Protein–RNA interactions for Protein: Q8NCR9

CLRN3, Clarin-3, humanhuman

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN3Q8NCR9 RNU2-49P-201ENST00000410666 184 ntBASIC3.56□□□□□ -1.84
CLRN3Q8NCR9 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC3.56□□□□□ -1.84
CLRN3Q8NCR9 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC3.56□□□□□ -1.84
CLRN3Q8NCR9 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.56□□□□□ -1.84
CLRN3Q8NCR9 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CLRN3Q8NCR9 AC099799.1-201ENST00000439809 192 ntBASIC3.56□□□□□ -1.84
CLRN3Q8NCR9 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC3.56□□□□□ -1.84
CLRN3Q8NCR9 RN7SL93P-201ENST00000463035 293 ntBASIC3.56□□□□□ -1.84
CLRN3Q8NCR9 RN7SL738P-201ENST00000470264 297 ntBASIC3.56□□□□□ -1.84
CLRN3Q8NCR9 RN7SL481P-201ENST00000477764 299 ntBASIC3.56□□□□□ -1.84
CLRN3Q8NCR9 RPL17P19-201ENST00000489069 552 ntBASIC3.56□□□□□ -1.84
CLRN3Q8NCR9 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC3.56□□□□□ -1.84
CLRN3Q8NCR9 AC097462.2-201ENST00000504623 481 ntBASIC3.56□□□□□ -1.84
CLRN3Q8NCR9 AC093840.1-201ENST00000511599 336 ntBASIC3.56□□□□□ -1.84
CLRN3Q8NCR9 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC3.56□□□□□ -1.84
CLRN3Q8NCR9 IGKV2-23-201ENST00000518729 323 ntBASIC3.56□□□□□ -1.84
CLRN3Q8NCR9 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC3.56□□□□□ -1.84
CLRN3Q8NCR9 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC3.56□□□□□ -1.84
CLRN3Q8NCR9 SUB1P3-201ENST00000564581 315 ntBASIC3.56□□□□□ -1.84
CLRN3Q8NCR9 OR7E18P-201ENST00000592589 702 ntBASIC3.56□□□□□ -1.84
CLRN3Q8NCR9 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC3.56□□□□□ -1.84
CLRN3Q8NCR9 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC3.56□□□□□ -1.84
CLRN3Q8NCR9 AC092628.2-201ENST00000622492 339 ntBASIC3.56□□□□□ -1.84
CLRN3Q8NCR9 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.56□□□□□ -1.84
CLRN3Q8NCR9 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CLRN3Q8NCR9 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CLRN3Q8NCR9 MAPK10-373ENST00000641983 6772 ntBASIC3.56□□□□□ -1.84
CLRN3Q8NCR9 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CLRN3Q8NCR9 MTND5P30-201ENST00000452896 1731 ntBASIC3.56□□□□□ -1.84
CLRN3Q8NCR9 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.56□□□□□ -1.84
CLRN3Q8NCR9 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.55□□□□□ -1.84
CLRN3Q8NCR9 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.55□□□□□ -1.84
CLRN3Q8NCR9 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.55□□□□□ -1.84
CLRN3Q8NCR9 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CLRN3Q8NCR9 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
CLRN3Q8NCR9 Y_RNA.5-201ENST00000362334 102 ntBASIC3.55□□□□□ -1.84
CLRN3Q8NCR9 Y_RNA.28-201ENST00000362554 111 ntBASIC3.55□□□□□ -1.84
CLRN3Q8NCR9 Y_RNA.428-201ENST00000384078 102 ntBASIC3.55□□□□□ -1.84
CLRN3Q8NCR9 RNU6-784P-201ENST00000384330 106 ntBASIC3.55□□□□□ -1.84
CLRN3Q8NCR9 MIR600-201ENST00000385007 98 ntBASIC3.55□□□□□ -1.84
CLRN3Q8NCR9 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
CLRN3Q8NCR9 RNU6-750P-201ENST00000390946 107 ntBASIC3.55□□□□□ -1.84
CLRN3Q8NCR9 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
CLRN3Q8NCR9 AC009804.1-201ENST00000400949 179 ntBASIC3.55□□□□□ -1.84
CLRN3Q8NCR9 SNORA11.3-201ENST00000408471 128 ntBASIC3.55□□□□□ -1.84
CLRN3Q8NCR9 RNA5SP36-201ENST00000410197 133 ntBASIC3.55□□□□□ -1.84
CLRN3Q8NCR9 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.55□□□□□ -1.84
CLRN3Q8NCR9 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.55□□□□□ -1.84
CLRN3Q8NCR9 AC011933.1-201ENST00000413334 321 ntBASIC3.55□□□□□ -1.84
CLRN3Q8NCR9 AC140479.3-201ENST00000418944 1126 ntBASIC3.55□□□□□ -1.84
CLRN3Q8NCR9 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.55□□□□□ -1.84
CLRN3Q8NCR9 AC243428.1-201ENST00000421099 264 ntBASIC3.55□□□□□ -1.84
CLRN3Q8NCR9 AC018865.2-201ENST00000423631 129 ntBASIC3.55□□□□□ -1.84
CLRN3Q8NCR9 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC3.55□□□□□ -1.84
CLRN3Q8NCR9 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC3.55□□□□□ -1.84
CLRN3Q8NCR9 FO393415.2-201ENST00000480085 343 ntBASIC3.55□□□□□ -1.84
CLRN3Q8NCR9 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.55□□□□□ -1.84
CLRN3Q8NCR9 AC022447.4-201ENST00000504053 364 ntBASIC3.55□□□□□ -1.84
CLRN3Q8NCR9 AKIRIN2P1-201ENST00000505898 352 ntBASIC3.55□□□□□ -1.84
CLRN3Q8NCR9 BTF3L4P4-201ENST00000506381 449 ntBASIC3.55□□□□□ -1.84
CLRN3Q8NCR9 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC3.55□□□□□ -1.84
CLRN3Q8NCR9 CKS1BP7-201ENST00000522230 235 ntBASIC3.55□□□□□ -1.84
CLRN3Q8NCR9 CBX3P8-201ENST00000532412 525 ntBASIC3.55□□□□□ -1.84
CLRN3Q8NCR9 TVP23CP2-201ENST00000571473 623 ntBASIC3.55□□□□□ -1.84
CLRN3Q8NCR9 MIR3186-201ENST00000577404 85 ntBASIC3.55□□□□□ -1.84
CLRN3Q8NCR9 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC3.55□□□□□ -1.84
CLRN3Q8NCR9 AL591034.3-201ENST00000605511 685 ntBASIC3.55□□□□□ -1.84
CLRN3Q8NCR9 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.55□□□□□ -1.84
CLRN3Q8NCR9 PART1_1.1-201ENST00000611761 217 ntBASIC3.55□□□□□ -1.84
CLRN3Q8NCR9 HMGB1P24-202ENST00000615653 685 ntBASIC3.55□□□□□ -1.84
CLRN3Q8NCR9 SNORA11.6-201ENST00000619030 128 ntBASIC3.55□□□□□ -1.84
CLRN3Q8NCR9 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.55□□□□□ -1.84
CLRN3Q8NCR9 AL049767.1-202ENST00000637826 242 ntBASIC3.55□□□□□ -1.84
CLRN3Q8NCR9 AC008669.1-201ENST00000565823 2178 ntBASIC3.55□□□□□ -1.84
CLRN3Q8NCR9 AC032011.1-201ENST00000611703 1549 ntBASIC3.54□□□□□ -1.84
CLRN3Q8NCR9 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CLRN3Q8NCR9 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.54□□□□□ -1.84
CLRN3Q8NCR9 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC3.54□□□□□ -1.84
CLRN3Q8NCR9 AC010889.1-201ENST00000566193 2666 ntBASIC3.54□□□□□ -1.84
CLRN3Q8NCR9 RN7SKP95-201ENST00000362860 303 ntBASIC3.54□□□□□ -1.84
CLRN3Q8NCR9 RN7SKP115-201ENST00000363177 317 ntBASIC3.54□□□□□ -1.84
CLRN3Q8NCR9 Y_RNA.162-201ENST00000363683 102 ntBASIC3.54□□□□□ -1.84
CLRN3Q8NCR9 RNU1-64P-201ENST00000365443 163 ntBASIC3.54□□□□□ -1.84
CLRN3Q8NCR9 RNU6-692P-201ENST00000384496 107 ntBASIC3.54□□□□□ -1.84
CLRN3Q8NCR9 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
CLRN3Q8NCR9 PTMAP5-201ENST00000393073 333 ntBASIC3.54□□□□□ -1.84
CLRN3Q8NCR9 AL590762.2-201ENST00000395798 571 ntBASIC3.54□□□□□ -1.84
CLRN3Q8NCR9 RNU6ATAC18P-201ENST00000408413 101 ntBASIC3.54□□□□□ -1.84
CLRN3Q8NCR9 PMCHL1-202ENST00000423102 261 ntBASIC3.54□□□□□ -1.84
CLRN3Q8NCR9 AC108075.1-201ENST00000424692 529 ntBASIC3.54□□□□□ -1.84
CLRN3Q8NCR9 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.54□□□□□ -1.84
CLRN3Q8NCR9 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.54□□□□□ -1.84
CLRN3Q8NCR9 AL390119.1-201ENST00000440329 312 ntBASIC3.54□□□□□ -1.84
CLRN3Q8NCR9 AC243964.1-201ENST00000441814 261 ntBASIC3.54□□□□□ -1.84
CLRN3Q8NCR9 AC007969.2-201ENST00000441891 191 ntBASIC3.54□□□□□ -1.84
CLRN3Q8NCR9 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC3.54□□□□□ -1.84
CLRN3Q8NCR9 RPS5P7-201ENST00000456664 608 ntBASIC3.54□□□□□ -1.84
CLRN3Q8NCR9 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.54□□□□□ -1.84
CLRN3Q8NCR9 AC006517.1-201ENST00000480485 328 ntBASIC3.54□□□□□ -1.84
CLRN3Q8NCR9 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms