Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC3.53□□□□□ -1.84
ATG4AQ8WYN0 AL136097.1-201ENST00000456945 913 ntBASIC3.53□□□□□ -1.84
ATG4AQ8WYN0 AC087884.1-201ENST00000469738 328 ntBASIC3.53□□□□□ -1.84
ATG4AQ8WYN0 AL160314.1-201ENST00000490836 438 ntBASIC3.53□□□□□ -1.84
ATG4AQ8WYN0 AC079140.5-201ENST00000507882 310 ntBASIC3.53□□□□□ -1.84
ATG4AQ8WYN0 AC008526.1-201ENST00000509149 338 ntBASIC3.53□□□□□ -1.84
ATG4AQ8WYN0 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.53□□□□□ -1.84
ATG4AQ8WYN0 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC3.53□□□□□ -1.84
ATG4AQ8WYN0 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC3.53□□□□□ -1.84
ATG4AQ8WYN0 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.53□□□□□ -1.84
ATG4AQ8WYN0 AC007151.1-201ENST00000572774 483 ntBASIC3.53□□□□□ -1.84
ATG4AQ8WYN0 MIR1254-2-201ENST00000579553 63 ntBASIC3.53□□□□□ -1.84
ATG4AQ8WYN0 AC064836.2-201ENST00000609491 462 ntBASIC3.53□□□□□ -1.84
ATG4AQ8WYN0 AL121772.2-201ENST00000614331 297 ntBASIC3.53□□□□□ -1.84
ATG4AQ8WYN0 AC126177.8-201ENST00000618339 1015 ntBASIC3.53□□□□□ -1.84
ATG4AQ8WYN0 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.53□□□□□ -1.84
ATG4AQ8WYN0 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
ATG4AQ8WYN0 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
ATG4AQ8WYN0 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.53□□□□□ -1.84
ATG4AQ8WYN0 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
ATG4AQ8WYN0 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.85
ATG4AQ8WYN0 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.53□□□□□ -1.85
ATG4AQ8WYN0 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
ATG4AQ8WYN0 ZNF519P1-201ENST00000449011 1626 ntBASIC3.52□□□□□ -1.85
ATG4AQ8WYN0 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC3.52□□□□□ -1.85
ATG4AQ8WYN0 MFSD8-233ENST00000641482 4860 ntBASIC3.52□□□□□ -1.85
ATG4AQ8WYN0 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.52□□□□□ -1.85
ATG4AQ8WYN0 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.52□□□□□ -1.85
ATG4AQ8WYN0 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
ATG4AQ8WYN0 AC008568.2-201ENST00000623862 2313 ntBASIC3.52□□□□□ -1.85
ATG4AQ8WYN0 RNU1-75P-201ENST00000347264 129 ntBASIC3.52□□□□□ -1.85
ATG4AQ8WYN0 RNU6-266P-201ENST00000364225 107 ntBASIC3.52□□□□□ -1.85
ATG4AQ8WYN0 Y_RNA.259-201ENST00000364619 101 ntBASIC3.52□□□□□ -1.85
ATG4AQ8WYN0 RNU6-1303P-201ENST00000364841 107 ntBASIC3.52□□□□□ -1.85
ATG4AQ8WYN0 RNU2-33P-201ENST00000410344 192 ntBASIC3.52□□□□□ -1.85
ATG4AQ8WYN0 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC3.52□□□□□ -1.85
ATG4AQ8WYN0 CRYBB2P1-203ENST00000415709 538 ntBASIC3.52□□□□□ -1.85
ATG4AQ8WYN0 MTCO2P27-201ENST00000420740 428 ntBASIC3.52□□□□□ -1.85
ATG4AQ8WYN0 AF228730.4-201ENST00000421457 183 ntBASIC3.52□□□□□ -1.85
ATG4AQ8WYN0 MTCO2P12-201ENST00000427426 682 ntBASIC3.52□□□□□ -1.85
ATG4AQ8WYN0 AC017083.1-201ENST00000428093 483 ntBASIC3.52□□□□□ -1.85
ATG4AQ8WYN0 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.52□□□□□ -1.85
ATG4AQ8WYN0 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC3.52□□□□□ -1.85
ATG4AQ8WYN0 HMGN1P18-201ENST00000457642 277 ntBASIC3.52□□□□□ -1.85
ATG4AQ8WYN0 RPL23AP67-201ENST00000465341 474 ntBASIC3.52□□□□□ -1.85
ATG4AQ8WYN0 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC3.52□□□□□ -1.85
ATG4AQ8WYN0 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC3.52□□□□□ -1.85
ATG4AQ8WYN0 AC104619.4-201ENST00000510773 249 ntBASIC3.52□□□□□ -1.85
ATG4AQ8WYN0 RN7SKP24-201ENST00000515888 284 ntBASIC3.52□□□□□ -1.85
ATG4AQ8WYN0 RNU6-323P-201ENST00000521915 107 ntBASIC3.52□□□□□ -1.85
ATG4AQ8WYN0 AP005597.4-201ENST00000526762 229 ntBASIC3.52□□□□□ -1.85
ATG4AQ8WYN0 AP004242.1-201ENST00000533701 349 ntBASIC3.52□□□□□ -1.85
ATG4AQ8WYN0 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.52□□□□□ -1.85
ATG4AQ8WYN0 IMMP1LP2-201ENST00000552954 492 ntBASIC3.52□□□□□ -1.85
ATG4AQ8WYN0 AL442663.2-201ENST00000554385 511 ntBASIC3.52□□□□□ -1.85
ATG4AQ8WYN0 AC005476.1-201ENST00000554427 397 ntBASIC3.52□□□□□ -1.85
ATG4AQ8WYN0 AL157871.3-201ENST00000557231 293 ntBASIC3.52□□□□□ -1.85
ATG4AQ8WYN0 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.52□□□□□ -1.85
ATG4AQ8WYN0 MIR1273C-201ENST00000578669 77 ntBASIC3.52□□□□□ -1.85
ATG4AQ8WYN0 AC093227.2-201ENST00000589357 285 ntBASIC3.52□□□□□ -1.85
ATG4AQ8WYN0 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.52□□□□□ -1.85
ATG4AQ8WYN0 AC002044.1-201ENST00000606707 158 ntBASIC3.52□□□□□ -1.85
ATG4AQ8WYN0 AL359757.2-201ENST00000624309 274 ntBASIC3.52□□□□□ -1.85
ATG4AQ8WYN0 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.52□□□□□ -1.85
ATG4AQ8WYN0 AC007496.3-201ENST00000624987 3443 ntBASIC3.52□□□□□ -1.85
ATG4AQ8WYN0 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
ATG4AQ8WYN0 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.52□□□□□ -1.85
ATG4AQ8WYN0 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
ATG4AQ8WYN0 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC3.52□□□□□ -1.85
ATG4AQ8WYN0 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
ATG4AQ8WYN0 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
ATG4AQ8WYN0 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.51□□□□□ -1.85
ATG4AQ8WYN0 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
ATG4AQ8WYN0 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.51□□□□□ -1.85
ATG4AQ8WYN0 Y_RNA.245-201ENST00000364493 95 ntBASIC3.51□□□□□ -1.85
ATG4AQ8WYN0 MDM4-202ENST00000367180 547 ntTSL 3 BASIC3.51□□□□□ -1.85
ATG4AQ8WYN0 SNORD116-29-201ENST00000384516 83 ntBASIC3.51□□□□□ -1.85
ATG4AQ8WYN0 AC005534.2-201ENST00000431047 433 ntBASIC3.51□□□□□ -1.85
ATG4AQ8WYN0 SNAP23P1-201ENST00000433229 246 ntBASIC3.51□□□□□ -1.85
ATG4AQ8WYN0 FABP5P15-201ENST00000453566 214 ntBASIC3.51□□□□□ -1.85
ATG4AQ8WYN0 AC025518.1-201ENST00000479856 347 ntBASIC3.51□□□□□ -1.85
ATG4AQ8WYN0 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC3.51□□□□□ -1.85
ATG4AQ8WYN0 MTND3P25-201ENST00000509243 135 ntBASIC3.51□□□□□ -1.85
ATG4AQ8WYN0 AC008716.1-201ENST00000511084 513 ntBASIC3.51□□□□□ -1.85
ATG4AQ8WYN0 RN7SKP13-201ENST00000515933 244 ntBASIC3.51□□□□□ -1.85
ATG4AQ8WYN0 UTP23-205ENST00000520733 369 ntTSL 3 BASIC3.51□□□□□ -1.85
ATG4AQ8WYN0 AP003122.3-201ENST00000526316 255 ntBASIC3.51□□□□□ -1.85
ATG4AQ8WYN0 AC084851.1-201ENST00000529105 249 ntBASIC3.51□□□□□ -1.85
ATG4AQ8WYN0 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC3.51□□□□□ -1.85
ATG4AQ8WYN0 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.51□□□□□ -1.85
ATG4AQ8WYN0 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.51□□□□□ -1.85
ATG4AQ8WYN0 LRRC37A5P-203ENST00000580181 585 ntBASIC3.51□□□□□ -1.85
ATG4AQ8WYN0 AC106900.2-201ENST00000604994 317 ntBASIC3.51□□□□□ -1.85
ATG4AQ8WYN0 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.51□□□□□ -1.85
ATG4AQ8WYN0 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC3.51□□□□□ -1.85
ATG4AQ8WYN0 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC3.51□□□□□ -1.85
ATG4AQ8WYN0 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
ATG4AQ8WYN0 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
ATG4AQ8WYN0 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
ATG4AQ8WYN0 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms