Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 MIR219B-201ENST00000637023 88 ntBASIC2.28□□□□□ -2.04
CCDC65Q8IXS2 AC010889.1-201ENST00000566193 2666 ntBASIC2.28□□□□□ -2.04
CCDC65Q8IXS2 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
CCDC65Q8IXS2 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC2.27□□□□□ -2.05
CCDC65Q8IXS2 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.27□□□□□ -2.05
CCDC65Q8IXS2 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
CCDC65Q8IXS2 RNA5SP160-201ENST00000364866 120 ntBASIC2.27□□□□□ -2.05
CCDC65Q8IXS2 U8.14-201ENST00000390843 143 ntBASIC2.27□□□□□ -2.05
CCDC65Q8IXS2 RNU6-278P-201ENST00000390945 109 ntBASIC2.27□□□□□ -2.05
CCDC65Q8IXS2 AL023284.1-201ENST00000403956 276 ntBASIC2.27□□□□□ -2.05
CCDC65Q8IXS2 RNU2-68P-201ENST00000410878 191 ntBASIC2.27□□□□□ -2.05
CCDC65Q8IXS2 RPL26P27-201ENST00000414397 437 ntBASIC2.27□□□□□ -2.05
CCDC65Q8IXS2 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC2.27□□□□□ -2.05
CCDC65Q8IXS2 AC098592.1-201ENST00000419352 333 ntBASIC2.27□□□□□ -2.05
CCDC65Q8IXS2 MED14P1-201ENST00000430517 648 ntBASIC2.27□□□□□ -2.05
CCDC65Q8IXS2 GPM6BP2-201ENST00000432046 144 ntBASIC2.27□□□□□ -2.05
CCDC65Q8IXS2 AL354941.1-201ENST00000438600 464 ntBASIC2.27□□□□□ -2.05
CCDC65Q8IXS2 GPM6BP1-201ENST00000446387 144 ntBASIC2.27□□□□□ -2.05
CCDC65Q8IXS2 RPL23AP7-203ENST00000449021 469 ntBASIC2.27□□□□□ -2.05
CCDC65Q8IXS2 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC2.27□□□□□ -2.05
CCDC65Q8IXS2 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.27□□□□□ -2.05
CCDC65Q8IXS2 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC2.27□□□□□ -2.05
CCDC65Q8IXS2 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC2.27□□□□□ -2.05
CCDC65Q8IXS2 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC2.27□□□□□ -2.05
CCDC65Q8IXS2 AC107934.1-201ENST00000522215 217 ntBASIC2.27□□□□□ -2.05
CCDC65Q8IXS2 IGKV3-31-201ENST00000523109 329 ntBASIC2.27□□□□□ -2.05
CCDC65Q8IXS2 OR5AQ1P-201ENST00000527596 927 ntBASIC2.27□□□□□ -2.05
CCDC65Q8IXS2 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC2.27□□□□□ -2.05
CCDC65Q8IXS2 ARL2BPP2-201ENST00000550907 489 ntBASIC2.27□□□□□ -2.05
CCDC65Q8IXS2 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC2.27□□□□□ -2.05
CCDC65Q8IXS2 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC2.27□□□□□ -2.05
CCDC65Q8IXS2 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC2.27□□□□□ -2.05
CCDC65Q8IXS2 AC103710.2-201ENST00000609912 942 ntBASIC2.27□□□□□ -2.05
CCDC65Q8IXS2 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC2.27□□□□□ -2.05
CCDC65Q8IXS2 AC104010.1-201ENST00000616889 150 ntBASIC2.27□□□□□ -2.05
CCDC65Q8IXS2 AC007490.1-201ENST00000624321 703 ntBASIC2.27□□□□□ -2.05
CCDC65Q8IXS2 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
CCDC65Q8IXS2 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
CCDC65Q8IXS2 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
CCDC65Q8IXS2 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
CCDC65Q8IXS2 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
CCDC65Q8IXS2 OR56A5-201ENST00000340110 738 ntBASIC2.26□□□□□ -2.05
CCDC65Q8IXS2 Y_RNA.18-201ENST00000362461 102 ntBASIC2.26□□□□□ -2.05
CCDC65Q8IXS2 RNY4P24-201ENST00000362735 96 ntBASIC2.26□□□□□ -2.05
CCDC65Q8IXS2 RNU6-511P-201ENST00000363496 107 ntBASIC2.26□□□□□ -2.05
CCDC65Q8IXS2 SNORA67.3-201ENST00000384366 140 ntBASIC2.26□□□□□ -2.05
CCDC65Q8IXS2 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
CCDC65Q8IXS2 AL021407.1-201ENST00000404531 386 ntBASIC2.26□□□□□ -2.05
CCDC65Q8IXS2 RPL23AP39-201ENST00000415533 405 ntBASIC2.26□□□□□ -2.05
CCDC65Q8IXS2 AC096649.2-201ENST00000416186 393 ntBASIC2.26□□□□□ -2.05
CCDC65Q8IXS2 AL353777.1-201ENST00000425552 326 ntBASIC2.26□□□□□ -2.05
CCDC65Q8IXS2 HMGB1P9-201ENST00000429856 646 ntBASIC2.26□□□□□ -2.05
CCDC65Q8IXS2 Z80107.1-201ENST00000436830 412 ntBASIC2.26□□□□□ -2.05
CCDC65Q8IXS2 USP9YP8-201ENST00000441913 500 ntBASIC2.26□□□□□ -2.05
CCDC65Q8IXS2 HMGN2P10-201ENST00000448085 265 ntBASIC2.26□□□□□ -2.05
CCDC65Q8IXS2 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC2.26□□□□□ -2.05
CCDC65Q8IXS2 MTATP6P7-201ENST00000453315 681 ntBASIC2.26□□□□□ -2.05
CCDC65Q8IXS2 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC2.26□□□□□ -2.05
CCDC65Q8IXS2 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC2.26□□□□□ -2.05
CCDC65Q8IXS2 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC2.26□□□□□ -2.05
CCDC65Q8IXS2 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC2.26□□□□□ -2.05
CCDC65Q8IXS2 AP005902.1-201ENST00000521358 186 ntBASIC2.26□□□□□ -2.05
CCDC65Q8IXS2 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.26□□□□□ -2.05
CCDC65Q8IXS2 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC2.26□□□□□ -2.05
CCDC65Q8IXS2 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC2.26□□□□□ -2.05
CCDC65Q8IXS2 AC021739.1-201ENST00000559631 174 ntBASIC2.26□□□□□ -2.05
CCDC65Q8IXS2 AL391813.1-201ENST00000603098 260 ntBASIC2.26□□□□□ -2.05
CCDC65Q8IXS2 AC007363.1-201ENST00000604736 620 ntBASIC2.26□□□□□ -2.05
CCDC65Q8IXS2 uc_338.12-201ENST00000616344 181 ntBASIC2.26□□□□□ -2.05
CCDC65Q8IXS2 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.26□□□□□ -2.05
CCDC65Q8IXS2 AC091932.3-201ENST00000624223 323 ntBASIC2.26□□□□□ -2.05
CCDC65Q8IXS2 AC092192.1-201ENST00000633154 1018 ntBASIC2.26□□□□□ -2.05
CCDC65Q8IXS2 AC007671.2-201ENST00000637344 619 ntBASIC2.26□□□□□ -2.05
CCDC65Q8IXS2 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
CCDC65Q8IXS2 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
CCDC65Q8IXS2 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.26□□□□□ -2.05
CCDC65Q8IXS2 AC104454.1-201ENST00000421341 1401 ntBASIC2.25□□□□□ -2.05
CCDC65Q8IXS2 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.25□□□□□ -2.05
CCDC65Q8IXS2 RNU6-500P-201ENST00000362349 107 ntBASIC2.25□□□□□ -2.05
CCDC65Q8IXS2 SNORA72.3-201ENST00000365074 132 ntBASIC2.25□□□□□ -2.05
CCDC65Q8IXS2 RNY3P13-201ENST00000365542 102 ntBASIC2.25□□□□□ -2.05
CCDC65Q8IXS2 RNU6-253P-201ENST00000384730 105 ntBASIC2.25□□□□□ -2.05
CCDC65Q8IXS2 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.25□□□□□ -2.05
CCDC65Q8IXS2 RNU2-36P-201ENST00000410361 191 ntBASIC2.25□□□□□ -2.05
CCDC65Q8IXS2 AL139156.1-201ENST00000412785 841 ntBASIC2.25□□□□□ -2.05
CCDC65Q8IXS2 AC104651.1-201ENST00000427559 735 ntBASIC2.25□□□□□ -2.05
CCDC65Q8IXS2 AC027124.2-201ENST00000428249 105 ntBASIC2.25□□□□□ -2.05
CCDC65Q8IXS2 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC2.25□□□□□ -2.05
CCDC65Q8IXS2 Z98742.2-201ENST00000431564 187 ntBASIC2.25□□□□□ -2.05
CCDC65Q8IXS2 RPL37P21-201ENST00000435890 276 ntBASIC2.25□□□□□ -2.05
CCDC65Q8IXS2 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC2.25□□□□□ -2.05
CCDC65Q8IXS2 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC2.25□□□□□ -2.05
CCDC65Q8IXS2 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC2.25□□□□□ -2.05
CCDC65Q8IXS2 RNU6-717P-201ENST00000459076 104 ntBASIC2.25□□□□□ -2.05
CCDC65Q8IXS2 AL121769.1-201ENST00000469473 401 ntBASIC2.25□□□□□ -2.05
CCDC65Q8IXS2 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC2.25□□□□□ -2.05
CCDC65Q8IXS2 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC2.25□□□□□ -2.05
CCDC65Q8IXS2 AC023141.11-201ENST00000508864 202 ntBASIC2.25□□□□□ -2.05
CCDC65Q8IXS2 RN7SKP265-201ENST00000516448 223 ntBASIC2.25□□□□□ -2.05
CCDC65Q8IXS2 RNU7-193P-201ENST00000516723 65 ntBASIC2.25□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 112.1 ms