Protein–RNA interactions for Protein: Q8N8U3

RTL3, Retrotransposon Gag-like protein 3, humanhuman

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL3Q8N8U3 RNU5F-8P-201ENST00000515941 111 ntBASIC2.74□□□□□ -1.97
RTL3Q8N8U3 RNA5SP356-201ENST00000515972 94 ntBASIC2.74□□□□□ -1.97
RTL3Q8N8U3 AC107934.1-201ENST00000522215 217 ntBASIC2.74□□□□□ -1.97
RTL3Q8N8U3 AP003181.2-201ENST00000528941 181 ntBASIC2.74□□□□□ -1.97
RTL3Q8N8U3 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC2.74□□□□□ -1.97
RTL3Q8N8U3 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC2.74□□□□□ -1.97
RTL3Q8N8U3 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC2.74□□□□□ -1.97
RTL3Q8N8U3 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC2.74□□□□□ -1.97
RTL3Q8N8U3 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.74□□□□□ -1.97
RTL3Q8N8U3 MTND1P15-201ENST00000579262 949 ntBASIC2.74□□□□□ -1.97
RTL3Q8N8U3 AC024619.4-201ENST00000580924 316 ntBASIC2.74□□□□□ -1.97
RTL3Q8N8U3 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC2.74□□□□□ -1.97
RTL3Q8N8U3 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC2.74□□□□□ -1.97
RTL3Q8N8U3 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC2.74□□□□□ -1.97
RTL3Q8N8U3 AC091805.2-201ENST00000603848 235 ntBASIC2.74□□□□□ -1.97
RTL3Q8N8U3 AC008250.2-201ENST00000615261 205 ntBASIC2.74□□□□□ -1.97
RTL3Q8N8U3 AC015540.1-201ENST00000615828 501 ntBASIC2.74□□□□□ -1.97
RTL3Q8N8U3 FRG1KP-201ENST00000623592 341 ntBASIC2.74□□□□□ -1.97
RTL3Q8N8U3 AC091953.2-201ENST00000623979 160 ntBASIC2.74□□□□□ -1.97
RTL3Q8N8U3 PISRT1-201ENST00000626175 531 ntBASIC2.74□□□□□ -1.97
RTL3Q8N8U3 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
RTL3Q8N8U3 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
RTL3Q8N8U3 AC004520.1-201ENST00000608362 1413 ntBASIC2.74□□□□□ -1.97
RTL3Q8N8U3 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC2.74□□□□□ -1.97
RTL3Q8N8U3 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
RTL3Q8N8U3 RNU6-859P-201ENST00000362728 107 ntBASIC2.73□□□□□ -1.97
RTL3Q8N8U3 RNU6-1083P-201ENST00000384022 107 ntBASIC2.73□□□□□ -1.97
RTL3Q8N8U3 RNU6-701P-201ENST00000384059 107 ntBASIC2.73□□□□□ -1.97
RTL3Q8N8U3 AL139397.2-201ENST00000404529 772 ntBASIC2.73□□□□□ -1.97
RTL3Q8N8U3 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.73□□□□□ -1.97
RTL3Q8N8U3 AL353729.1-201ENST00000425044 720 ntBASIC2.73□□□□□ -1.97
RTL3Q8N8U3 ISCA1P1-201ENST00000426679 387 ntBASIC2.73□□□□□ -1.97
RTL3Q8N8U3 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC2.73□□□□□ -1.97
RTL3Q8N8U3 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC2.73□□□□□ -1.97
RTL3Q8N8U3 MTND1P12-201ENST00000455231 147 ntBASIC2.73□□□□□ -1.97
RTL3Q8N8U3 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC2.73□□□□□ -1.97
RTL3Q8N8U3 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC2.73□□□□□ -1.97
RTL3Q8N8U3 RN7SL297P-201ENST00000483161 293 ntBASIC2.73□□□□□ -1.97
RTL3Q8N8U3 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC2.73□□□□□ -1.97
RTL3Q8N8U3 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC2.73□□□□□ -1.97
RTL3Q8N8U3 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC2.73□□□□□ -1.97
RTL3Q8N8U3 NDUFB4P2-201ENST00000509515 391 ntBASIC2.73□□□□□ -1.97
RTL3Q8N8U3 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.73□□□□□ -1.97
RTL3Q8N8U3 AC091133.4-201ENST00000511142 308 ntBASIC2.73□□□□□ -1.97
RTL3Q8N8U3 SNORA31.3-201ENST00000516029 96 ntBASIC2.73□□□□□ -1.97
RTL3Q8N8U3 Y_RNA.672-201ENST00000516289 104 ntBASIC2.73□□□□□ -1.97
RTL3Q8N8U3 MTCO2P4-201ENST00000517968 247 ntBASIC2.73□□□□□ -1.97
RTL3Q8N8U3 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC2.73□□□□□ -1.97
RTL3Q8N8U3 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC2.73□□□□□ -1.97
RTL3Q8N8U3 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC2.73□□□□□ -1.97
RTL3Q8N8U3 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC2.73□□□□□ -1.97
RTL3Q8N8U3 AC009063.1-201ENST00000563342 702 ntBASIC2.73□□□□□ -1.97
RTL3Q8N8U3 MTCO3P13-201ENST00000577757 781 ntBASIC2.73□□□□□ -1.97
RTL3Q8N8U3 MIR3146-201ENST00000580367 79 ntBASIC2.73□□□□□ -1.97
RTL3Q8N8U3 MIR4635-201ENST00000583759 79 ntBASIC2.73□□□□□ -1.97
RTL3Q8N8U3 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC2.73□□□□□ -1.97
RTL3Q8N8U3 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC2.73□□□□□ -1.97
RTL3Q8N8U3 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.73□□□□□ -1.97
RTL3Q8N8U3 AL670379.6-201ENST00000603753 252 ntBASIC2.73□□□□□ -1.97
RTL3Q8N8U3 AC080078.2-201ENST00000603766 501 ntBASIC2.73□□□□□ -1.97
RTL3Q8N8U3 AL670379.11-201ENST00000604059 253 ntBASIC2.73□□□□□ -1.97
RTL3Q8N8U3 AC008162.1-201ENST00000604718 254 ntBASIC2.73□□□□□ -1.97
RTL3Q8N8U3 AL670379.1-201ENST00000604752 252 ntBASIC2.73□□□□□ -1.97
RTL3Q8N8U3 AL670379.5-201ENST00000605253 252 ntBASIC2.73□□□□□ -1.97
RTL3Q8N8U3 AL670379.12-201ENST00000605291 253 ntBASIC2.73□□□□□ -1.97
RTL3Q8N8U3 AL670379.8-201ENST00000605353 252 ntBASIC2.73□□□□□ -1.97
RTL3Q8N8U3 AL670379.7-201ENST00000605823 252 ntBASIC2.73□□□□□ -1.97
RTL3Q8N8U3 AC010149.2-201ENST00000637608 315 ntBASIC2.73□□□□□ -1.97
RTL3Q8N8U3 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.73□□□□□ -1.97
RTL3Q8N8U3 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.72□□□□□ -1.97
RTL3Q8N8U3 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
RTL3Q8N8U3 AC135776.4-201ENST00000624300 1904 ntBASIC2.72□□□□□ -1.97
RTL3Q8N8U3 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC2.72□□□□□ -1.97
RTL3Q8N8U3 RNU6-658P-201ENST00000384606 106 ntBASIC2.72□□□□□ -1.97
RTL3Q8N8U3 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
RTL3Q8N8U3 Y_RNA.582-201ENST00000391023 95 ntBASIC2.72□□□□□ -1.97
RTL3Q8N8U3 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC2.72□□□□□ -1.97
RTL3Q8N8U3 MTND3P17-201ENST00000416968 344 ntBASIC2.72□□□□□ -1.97
RTL3Q8N8U3 AL139281.1-201ENST00000422120 335 ntBASIC2.72□□□□□ -1.97
RTL3Q8N8U3 RAC1P6-201ENST00000423911 575 ntBASIC2.72□□□□□ -1.97
RTL3Q8N8U3 AC019097.1-201ENST00000424783 735 ntBASIC2.72□□□□□ -1.97
RTL3Q8N8U3 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC2.72□□□□□ -1.97
RTL3Q8N8U3 MTND1P34-201ENST00000438556 671 ntBASIC2.72□□□□□ -1.97
RTL3Q8N8U3 MTND4P25-201ENST00000441039 533 ntBASIC2.72□□□□□ -1.97
RTL3Q8N8U3 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC2.72□□□□□ -1.97
RTL3Q8N8U3 NEFMP1-201ENST00000443423 1006 ntBASIC2.72□□□□□ -1.97
RTL3Q8N8U3 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC2.72□□□□□ -1.97
RTL3Q8N8U3 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.72□□□□□ -1.97
RTL3Q8N8U3 SNORD97-201ENST00000459187 142 ntBASIC2.72□□□□□ -1.97
RTL3Q8N8U3 AC107626.1-201ENST00000471084 183 ntBASIC2.72□□□□□ -1.97
RTL3Q8N8U3 RN7SL499P-201ENST00000481141 276 ntBASIC2.72□□□□□ -1.97
RTL3Q8N8U3 MTND1P3-201ENST00000484956 952 ntBASIC2.72□□□□□ -1.97
RTL3Q8N8U3 AC026801.1-201ENST00000497178 464 ntBASIC2.72□□□□□ -1.97
RTL3Q8N8U3 EIF4EP3-201ENST00000498782 656 ntBASIC2.72□□□□□ -1.97
RTL3Q8N8U3 AIG1P1-201ENST00000503376 148 ntBASIC2.72□□□□□ -1.97
RTL3Q8N8U3 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC2.72□□□□□ -1.97
RTL3Q8N8U3 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC2.72□□□□□ -1.97
RTL3Q8N8U3 SNORA18.6-201ENST00000516792 115 ntBASIC2.72□□□□□ -1.97
RTL3Q8N8U3 RNU6-143P-201ENST00000516942 93 ntBASIC2.72□□□□□ -1.97
RTL3Q8N8U3 AP006587.4-201ENST00000526053 529 ntBASIC2.72□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 112.3 ms