62□□□□□ -1.99
RFT1Q96AA3 AC103975.1-201ENST00000482506 483 ntBASIC2.62□□□□□ -1.99
RFT1Q96AA3 AP002812.1-201ENST00000495378 474 ntBASIC2.62□□□□□ -1.99
RFT1Q96AA3 AC117522.1-201ENST00000509821 380 ntBASIC2.62□□□□□ -1.99
RFT1Q96AA3 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.62□□□□□ -1.99
RFT1Q96AA3 RNU6-506P-201ENST00000516553 94 ntBASIC2.62□□□□□ -1.99
RFT1Q96AA3 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
RFT1Q96AA3 ELOCP31-201ENST00000540463 467 ntBASIC2.62□□□□□ -1.99
RFT1Q96AA3 AC136619.2-201ENST00000563361 631 ntBASIC2.62□□□□□ -1.99
RFT1Q96AA3 AC137800.2-201ENST00000574375 120 ntBASIC2.62□□□□□ -1.99
RFT1Q96AA3 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
RFT1Q96AA3 MIR3158-1-201ENST00000583596 81 ntBASIC2.62□□□□□ -1.99
RFT1Q96AA3 AC011471.1-201ENST00000585766 187 ntBASIC2.62□□□□□ -1.99
RFT1Q96AA3 U6atac.1-201ENST00000616025 117 ntBASIC2.62□□□□□ -1.99
RFT1Q96AA3 AC006133.1-201ENST00000617106 264 ntBASIC2.62□□□□□ -1.99
RFT1Q96AA3 AC138649.3-201ENST00000622154 254 ntBASIC2.62□□□□□ -1.99
RFT1Q96AA3 AC103710.2-202ENST00000641454 2853 ntBASIC2.62□□□□□ -1.99
RFT1Q96AA3 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
RFT1Q96AA3 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC2.61□□□□□ -1.99
RFT1Q96AA3 Y_RNA.256-201ENST00000364594 104 ntBASIC2.61□□□□□ -1.99
RFT1Q96AA3 Y_RNA.303-201ENST00000364998 94 ntBASIC2.61□□□□□ -1.99
RFT1Q96AA3 Y_RNA.372-201ENST00000365599 102 ntBASIC2.61□□□□□ -1.99
RFT1Q96AA3 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
RFT1Q96AA3 MIR627-201ENST00000384979 97 ntBASIC2.61□□□□□ -1.99
RFT1Q96AA3 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.61□□□□□ -1.99
RFT1Q96AA3 RPL17P50-201ENST00000396131 546 ntBASIC2.61□□□□□ -1.99
RFT1Q96AA3 EIF4EBP2P3-201ENST00000403144 334 ntBASIC2.61□□□□□ -1.99
RFT1Q96AA3 AL122016.1-201ENST00000403365 367 ntBASIC2.61□□□□□ -1.99
RFT1Q96AA3 RNU2-49P-201ENST00000410666 184 ntBASIC2.61□□□□□ -1.99
RFT1Q96AA3 RNU2-25P-201ENST00000411041 191 ntBASIC2.61□□□□□ -1.99
RFT1Q96AA3 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC2.61□□□□□ -1.99
RFT1Q96AA3 AC022028.1-201ENST00000412054 408 ntBASIC2.61□□□□□ -1.99
RFT1Q96AA3 C1DP2-201ENST00000418167 426 ntBASIC2.61□□□□□ -1.99
RFT1Q96AA3 EIF1P1-201ENST00000421436 341 ntBASIC2.61□□□□□ -1.99
RFT1Q96AA3 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC2.61□□□□□ -1.99
RFT1Q96AA3 ISCA1P6-201ENST00000427740 390 ntBASIC2.61□□□□□ -1.99
RFT1Q96AA3 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.61□□□□□ -1.99
RFT1Q96AA3 AL358934.1-201ENST00000432346 324 ntBASIC2.61□□□□□ -1.99
RFT1Q96AA3 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC2.61□□□□□ -1.99
RFT1Q96AA3 RPS15AP27-201ENST00000449183 343 ntBASIC2.61□□□□□ -1.99
RFT1Q96AA3 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC2.61□□□□□ -1.99
RFT1Q96AA3 AC128713.1-201ENST00000471495 306 ntBASIC2.61□□□□□ -1.99
RFT1Q96AA3 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC2.61□□□□□ -1.99
RFT1Q96AA3 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC2.61□□□□□ -1.99
RFT1Q96AA3 AC108043.1-201ENST00000512696 574 ntBASIC2.61□□□□□ -1.99
RFT1Q96AA3 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.61□□□□□ -1.99
RFT1Q96AA3 Y_RNA.689-201ENST00000516589 107 ntBASIC2.61□□□□□ -1.99
RFT1Q96AA3 RPPH1-2P-201ENST00000516688 293 ntBASIC2.61□□□□□ -1.99
RFT1Q96AA3 AC107016.2-201ENST00000547968 190 ntBASIC2.61□□□□□ -1.99
RFT1Q96AA3 AL157871.3-201ENST00000557231 293 ntBASIC2.61□□□□□ -1.99
RFT1Q96AA3 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.61□□□□□ -1.99
RFT1Q96AA3 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC2.61□□□□□ -1.99
RFT1Q96AA3 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC2.61□□□□□ -1.99
RFT1Q96AA3 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC2.61□□□□□ -1.99
RFT1Q96AA3 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2.61□□□□□ -1.99
RFT1Q96AA3 RPL12P50-201ENST00000603116 116 ntBASIC2.61□□□□□ -1.99
RFT1Q96AA3 AL355877.2-201ENST00000603670 358 ntBASIC2.61□□□□□ -1.99
RFT1Q96AA3 AC245014.2-201ENST00000603689 287 ntBASIC2.61□□□□□ -1.99
RFT1Q96AA3 AC246785.4-201ENST00000605374 287 ntBASIC2.61□□□□□ -1.99
RFT1Q96AA3 MIR15A-201ENST00000607334 83 ntBASIC2.61□□□□□ -1.99
RFT1Q96AA3 AL161734.1-201ENST00000609720 557 ntBASIC2.61□□□□□ -1.99
RFT1Q96AA3 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC2.61□□□□□ -1.99
RFT1Q96AA3 AC012409.4-201ENST00000612923 249 ntBASIC2.61□□□□□ -1.99
RFT1Q96AA3 AL359547.2-201ENST00000615810 418 ntBASIC2.61□□□□□ -1.99
RFT1Q96AA3 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC2.61□□□□□ -1.99
RFT1Q96AA3 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC2.61□□□□□ -1.99
RFT1Q96AA3 U6.105-201ENST00000637379 88 ntBASIC2.61□□□□□ -1.99
RFT1Q96AA3 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
RFT1Q96AA3 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.61□□□□□ -1.99
RFT1Q96AA3 MTND4P35-201ENST00000604257 1375 ntBASIC2.61□□□□□ -1.99
RFT1Q96AA3 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC2.6□□□□□ -1.99
RFT1Q96AA3 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC2.6□□□□□ -1.99
RFT1Q96AA3 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC2.6□□□□□ -1.99
RFT1Q96AA3 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
RFT1Q96AA3 RNA5SP393-201ENST00000363423 117 ntBASIC2.6□□□□□ -1.99
RFT1Q96AA3 SNORA4.3-201ENST00000365564 137 ntBASIC2.6□□□□□ -1.99
RFT1Q96AA3 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC2.6□□□□□ -1.99
RFT1Q96AA3 RNU6-641P-201ENST00000384006 107 ntBASIC2.6□□□□□ -1.99
RFT1Q96AA3 SNORA24.1-201ENST00000384401 135 ntBASIC2.6□□□□□ -1.99
RFT1Q96AA3 RNU6-658P-201ENST00000384606 106 ntBASIC2.6□□□□□ -1.99
RFT1Q96AA3 AL513475.1-201ENST00000406602 315 ntBASIC2.6□□□□□ -1.99
RFT1Q96AA3 AC114491.1-201ENST00000416095 246 ntBASIC2.6□□□□□ -1.99
RFT1Q96AA3 BX295541.1-201ENST00000417774 250 ntBASIC2.6□□□□□ -1.99
RFT1Q96AA3 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC2.6□□□□□ -1.99
RFT1Q96AA3 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC2.6□□□□□ -1.99
RFT1Q96AA3 AL158156.1-201ENST00000422509 473 ntBASIC2.6□□□□□ -1.99
RFT1Q96AA3 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC2.6□□□□□ -1.99
RFT1Q96AA3 MYL8P-204ENST00000431574 518 ntBASIC2.6□□□□□ -1.99
RFT1Q96AA3 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC2.6□□□□□ -1.99
RFT1Q96AA3 HMGN2P10-201ENST00000448085 265 ntBASIC2.6□□□□□ -1.99
RFT1Q96AA3 AC079448.1-201ENST00000449377 373 ntBASIC2.6□□□□□ -1.99
RFT1Q96AA3 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC2.6□□□□□ -1.99
RFT1Q96AA3 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC2.6□□□□□ -1.99
RFT1Q96AA3 MTCO3P38-201ENST00000468910 766 ntBASIC2.6□□□□□ -1.99
RFT1Q96AA3 AC109925.1-201ENST00000478069 331 ntBASIC2.6□□□□□ -1.99
RFT1Q96AA3 RN7SL297P-201ENST00000483161 293 ntBASIC2.6□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms